RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PLEKHH3Q7Z736 793 aa9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 ALYREFQ86V81 257 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 TRPV1Q8NER1 839 aa9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 BBXQ8WY36 941 aaPredicted RBP9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 GAS2L1Q99501 681 aaPredicted RBP9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 UTYO14607 1347 aa9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 FAM196BA6NMK8 535 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 USP17L5A8MUK1 530 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 HOXC6P09630 235 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 IFIT1P09914 478 aaKnown RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 CNGA1P29973 690 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 ZEB1P37275 1124 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 CAP2P40123 477 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 ERVK-24P63145 666 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 TLE2Q04725 743 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 PUM3Q15397 648 aaKnown RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 CCDC85BQ15834 202 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 RABL6Q3YEC7 729 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 ARRDC4Q8NCT1 418 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 IL27Q8NEV9 243 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 FAM163AQ96GL9 167 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 SUCLG2Q96I99 432 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 WDR18Q9BV38 432 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 PRDM12Q9H4Q4 367 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 C9orf78Q9NZ63 289 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 CXXC1Q9P0U4 656 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 TACC3Q9Y6A5 838 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 GAKO14976 1311 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 MYBBP1AQ9BQG0 1328 aaKnown RBP9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 SALL1Q9NSC2 1324 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 PLXNB2O15031 1838 aa9.21□□□□□ -0.94
SPTLC1-205ENST00000477888 KIAA0355O15063 1070 aa9.2□□□□□ -0.94
SPTLC1-205ENST00000477888 NBPF7P0C2Y1 421 aaPredicted RBP9.2□□□□□ -0.94
SPTLC1-205ENST00000477888 BACE1P56817 501 aa9.2□□□□□ -0.94
SPTLC1-205ENST00000477888 MTMR2Q13614 643 aa9.2□□□□□ -0.94
SPTLC1-205ENST00000477888 TMEM31Q5JXX7 168 aa9.2□□□□□ -0.94
SPTLC1-205ENST00000477888 PBX4Q9BYU1 374 aa9.2□□□□□ -0.94
SPTLC1-205ENST00000477888 GPR37L1O60883 481 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 VAMP4O75379 141 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 ALDH1L1O75891 902 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 CYBAP13498 195 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 CYP2C19P33261 490 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 PBX2P40425 430 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 ADCYAP1R1P41586 468 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 RHBDL3P58872 404 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 ATP2B2Q01814 1243 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 PICALMQ13492 652 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 CCAR1Q8IX12 1150 aaKnown RBP9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 NPLOC4Q8TAT6 608 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 KLHDC4Q8TBB5 520 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 LPIN2Q92539 896 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 AS3MTQ9HBK9 375 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 C11orf16Q9NQ32 467 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 CHD9Q3L8U1 2897 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 MAST2Q6P0Q8 1798 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 LTBP2Q14767 1821 aa9.19□□□□□ -0.94
SPTLC1-205ENST00000477888 SLC15A5A6NIM6 579 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 C19orf81C9J6K1 198 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 KBTBD13C9JR72 458 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 CNMDO75829 334 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 CLTBP09497 229 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 PTPREP23469 700 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 JAG1P78504 1218 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 TFF2Q03403 129 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 FPGSQ05932 587 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 RASIP1Q5U651 963 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 ANKRD44Q8N8A2 993 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 GTF3C2Q8WUA4 911 aaPredicted RBP9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 BICC1Q9H694 974 aaKnown RBP9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 TMOD4Q9NZQ9 345 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 RABGAP1Q9Y3P9 1069 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 NDUFB9Q9Y6M9 179 aa9.18□□□□□ -0.94
SPTLC1-205ENST00000477888 GPR75-ASB3A0A0A6YYF3 556 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 GRXCR1A8MXD5 290 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 GLRX3O76003 335 aaKnown RBP9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 SLC5A1P13866 664 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 RAG1P15918 1043 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 IGFBP4P22692 258 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 BTDP43251 543 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 KCNQ1P51787 676 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 GRB14Q14449 540 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 LRRC41Q15345 812 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 C16orf59Q7L2K0 433 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 FERMT2Q96AC1 680 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 PAGR1Q9BTK6 254 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 PTPRFP10586 1907 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 PHIPQ8WWQ0 1821 aa9.17□□□□□ -0.94
SPTLC1-205ENST00000477888 MUC6Q6W4X9 2439 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 SEMA3EO15041 775 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 SEPT4O43236 478 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 CCNA1P78396 465 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 AAK1Q2M2I8 961 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 ANO1Q5XXA6 986 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 TSPYL2Q9H2G4 693 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms