RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 FLT1P17948 1338 aa22.79■■□□□ 1.24
PRKCD-204ENST00000477794 C7orf61Q8IZ16 206 aa22.78■■□□□ 1.24
PRKCD-204ENST00000477794 CLUAP1Q96AJ1 413 aa22.78■■□□□ 1.24
PRKCD-204ENST00000477794 ZNF512BQ96KM6 892 aaPredicted RBP22.78■■□□□ 1.24
PRKCD-204ENST00000477794 C11orf49Q9H6J7 331 aa22.78■■□□□ 1.24
PRKCD-204ENST00000477794 STAP2Q9UGK3 403 aa22.78■■□□□ 1.24
PRKCD-204ENST00000477794 ZKSCAN1P17029 563 aaPredicted RBP22.77■■□□□ 1.24
PRKCD-204ENST00000477794 RRP1BQ14684 758 aaKnown RBP22.77■■□□□ 1.24
PRKCD-204ENST00000477794 ZKSCAN2Q63HK3 967 aa22.77■■□□□ 1.24
PRKCD-204ENST00000477794 TMED8Q6PL24 325 aaPredicted RBP22.77■■□□□ 1.24
PRKCD-204ENST00000477794 METTL16Q86W50 562 aaKnown RBP22.77■■□□□ 1.24
PRKCD-204ENST00000477794 DIS3LQ8TF46 1054 aaKnown RBP22.77■■□□□ 1.24
PRKCD-204ENST00000477794 ZBTB21Q9ULJ3 1066 aa22.77■■□□□ 1.24
PRKCD-204ENST00000477794 SURF6O75683 361 aaKnown RBP22.76■■□□□ 1.23
PRKCD-204ENST00000477794 GLRX3O76003 335 aaKnown RBP22.76■■□□□ 1.23
PRKCD-204ENST00000477794 PRKAR2AP13861 404 aaKnown RBP22.76■■□□□ 1.23
PRKCD-204ENST00000477794 CYP2B6P20813 491 aa22.76■■□□□ 1.23
PRKCD-204ENST00000477794 BMP8BP34820 402 aa22.76■■□□□ 1.23
PRKCD-204ENST00000477794 RGS2P41220 211 aa22.76■■□□□ 1.23
PRKCD-204ENST00000477794 TRIB2Q92519 343 aa22.76■■□□□ 1.23
PRKCD-204ENST00000477794 P2RX7Q99572 595 aaKnown RBP22.76■■□□□ 1.23
PRKCD-204ENST00000477794 PALD1Q9ULE6 856 aa22.76■■□□□ 1.23
PRKCD-204ENST00000477794 CCNA1P78396 465 aa22.75■■□□□ 1.23
PRKCD-204ENST00000477794 USP17L2Q6R6M4 530 aa22.75■■□□□ 1.23
PRKCD-204ENST00000477794 FEZ1Q99689 392 aa22.75■■□□□ 1.23
PRKCD-204ENST00000477794 DBNDD2Q9BQY9 259 aa22.75■■□□□ 1.23
PRKCD-204ENST00000477794 OGDHLQ9ULD0 1010 aa22.75■■□□□ 1.23
PRKCD-204ENST00000477794 DOCK3Q8IZD9 2030 aa22.75■■□□□ 1.23
PRKCD-204ENST00000477794 ATAD5Q96QE3 1844 aa22.75■■□□□ 1.23
PRKCD-204ENST00000477794 CYP2E1P05181 493 aaPredicted RBP22.74■■□□□ 1.23
PRKCD-204ENST00000477794 ERVK-9P63128 1117 aa22.74■■□□□ 1.23
PRKCD-204ENST00000477794 ERVK-24P63145 666 aa22.74■■□□□ 1.23
PRKCD-204ENST00000477794 POLA2Q14181 598 aa22.74■■□□□ 1.23
PRKCD-204ENST00000477794 GPR153Q6NV75 609 aa22.74■■□□□ 1.23
PRKCD-204ENST00000477794 FTSJ3Q8IY81 847 aaKnown RBP22.74■■□□□ 1.23
PRKCD-204ENST00000477794 SSH3Q8TE77 659 aa22.74■■□□□ 1.23
PRKCD-204ENST00000477794 MAST2Q6P0Q8 1798 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 BCAR3O75815 825 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 GDF11O95390 407 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 CYP7A1P22680 504 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 USP5P45974 858 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 ATP8B2P98198 1209 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 MAP3K21Q5TCX8 1036 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 PLEKHH3Q7Z736 793 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 GDF15Q99988 308 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 PAGR1Q9BTK6 254 aa22.73■■□□□ 1.23
PRKCD-204ENST00000477794 SAP30BPQ9UHR5 308 aaKnown RBP22.73■■□□□ 1.23
PRKCD-204ENST00000477794 IDH1O75874 414 aaKnown RBP22.72■■□□□ 1.23
PRKCD-204ENST00000477794 USP14P54578 494 aa22.72■■□□□ 1.23
PRKCD-204ENST00000477794 SLC17A8Q8NDX2 589 aa22.72■■□□□ 1.23
PRKCD-204ENST00000477794 APBA2Q99767 749 aa22.72■■□□□ 1.23
PRKCD-204ENST00000477794 DNAJC18Q9H819 358 aa22.72■■□□□ 1.23
PRKCD-204ENST00000477794 ZMYND8Q9ULU4 1186 aaPredicted RBP22.72■■□□□ 1.23
PRKCD-204ENST00000477794 ZAP70P43403 619 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 TRIM32Q13049 653 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 GPR142Q7Z601 462 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 ADGRA1Q86SQ6 560 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 TTC6Q86TZ1 520 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 TMEM57Q8N5G2 664 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 TXNRD2Q9NNW7 524 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 RBPJLQ9UBG7 517 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 SERPINB13Q9UIV8 391 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 RABGAP1Q9Y3P9 1069 aa22.71■■□□□ 1.23
PRKCD-204ENST00000477794 LAMA3Q16787 3333 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L15C9J2P7 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L13C9JLJ4 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L11C9JVI0 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L18D6R9N7 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L22D6RA61 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L17D6RBQ6 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L19D6RCP7 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L20D6RJB6 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 GH2P01242 217 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 USP17L24Q0WX57 530 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 MAP3K12Q12852 859 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 CABP5Q9NP86 173 aa22.7■■□□□ 1.22
PRKCD-204ENST00000477794 MFSD14CQ5VZR4 134 aa22.69■■□□□ 1.22
PRKCD-204ENST00000477794 C12orf42Q96LP6 360 aa22.69■■□□□ 1.22
PRKCD-204ENST00000477794 EHD4Q9H223 541 aa22.69■■□□□ 1.22
PRKCD-204ENST00000477794 PIH1D3Q9NQM4 214 aaKnown RBP22.69■■□□□ 1.22
PRKCD-204ENST00000477794 EMILIN3Q9NT22 766 aa22.69■■□□□ 1.22
PRKCD-204ENST00000477794 NOP58Q9Y2X3 529 aaKnown RBP22.69■■□□□ 1.22
PRKCD-204ENST00000477794 IVNS1ABPQ9Y6Y0 642 aa22.69■■□□□ 1.22
PRKCD-204ENST00000477794 SOX1O00570 391 aaPredicted RBP22.68■■□□□ 1.22
PRKCD-204ENST00000477794 JAG1P78504 1218 aa22.68■■□□□ 1.22
PRKCD-204ENST00000477794 CACNB2Q08289 660 aaPredicted RBP22.68■■□□□ 1.22
PRKCD-204ENST00000477794 ERC1Q8IUD2 1116 aa22.68■■□□□ 1.22
PRKCD-204ENST00000477794 LRCH3Q96II8 777 aa22.68■■□□□ 1.22
PRKCD-204ENST00000477794 DBNLQ9UJU6 430 aaKnown RBP22.68■■□□□ 1.22
PRKCD-204ENST00000477794 MAP2K5Q13163 448 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 RAB3GAP1Q15042 981 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 MORN1Q5T089 497 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 WDR78Q5VTH9 848 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 ITPRIPQ8IWB1 547 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 TDHQ8IZJ6 230 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 USP6NLQ92738 828 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 UBE2OQ9C0C9 1292 aaKnown RBP22.67■■□□□ 1.22
PRKCD-204ENST00000477794 KIAA1683Q9H0B3 1180 aa22.67■■□□□ 1.22
PRKCD-204ENST00000477794 PORCNQ9H237 461 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms