RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TEX11Q8IYF3 940 aa25.03■■□□□ 1.6
PDLIM1-202ENST00000477757 RBPJLQ9UBG7 517 aa25.03■■□□□ 1.6
PDLIM1-202ENST00000477757 HDAC5Q9UQL6 1122 aa25.03■■□□□ 1.6
PDLIM1-202ENST00000477757 AKAP2Q9Y2D5 859 aa25.03■■□□□ 1.6
PDLIM1-202ENST00000477757 PI16Q6UXB8 463 aa25.02■■□□□ 1.6
PDLIM1-202ENST00000477757 GPR142Q7Z601 462 aa25.02■■□□□ 1.6
PDLIM1-202ENST00000477757 FAM9BQ8IZU0 186 aa25.02■■□□□ 1.6
PDLIM1-202ENST00000477757 GTF3C2Q8WUA4 911 aaPredicted RBP25.02■■□□□ 1.6
PDLIM1-202ENST00000477757 PORCNQ9H237 461 aa25.02■■□□□ 1.6
PDLIM1-202ENST00000477757 PI4KBQ9UBF8 816 aa25.02■■□□□ 1.6
PDLIM1-202ENST00000477757 C19orf81C9J6K1 198 aa25.01■■□□□ 1.59
PDLIM1-202ENST00000477757 E9PSI1 815 aa25.01■■□□□ 1.59
PDLIM1-202ENST00000477757 ANP32CO43423 234 aa25.01■■□□□ 1.59
PDLIM1-202ENST00000477757 SPATA5Q8NB90 893 aa25.01■■□□□ 1.59
PDLIM1-202ENST00000477757 DHX36Q9H2U1 1008 aaKnown RBP25.01■■□□□ 1.59
PDLIM1-202ENST00000477757 SMC4Q9NTJ3 1288 aa25.01■■□□□ 1.59
PDLIM1-202ENST00000477757 JAG1P78504 1218 aa25■■□□□ 1.59
PDLIM1-202ENST00000477757 TFCP2Q12800 502 aa25■■□□□ 1.59
PDLIM1-202ENST00000477757 TBC1D9Q6ZT07 1266 aa25■■□□□ 1.59
PDLIM1-202ENST00000477757 PLEKHH3Q7Z736 793 aa25■■□□□ 1.59
PDLIM1-202ENST00000477757 LBHD1Q9BQE6 289 aaPredicted RBP25■■□□□ 1.59
PDLIM1-202ENST00000477757 DNAJC18Q9H819 358 aa25■■□□□ 1.59
PDLIM1-202ENST00000477757 RAI14Q9P0K7 980 aa25■■□□□ 1.59
PDLIM1-202ENST00000477757 LTBP2Q14767 1821 aa25■■□□□ 1.59
PDLIM1-202ENST00000477757 PRUNE2Q8WUY3 3088 aa24.99■■□□□ 1.59
PDLIM1-202ENST00000477757 Q3C1V9 767 aa24.99■■□□□ 1.59
PDLIM1-202ENST00000477757 POTEEQ6S8J3 1075 aa24.99■■□□□ 1.59
PDLIM1-202ENST00000477757 CCAR1Q8IX12 1150 aaKnown RBP24.99■■□□□ 1.59
PDLIM1-202ENST00000477757 SH3RF3Q8TEJ3 882 aaPredicted RBP24.99■■□□□ 1.59
PDLIM1-202ENST00000477757 FAM161BQ96MY7 647 aa24.99■■□□□ 1.59
PDLIM1-202ENST00000477757 USP17L10C9JJH3 530 aa24.98■■□□□ 1.59
PDLIM1-202ENST00000477757 ARID4AP29374 1257 aaPredicted RBP24.98■■□□□ 1.59
PDLIM1-202ENST00000477757 ZNF697Q5TEC3 545 aa24.98■■□□□ 1.59
PDLIM1-202ENST00000477757 METTL16Q86W50 562 aaKnown RBP24.98■■□□□ 1.59
PDLIM1-202ENST00000477757 PAGR1Q9BTK6 254 aa24.98■■□□□ 1.59
PDLIM1-202ENST00000477757 GINM1Q9NU53 330 aa24.98■■□□□ 1.59
PDLIM1-202ENST00000477757 MAP2K5Q13163 448 aa24.97■■□□□ 1.59
PDLIM1-202ENST00000477757 SHROOM1Q2M3G4 852 aaPredicted RBP24.97■■□□□ 1.59
PDLIM1-202ENST00000477757 ZBTB21Q9ULJ3 1066 aa24.97■■□□□ 1.59
PDLIM1-202ENST00000477757 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.97■■□□□ 1.59
PDLIM1-202ENST00000477757 FOCADQ5VW36 1801 aa24.97■■□□□ 1.59
PDLIM1-202ENST00000477757 CDK5RAP2Q96SN8 1893 aa24.96■■□□□ 1.59
PDLIM1-202ENST00000477757 MEIS3Q99687 375 aa24.96■■□□□ 1.59
PDLIM1-202ENST00000477757 NOL10Q9BSC4 688 aaKnown RBP24.96■■□□□ 1.59
PDLIM1-202ENST00000477757 SENP6Q9GZR1 1112 aaPredicted RBP24.96■■□□□ 1.59
PDLIM1-202ENST00000477757 FLT1P17948 1338 aa24.95■■□□□ 1.58
PDLIM1-202ENST00000477757 NEUROD6Q96NK8 337 aa24.95■■□□□ 1.58
PDLIM1-202ENST00000477757 SRGAP3O43295 1099 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 GDF11O95390 407 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 PLCG2P16885 1265 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 MCAMP43121 646 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 MTX1Q13505 466 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 GORABQ5T7V8 394 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 MFSD14CQ5VZR4 134 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 CRACR2BQ8N4Y2 399 aaPredicted RBP24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 CWC22Q9HCG8 908 aaKnown RBP24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 EMILIN3Q9NT22 766 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 LRP2BPQ9P2M1 347 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 DDX20Q9UHI6 824 aaKnown RBP24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 CDH23Q9H251 3354 aa24.94■■□□□ 1.58
PDLIM1-202ENST00000477757 MSCO60682 206 aa24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 GLRX3O76003 335 aaKnown RBP24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 FOXP4Q8IVH2 680 aaPredicted RBP24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 MAPKAPK5Q8IW41 473 aa24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 LPAR1Q92633 364 aa24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 EDC3Q96F86 508 aaKnown RBP24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 TRIM34Q9BYJ4 488 aa24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 AATFQ9NY61 560 aaKnown RBP eCLIP24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 FLRT1Q9NZU1 646 aa24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 RABGAP1Q9Y3P9 1069 aa24.93■■□□□ 1.58
PDLIM1-202ENST00000477757 TTC28Q96AY4 2481 aa24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 DNM1LO00429 736 aa24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 BAG3O95817 575 aa24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 CCNA1P78396 465 aa24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 SLFN5Q08AF3 891 aa24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 USP17L2Q6R6M4 530 aa24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 TGFBRAP1Q8WUH2 860 aa24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 CDX2Q99626 313 aaPredicted RBP24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 API5Q9BZZ5 524 aaKnown RBP24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 PRKAG2Q9UGJ0 569 aa24.92■■□□□ 1.58
PDLIM1-202ENST00000477757 SLC15A5A6NIM6 579 aa24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 CNMDO75829 334 aa24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 HOXC6P09630 235 aa24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 ATN1P54259 1190 aaPredicted RBP24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 RTP1P59025 263 aa24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 NAA16Q6N069 864 aaPredicted RBP24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 MAFAQ8NHW3 353 aaPredicted RBP24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 C12orf42Q96LP6 360 aa24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 NOB1Q9ULX3 412 aaKnown RBP24.91■■□□□ 1.58
PDLIM1-202ENST00000477757 UQCRFS1P1P0C7P4 283 aa24.9■■□□□ 1.58
PDLIM1-202ENST00000477757 PPP4CP60510 307 aa24.9■■□□□ 1.58
PDLIM1-202ENST00000477757 PALD1Q9ULE6 856 aa24.9■■□□□ 1.58
PDLIM1-202ENST00000477757 PTPREP23469 700 aa24.89■■□□□ 1.58
PDLIM1-202ENST00000477757 ADGRA1Q86SQ6 560 aa24.89■■□□□ 1.58
PDLIM1-202ENST00000477757 RLFQ13129 1914 aa24.88■■□□□ 1.57
PDLIM1-202ENST00000477757 GRB14Q14449 540 aa24.88■■□□□ 1.57
PDLIM1-202ENST00000477757 NDUFB9Q9Y6M9 179 aa24.88■■□□□ 1.57
PDLIM1-202ENST00000477757 ZNF236Q9UL36 1845 aa24.88■■□□□ 1.57
PDLIM1-202ENST00000477757 USP17L15C9J2P7 530 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 USP17L13C9JLJ4 530 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms