RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.29□□□□□ -0.28
NUP188-205ENST00000477069 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
NUP188-205ENST00000477069 TTC12Q9H892 705 aaPredicted RBP13.29□□□□□ -0.28
NUP188-205ENST00000477069 A0A087WWV3 80 aa13.28□□□□□ -0.28
NUP188-205ENST00000477069 KIAA2012Q0VF49 1180 aa13.28□□□□□ -0.28
NUP188-205ENST00000477069 GRIK5Q16478 980 aa13.28□□□□□ -0.28
NUP188-205ENST00000477069 IQCA1Q86XH1 822 aa13.28□□□□□ -0.28
NUP188-205ENST00000477069 DZIP1Q86YF9 867 aaKnown RBP13.28□□□□□ -0.28
NUP188-205ENST00000477069 PIBF1Q8WXW3 757 aa13.28□□□□□ -0.28
NUP188-205ENST00000477069 ERCC4Q92889 916 aaPredicted RBP13.28□□□□□ -0.28
NUP188-205ENST00000477069 RBM28Q9NW13 759 aaKnown RBP13.28□□□□□ -0.28
NUP188-205ENST00000477069 QSER1Q2KHR3 1735 aa13.28□□□□□ -0.28
NUP188-205ENST00000477069 PRPF3O43395 683 aaKnown RBP13.28□□□□□ -0.28
NUP188-205ENST00000477069 SERPINB2P05120 415 aa13.28□□□□□ -0.28
NUP188-205ENST00000477069 GNL2Q13823 731 aaKnown RBP13.28□□□□□ -0.28
NUP188-205ENST00000477069 JMYQ8N9B5 988 aa13.28□□□□□ -0.28
NUP188-205ENST00000477069 CUTAO60888 179 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 TPM3P06753 285 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 CALM1P0DP23 149 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 CALM2P0DP24 149 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 CALM3P0DP25 149 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 CDC25BP30305 580 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 DDR1Q08345 913 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 CATIPQ7Z7H3 387 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 BPIFA3Q9BQP9 254 aa13.27□□□□□ -0.28
NUP188-205ENST00000477069 KLRG2A4D1S0 409 aaPredicted RBP13.27□□□□□ -0.29
NUP188-205ENST00000477069 LDHBP07195 334 aaKnown RBP13.27□□□□□ -0.29
NUP188-205ENST00000477069 HOXA10P31260 410 aaPredicted RBP13.27□□□□□ -0.29
NUP188-205ENST00000477069 PPP4CP60510 307 aa13.27□□□□□ -0.29
NUP188-205ENST00000477069 TMTC3Q6ZXV5 915 aa13.27□□□□□ -0.29
NUP188-205ENST00000477069 ZNF804AQ7Z570 1209 aa13.27□□□□□ -0.29
NUP188-205ENST00000477069 CCDC82Q8N4S0 544 aa13.27□□□□□ -0.29
NUP188-205ENST00000477069 RPGRQ92834 1020 aaKnown RBP13.27□□□□□ -0.29
NUP188-205ENST00000477069 GPR101Q96P66 508 aaPredicted RBP13.27□□□□□ -0.29
NUP188-205ENST00000477069 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
NUP188-205ENST00000477069 PHF20Q9BVI0 1012 aa13.27□□□□□ -0.29
NUP188-205ENST00000477069 MORC2Q9Y6X9 1032 aaPredicted RBP13.27□□□□□ -0.29
NUP188-205ENST00000477069 CNTNAP5Q8WYK1 1306 aa13.27□□□□□ -0.29
NUP188-205ENST00000477069 NMT2O60551 498 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 IL1R1P14778 569 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 ST5P78524 1137 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 NR5A1Q13285 461 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
NUP188-205ENST00000477069 C12orf60Q5U649 245 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
NUP188-205ENST00000477069 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
NUP188-205ENST00000477069 USP17L8P0C7I0 530 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 NT5C2P49902 561 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 RILPL1Q5EBL4 403 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 RCSD1Q6JBY9 416 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 SH3RF3Q8TEJ3 882 aaPredicted RBP13.26□□□□□ -0.29
NUP188-205ENST00000477069 NAP1L5Q96NT1 182 aaPredicted RBP13.26□□□□□ -0.29
NUP188-205ENST00000477069 CLIC6Q96NY7 704 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 FBXO2Q9UK22 296 aaPredicted RBP13.26□□□□□ -0.29
NUP188-205ENST00000477069 COL11A2P13942 1736 aaPredicted RBP13.26□□□□□ -0.29
NUP188-205ENST00000477069 SYKP43405 635 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
NUP188-205ENST00000477069 DPCR1Q3MIW9 517 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 CEP57L1Q8IYX8 460 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 SPC24Q8NBT2 197 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 RTFDC1Q9BY42 306 aaPredicted RBP13.26□□□□□ -0.29
NUP188-205ENST00000477069 SPTLC3Q9NUV7 552 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 TUBE1Q9UJT0 475 aa13.26□□□□□ -0.29
NUP188-205ENST00000477069 GOLGA6L6A8MZA4 724 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 SLC3A2P08195 630 aaKnown RBP13.25□□□□□ -0.29
NUP188-205ENST00000477069 ATP2B4P23634 1241 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 GSTO1P78417 241 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 NPY5RQ15761 445 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 FAM47AQ5JRC9 791 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 PROM2Q8N271 834 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
NUP188-205ENST00000477069 CD209Q9NNX6 404 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
NUP188-205ENST00000477069 NLRP12P59046 1061 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 PDE4BQ07343 736 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 ELOA2Q8IYF1 753 aaPredicted RBP13.25□□□□□ -0.29
NUP188-205ENST00000477069 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
NUP188-205ENST00000477069 TNFRSF25Q93038 417 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 TRIM5Q9C035 493 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 MCM9Q9NXL9 1143 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 TAOK2Q9UL54 1235 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 MYH1P12882 1939 aa13.25□□□□□ -0.29
NUP188-205ENST00000477069 PTPREP23469 700 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 TERF1P54274 439 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 DIXDC1Q155Q3 683 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
NUP188-205ENST00000477069 ANKS1AQ92625 1134 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 MRFAP1L1Q96HT8 127 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 VPS54Q9P1Q0 977 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
NUP188-205ENST00000477069 PCDHB6Q9Y5E3 794 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 GOLGA6L19H0YKK7 550 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 UFL1O94874 794 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 CRAMP1Q96RY5 1269 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms