RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 CDAN1Q8IWY9 1227 aa21.03■□□□□ 0.96
SREBF1-211ENST00000476994 ZFPM1Q8IX07 1006 aa21.03■□□□□ 0.96
SREBF1-211ENST00000476994 WRNIP1Q96S55 665 aa21.03■□□□□ 0.96
SREBF1-211ENST00000476994 OSBPL5Q9H0X9 879 aaPredicted RBP21.03■□□□□ 0.96
SREBF1-211ENST00000476994 RBM8AQ9Y5S9 174 aaKnown RBP21.03■□□□□ 0.96
SREBF1-211ENST00000476994 ATRNL1Q5VV63 1379 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 SMIM22K7EJ46 135 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 ENTPD3O75355 529 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 CETPP11597 493 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 USP5P45974 858 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 EVX2Q03828 476 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 NECTIN1Q15223 517 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 SH3BP5LQ7L8J4 393 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 CD99L2Q8TCZ2 262 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 MS4A4AQ96JQ5 239 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 PTPN18Q99952 460 aa21.02■□□□□ 0.96
SREBF1-211ENST00000476994 SPDYE5A6NIY4 337 aa21.01■□□□□ 0.95
SREBF1-211ENST00000476994 EIF5BO60841 1220 aaKnown RBP21.01■□□□□ 0.95
SREBF1-211ENST00000476994 PICALMQ13492 652 aa21.01■□□□□ 0.95
SREBF1-211ENST00000476994 SBK1Q52WX2 424 aa21.01■□□□□ 0.95
SREBF1-211ENST00000476994 CTR9Q6PD62 1173 aa21.01■□□□□ 0.95
SREBF1-211ENST00000476994 KCNB2Q92953 911 aa21.01■□□□□ 0.95
SREBF1-211ENST00000476994 ZNF341Q9BYN7 854 aa21.01■□□□□ 0.95
SREBF1-211ENST00000476994 U3KPZ7 1027 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-211ENST00000476994 HSPA4P34932 840 aa21■□□□□ 0.95
SREBF1-211ENST00000476994 CNKSR2Q8WXI2 1034 aa21■□□□□ 0.95
SREBF1-211ENST00000476994 BRI3BPQ8WY22 251 aa21■□□□□ 0.95
SREBF1-211ENST00000476994 NACAP1Q9BZK3 213 aa21■□□□□ 0.95
SREBF1-211ENST00000476994 NBPF3Q9H094 633 aa21■□□□□ 0.95
SREBF1-211ENST00000476994 NAPBQ9H115 298 aa21■□□□□ 0.95
SREBF1-211ENST00000476994 PTPN22Q9Y2R2 807 aa21■□□□□ 0.95
SREBF1-211ENST00000476994 ROBO3Q96MS0 1386 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 CYP2D7A0A087X1C5 515 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 USP17L12C9JPN9 530 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 USP17L21D6R901 530 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 APPP05067 770 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 CYP2D6P10635 497 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 SNAPC2Q13487 334 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 KIF22Q14807 665 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 FAM151AQ8WW52 585 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 ZCCHC17Q9NP64 241 aaKnown RBP20.99■□□□□ 0.95
SREBF1-211ENST00000476994 MCM9Q9NXL9 1143 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 ARPP21Q9UBL0 812 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-211ENST00000476994 TAF6LQ9Y6J9 622 aa20.99■□□□□ 0.95
SREBF1-211ENST00000476994 RBBP6Q7Z6E9 1792 aaKnown RBP20.99■□□□□ 0.95
SREBF1-211ENST00000476994 GREB1LQ9C091 1923 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-211ENST00000476994 DDTLA6NHG4 134 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-211ENST00000476994 SLC34A2O95436 690 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 CYP21A2P08686 494 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 TDO2P48775 406 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 TCP10Q12799 353 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 PPIL2Q13356 520 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 C12orf60Q5U649 245 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 PRPF38BQ5VTL8 546 aaKnown RBP20.98■□□□□ 0.95
SREBF1-211ENST00000476994 CREB3L3Q68CJ9 461 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 ZKSCAN4Q969J2 545 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-211ENST00000476994 IL17RAQ96F46 866 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 SAP30BPQ9UHR5 308 aaKnown RBP20.98■□□□□ 0.95
SREBF1-211ENST00000476994 ANAPC4Q9UJX5 808 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 PALD1Q9ULE6 856 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 TACC3Q9Y6A5 838 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 SNCAIPQ9Y6H5 919 aa20.98■□□□□ 0.95
SREBF1-211ENST00000476994 ATAD5Q96QE3 1844 aa20.97■□□□□ 0.95
SREBF1-211ENST00000476994 SLC27A2O14975 620 aa20.97■□□□□ 0.95
SREBF1-211ENST00000476994 MIGA2Q7L4E1 593 aa20.97■□□□□ 0.95
SREBF1-211ENST00000476994 RASEFQ8IZ41 740 aa20.97■□□□□ 0.95
SREBF1-211ENST00000476994 CTNNA3Q9UI47 895 aa20.97■□□□□ 0.95
SREBF1-211ENST00000476994 KIAA0100Q14667 2235 aaKnown RBP20.96■□□□□ 0.95
SREBF1-211ENST00000476994 PLCD1P51178 756 aa20.96■□□□□ 0.95
SREBF1-211ENST00000476994 PPATQ06203 517 aa20.96■□□□□ 0.95
SREBF1-211ENST00000476994 PPARAQ07869 468 aa20.96■□□□□ 0.95
SREBF1-211ENST00000476994 NBPF11Q86T75 865 aa20.96■□□□□ 0.95
SREBF1-211ENST00000476994 RBM25P49756 843 aaKnown RBP20.95■□□□□ 0.94
SREBF1-211ENST00000476994 HAND2P61296 217 aa20.95■□□□□ 0.94
SREBF1-211ENST00000476994 GABPAQ06546 454 aa20.95■□□□□ 0.94
SREBF1-211ENST00000476994 TSGA10IPQ3SY00 556 aa20.95■□□□□ 0.94
SREBF1-211ENST00000476994 METTL16Q86W50 562 aaKnown RBP20.95■□□□□ 0.94
SREBF1-211ENST00000476994 TBC1D10CQ8IV04 446 aa20.95■□□□□ 0.94
SREBF1-211ENST00000476994 FAM43AQ8N2R8 423 aa20.95■□□□□ 0.94
SREBF1-211ENST00000476994 DDRGK1Q96HY6 314 aa20.95■□□□□ 0.94
SREBF1-211ENST00000476994 TMEM106CQ9BVX2 250 aa20.95■□□□□ 0.94
SREBF1-211ENST00000476994 IRF6O14896 467 aa20.94■□□□□ 0.94
SREBF1-211ENST00000476994 FGRP09769 529 aa20.94■□□□□ 0.94
SREBF1-211ENST00000476994 STOX1Q6ZVD7 989 aa20.94■□□□□ 0.94
SREBF1-211ENST00000476994 TBC1D32Q96NH3 1257 aa20.94■□□□□ 0.94
SREBF1-211ENST00000476994 EHD4Q9H223 541 aa20.94■□□□□ 0.94
SREBF1-211ENST00000476994 DHX36Q9H2U1 1008 aaKnown RBP20.94■□□□□ 0.94
SREBF1-211ENST00000476994 DNAJC18Q9H819 358 aa20.94■□□□□ 0.94
SREBF1-211ENST00000476994 MINDY4BA8MYZ0 360 aa20.93■□□□□ 0.94
SREBF1-211ENST00000476994 TLR2O60603 784 aa20.93■□□□□ 0.94
SREBF1-211ENST00000476994 SLURP2P0DP57 97 aa20.93■□□□□ 0.94
SREBF1-211ENST00000476994 CTDSPL2Q05D32 466 aa20.93■□□□□ 0.94
SREBF1-211ENST00000476994 IMMTQ16891 758 aaKnown RBP20.93■□□□□ 0.94
SREBF1-211ENST00000476994 SLC4A8Q2Y0W8 1093 aa20.93■□□□□ 0.94
SREBF1-211ENST00000476994 SLC9C1Q4G0N8 1177 aa20.93■□□□□ 0.94
SREBF1-211ENST00000476994 C22orf23Q9BZE7 217 aa20.93■□□□□ 0.94
SREBF1-211ENST00000476994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.93■□□□□ 0.948e-6■■■□□ 18.6
SREBF1-211ENST00000476994 SNX14Q9Y5W7 946 aa20.93■□□□□ 0.94
SREBF1-211ENST00000476994 CENPFP49454 3210 aa20.92■□□□□ 0.94
SREBF1-211ENST00000476994 BTBD19C9JJ37 291 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms