RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 ATP5JP18859 108 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 GCLCP48506 637 aaPredicted RBP21.8■■□□□ 1.08
ABCB1-204ENST00000476862 BACE1P56817 501 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 IRX3P78415 501 aaPredicted RBP21.8■■□□□ 1.08
ABCB1-204ENST00000476862 MTMR2Q13614 643 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 RRP1BQ14684 758 aaKnown RBP21.8■■□□□ 1.08
ABCB1-204ENST00000476862 TREML2Q5T2D2 321 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 ANKRD13CQ8N6S4 541 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 COA7Q96BR5 231 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 GPATCH3Q96I76 525 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 ZBTB21Q9ULJ3 1066 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 ZNF532Q9HCE3 1301 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 GRK4P32298 578 aa21.79■■□□□ 1.08
ABCB1-204ENST00000476862 UBXN2AP68543 259 aa21.79■■□□□ 1.08
ABCB1-204ENST00000476862 SH3D19Q5HYK7 790 aa21.79■■□□□ 1.08
ABCB1-204ENST00000476862 ZSCAN25Q6NSZ9 544 aa21.79■■□□□ 1.08
ABCB1-204ENST00000476862 CERKLQ49MI3 558 aaPredicted RBP21.78■■□□□ 1.08
ABCB1-204ENST00000476862 AMOTL1Q8IY63 956 aa21.78■■□□□ 1.08
ABCB1-204ENST00000476862 DDRGK1Q96HY6 314 aa21.78■■□□□ 1.08
ABCB1-204ENST00000476862 FEZ1Q99689 392 aa21.78■■□□□ 1.08
ABCB1-204ENST00000476862 EHD4Q9H223 541 aa21.78■■□□□ 1.08
ABCB1-204ENST00000476862 MCM9Q9NXL9 1143 aa21.78■■□□□ 1.08
ABCB1-204ENST00000476862 GH2P01242 217 aa21.77■■□□□ 1.08
ABCB1-204ENST00000476862 EN2P19622 333 aaPredicted RBP21.77■■□□□ 1.08
ABCB1-204ENST00000476862 CTGFP29279 349 aa21.77■■□□□ 1.08
ABCB1-204ENST00000476862 FAM110CQ1W6H9 321 aa21.77■■□□□ 1.08
ABCB1-204ENST00000476862 HAUS7Q99871 368 aa21.77■■□□□ 1.08
ABCB1-204ENST00000476862 RIOK1Q9BRS2 568 aaKnown RBP21.77■■□□□ 1.08
ABCB1-204ENST00000476862 ASCC2Q9H1I8 757 aaPredicted RBP21.77■■□□□ 1.08
ABCB1-204ENST00000476862 DNAJC18Q9H819 358 aa21.77■■□□□ 1.08
ABCB1-204ENST00000476862 TAOK2Q9UL54 1235 aa21.77■■□□□ 1.08
ABCB1-204ENST00000476862 SIPA1L1O43166 1804 aa21.77■■□□□ 1.08
ABCB1-204ENST00000476862 PRKCZQ05513 592 aa21.76■■□□□ 1.07
ABCB1-204ENST00000476862 RAB3GAP1Q15042 981 aa21.76■■□□□ 1.07
ABCB1-204ENST00000476862 ABCB5Q2M3G0 1257 aa21.76■■□□□ 1.07
ABCB1-204ENST00000476862 USP17L2Q6R6M4 530 aa21.76■■□□□ 1.07
ABCB1-204ENST00000476862 SLAIN1Q8ND83 568 aa21.76■■□□□ 1.07
ABCB1-204ENST00000476862 ZBTB47Q9UFB7 747 aaPredicted RBP21.76■■□□□ 1.07
ABCB1-204ENST00000476862 LOC285556D6RIA3 1793 aa21.75■■□□□ 1.07
ABCB1-204ENST00000476862 RBBP6Q7Z6E9 1792 aaKnown RBP21.75■■□□□ 1.07
ABCB1-204ENST00000476862 SMARCA5O60264 1052 aaPredicted RBP21.75■■□□□ 1.07
ABCB1-204ENST00000476862 PRPF38BQ5VTL8 546 aaKnown RBP21.75■■□□□ 1.07
ABCB1-204ENST00000476862 TATDN1Q6P1N9 297 aa21.75■■□□□ 1.07
ABCB1-204ENST00000476862 CCAR1Q8IX12 1150 aaKnown RBP21.75■■□□□ 1.07
ABCB1-204ENST00000476862 EDC3Q96F86 508 aaKnown RBP21.75■■□□□ 1.07
ABCB1-204ENST00000476862 ADD2P35612 726 aa21.74■■□□□ 1.07
ABCB1-204ENST00000476862 NKX2-3Q8TAU0 364 aa21.74■■□□□ 1.07
ABCB1-204ENST00000476862 ECHDC1Q9NTX5 307 aa21.74■■□□□ 1.07
ABCB1-204ENST00000476862 NAV1Q8NEY1 1877 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 MPHOSPH10O00566 681 aaKnown RBP21.73■■□□□ 1.07
ABCB1-204ENST00000476862 ADCY3O60266 1144 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 HOXA7P31268 230 aaPredicted RBP21.73■■□□□ 1.07
ABCB1-204ENST00000476862 FLT3LGP49771 235 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 PLCD1P51178 756 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 USP14P54578 494 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 GTF3C2Q8WUA4 911 aaPredicted RBP21.73■■□□□ 1.07
ABCB1-204ENST00000476862 SDR42E1Q8WUS8 393 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 DCTPP1Q9H773 170 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 ARMT1Q9H993 441 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 GABRQQ9UN88 632 aa21.73■■□□□ 1.07
ABCB1-204ENST00000476862 TCRBV5S4A2TA0A5A2 114 aa21.72■■□□□ 1.07
ABCB1-204ENST00000476862 JAG1P78504 1218 aa21.72■■□□□ 1.07
ABCB1-204ENST00000476862 ZYXQ15942 572 aaKnown RBP21.72■■□□□ 1.07
ABCB1-204ENST00000476862 LCORLQ8N3X6 602 aa21.72■■□□□ 1.07
ABCB1-204ENST00000476862 CWC22Q9HCG8 908 aaKnown RBP21.72■■□□□ 1.07
ABCB1-204ENST00000476862 ATP8A2Q9NTI2 1148 aa21.72■■□□□ 1.07
ABCB1-204ENST00000476862 MYH7P12883 1935 aa21.71■■□□□ 1.07
ABCB1-204ENST00000476862 MBD4O95243 580 aa21.71■■□□□ 1.07
ABCB1-204ENST00000476862 UBE3CQ15386 1083 aa21.71■■□□□ 1.07
ABCB1-204ENST00000476862 RNF208Q9H0X6 261 aa21.71■■□□□ 1.07
ABCB1-204ENST00000476862 DCP1AQ9NPI6 582 aaPredicted RBP21.71■■□□□ 1.07
ABCB1-204ENST00000476862 SWAP70Q9UH65 585 aa21.71■■□□□ 1.07
ABCB1-204ENST00000476862 DOCK3Q8IZD9 2030 aa21.7■■□□□ 1.06
ABCB1-204ENST00000476862 CCL5P13501 91 aa21.7■■□□□ 1.06
ABCB1-204ENST00000476862 HERVK_113P62684 666 aa21.7■■□□□ 1.06
ABCB1-204ENST00000476862 IRF5Q13568 498 aa21.7■■□□□ 1.06
ABCB1-204ENST00000476862 MTFR1Q15390 333 aa21.7■■□□□ 1.06
ABCB1-204ENST00000476862 SHROOM1Q2M3G4 852 aaPredicted RBP21.7■■□□□ 1.06
ABCB1-204ENST00000476862 LRRFIP1Q32MZ4 808 aaKnown RBP21.7■■□□□ 1.06
ABCB1-204ENST00000476862 GPRC5AQ8NFJ5 357 aa21.7■■□□□ 1.06
ABCB1-204ENST00000476862 PXYLP1Q8TE99 480 aa21.7■■□□□ 1.06
ABCB1-204ENST00000476862 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
ABCB1-204ENST00000476862 P2RX7Q99572 595 aaKnown RBP21.7■■□□□ 1.06
ABCB1-204ENST00000476862 TNRC18O15417 2968 aaPredicted RBP21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L15C9J2P7 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L13C9JLJ4 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L11C9JVI0 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L18D6R9N7 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L22D6RA61 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L17D6RBQ6 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L19D6RCP7 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L20D6RJB6 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 SHMT1P34896 483 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 RRP1P56182 461 aaKnown RBP21.68■■□□□ 1.06
ABCB1-204ENST00000476862 USP17L24Q0WX57 530 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 PAGR1Q9BTK6 254 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 EMILIN3Q9NT22 766 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 MORF4L1Q9UBU8 362 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 SLC4A4Q9Y6R1 1079 aa21.68■■□□□ 1.06
ABCB1-204ENST00000476862 MYH8P13535 1937 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms