RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 UPK3BL1B0FP48 263 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 UPK3BL2E5RIL1 263 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 GREM1O60565 184 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 CST3P01034 146 aaPredicted RBP6.07□□□□□ -1.44
ITGA4-208ENST00000476824 PLCG1P19174 1290 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 REC114Q7Z4M0 266 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 NBPF11Q86T75 865 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 TMEM87BQ96K49 555 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 KCNQ5Q9NR82 932 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 UBP1Q9NZI7 540 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 PLAGL2Q9UPG8 496 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 TACC3Q9Y6A5 838 aa6.07□□□□□ -1.44
ITGA4-208ENST00000476824 PRR33A8MZF0 331 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 DNAJA2O60884 412 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 CAP2P40123 477 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 OXCT1P55809 520 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 PDE4BQ07343 736 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 C9orf131Q5VYM1 1079 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 BRMS1Q9HCU9 246 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 REV1Q9UBZ9 1251 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 CCDC39Q9UFE4 941 aa6.06□□□□□ -1.44
ITGA4-208ENST00000476824 SUPT16HQ9Y5B9 1047 aaKnown RBP6.06□□□□□ -1.44
ITGA4-208ENST00000476824 HTR3BO95264 441 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 VAMP1P23763 118 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 CD96P40200 585 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 RACK1P63244 317 aaKnown RBP6.05□□□□□ -1.44
ITGA4-208ENST00000476824 BNIP3Q12983 259 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 MPP2Q14168 576 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 LETMD1Q6P1Q0 360 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 ZNF574Q6ZN55 896 aaPredicted RBP6.05□□□□□ -1.44
ITGA4-208ENST00000476824 ARHGAP27Q6ZUM4 889 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 CDH24Q86UP0 819 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 USP48Q86UV5 1035 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 MRPL41Q8IXM3 137 aaKnown RBP6.05□□□□□ -1.44
ITGA4-208ENST00000476824 RNF34Q969K3 372 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 BSDC1Q9NW68 430 aaPredicted RBP6.05□□□□□ -1.44
ITGA4-208ENST00000476824 KLHL3Q9UH77 587 aa6.05□□□□□ -1.44
ITGA4-208ENST00000476824 TPX2Q9ULW0 747 aaKnown RBP6.05□□□□□ -1.44
ITGA4-208ENST00000476824 OAS3Q9Y6K5 1087 aaKnown RBP6.05□□□□□ -1.44
ITGA4-208ENST00000476824 CHURC1-FNTBB4DL54 471 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 WNT11O96014 354 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 CEACAM5P06731 702 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 GP2P55259 537 aaKnown RBP6.04□□□□□ -1.44
ITGA4-208ENST00000476824 SEZ6Q53EL9 994 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 SLC6A19Q695T7 634 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 NPM2Q86SE8 214 aaKnown RBP6.04□□□□□ -1.44
ITGA4-208ENST00000476824 WFDC3Q8IUB2 231 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 MCATQ8IVS2 390 aaKnown RBP6.04□□□□□ -1.44
ITGA4-208ENST00000476824 MFSD2AQ8NA29 543 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 FAM13CQ8NE31 585 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 NETO1Q8TDF5 533 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 EAF1Q96JC9 268 aaPredicted RBP6.04□□□□□ -1.44
ITGA4-208ENST00000476824 PRDM5Q9NQX1 630 aaPredicted RBP6.04□□□□□ -1.44
ITGA4-208ENST00000476824 ADAM30Q9UKF2 790 aa6.04□□□□□ -1.44
ITGA4-208ENST00000476824 PRR36Q9H6K5 1346 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 SCAMP3O14828 347 aaKnown RBP6.03□□□□□ -1.44
ITGA4-208ENST00000476824 PRNPP04156 253 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 HDLBPQ00341 1268 aaKnown RBP6.03□□□□□ -1.44
ITGA4-208ENST00000476824 APOBRQ0VD83 1088 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 NKPD1Q17RQ9 610 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 CWF19L2Q2TBE0 894 aaKnown RBP6.03□□□□□ -1.44
ITGA4-208ENST00000476824 TMEM201Q5SNT2 666 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 SPRED2Q7Z698 418 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 METTL16Q86W50 562 aaKnown RBP6.03□□□□□ -1.44
ITGA4-208ENST00000476824 KIAA0825Q8IV33 1275 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 BCL7CQ8WUZ0 217 aaPredicted RBP6.03□□□□□ -1.44
ITGA4-208ENST00000476824 SPON2Q9BUD6 331 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 LRRC3Q9BY71 257 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 METTL5Q9NRN9 209 aaKnown RBP6.03□□□□□ -1.44
ITGA4-208ENST00000476824 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 ANGEL1Q9UNK9 670 aaKnown RBP6.03□□□□□ -1.44
ITGA4-208ENST00000476824 PCDHB14Q9Y5E9 798 aa6.03□□□□□ -1.44
ITGA4-208ENST00000476824 CBX7O95931 251 aa6.02□□□□□ -1.45
ITGA4-208ENST00000476824 CLCQ05315 142 aa6.02□□□□□ -1.45
ITGA4-208ENST00000476824 DIEXFQ68CQ4 756 aaKnown RBP6.02□□□□□ -1.45
ITGA4-208ENST00000476824 GK5Q6ZS86 529 aa6.02□□□□□ -1.45
ITGA4-208ENST00000476824 VSIG10LQ86VR7 867 aa6.02□□□□□ -1.45
ITGA4-208ENST00000476824 SPACA3Q8IXA5 215 aa6.02□□□□□ -1.45
ITGA4-208ENST00000476824 FLCNQ8NFG4 579 aa6.02□□□□□ -1.45
ITGA4-208ENST00000476824 DNAJB8Q8NHS0 232 aa6.02□□□□□ -1.45
ITGA4-208ENST00000476824 PPP1R13LQ8WUF5 828 aa6.02□□□□□ -1.45
ITGA4-208ENST00000476824 PAK6Q9NQU5 681 aaPredicted RBP6.02□□□□□ -1.45
ITGA4-208ENST00000476824 DDX41Q9UJV9 622 aaKnown RBP6.02□□□□□ -1.45
ITGA4-208ENST00000476824 GNAT3A8MTJ3 354 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 IGF2BP3O00425 579 aaKnown RBP eCLIP6.01□□□□□ -1.45
ITGA4-208ENST00000476824 MCM4P33991 863 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 IFI16Q16666 785 aaKnown RBP6.01□□□□□ -1.45
ITGA4-208ENST00000476824 SFRP5Q5T4F7 317 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 ABI1Q8IZP0 508 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 BAHD1Q8TBE0 780 aaPredicted RBP6.01□□□□□ -1.45
ITGA4-208ENST00000476824 NKD1Q969G9 470 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 ANTXR1Q9H6X2 564 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 MKNK2Q9HBH9 465 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 MAPK8IP1Q9UQF2 711 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 ROBO2Q9HCK4 1378 aa6.01□□□□□ -1.45
ITGA4-208ENST00000476824 CD8BP10966 210 aa6□□□□□ -1.45
ITGA4-208ENST00000476824 AOC3Q16853 763 aa6□□□□□ -1.45
ITGA4-208ENST00000476824 CDKAL1Q5VV42 579 aa6□□□□□ -1.45
ITGA4-208ENST00000476824 NT5DC4Q86YG4 428 aa6□□□□□ -1.45
ITGA4-208ENST00000476824 TP53INP2Q8IXH6 220 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms