RNA–Protein interactions for RNA: ENST00000476807.5

HDLBP-235, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,070 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-235ENST00000476807 CRACR2BQ8N4Y2 399 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-235ENST00000476807 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
HDLBP-235ENST00000476807 SAP30BPQ9UHR5 308 aaKnown RBP13.88□□□□□ -0.19
HDLBP-235ENST00000476807 EXOC6BQ9Y2D4 811 aa13.88□□□□□ -0.19
HDLBP-235ENST00000476807 ATAD5Q96QE3 1844 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 FARP2O94887 1054 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-235ENST00000476807 GDF11O95390 407 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 SGPL1O95470 568 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-235ENST00000476807 CERS3Q8IU89 383 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 ERC1Q8IUD2 1116 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 PANK1Q8TE04 598 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 TMOD4Q9NZQ9 345 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 MORF4L1Q9UBU8 362 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 TAOK2Q9UL54 1235 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 ZBTB21Q9ULJ3 1066 aa13.87□□□□□ -0.19
HDLBP-235ENST00000476807 COLQQ9Y215 455 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-235ENST00000476807 C19orf81C9J6K1 198 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 USP17L10C9JJH3 530 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 HOXA7P31268 230 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-235ENST00000476807 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDLBP-235ENST00000476807 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
HDLBP-235ENST00000476807 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-235ENST00000476807 AACSQ86V21 672 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 MAGEB6Q8N7X4 407 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 MIGA1Q8NAN2 632 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 DPF3Q92784 378 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 HTATIP2Q9BUP3 242 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 ANTXR1Q9H6X2 564 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 PAK6Q9NQU5 681 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-235ENST00000476807 NDUFB9Q9Y6M9 179 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 CEP290O15078 2479 aa13.86□□□□□ -0.19
HDLBP-235ENST00000476807 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
HDLBP-235ENST00000476807 CAPN2P17655 700 aa13.85□□□□□ -0.19
HDLBP-235ENST00000476807 USP5P45974 858 aa13.85□□□□□ -0.19
HDLBP-235ENST00000476807 MAP3K12Q12852 859 aa13.85□□□□□ -0.19
HDLBP-235ENST00000476807 DEFB118Q96PH6 123 aa13.85□□□□□ -0.19
HDLBP-235ENST00000476807 HMGCRP04035 888 aa13.84□□□□□ -0.19
HDLBP-235ENST00000476807 HERVK_113P62684 666 aa13.84□□□□□ -0.19
HDLBP-235ENST00000476807 HSP90AB4PQ58FF6 505 aa13.84□□□□□ -0.19
HDLBP-235ENST00000476807 P2RX7Q99572 595 aaKnown RBP13.84□□□□□ -0.19
HDLBP-235ENST00000476807 CRISPLD2Q9H0B8 497 aa13.84□□□□□ -0.19
HDLBP-235ENST00000476807 EHD4Q9H223 541 aa13.84□□□□□ -0.19
HDLBP-235ENST00000476807 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
HDLBP-235ENST00000476807 GJD2Q9UKL4 321 aa13.84□□□□□ -0.19
HDLBP-235ENST00000476807 CDK5RAP2Q96SN8 1893 aa13.84□□□□□ -0.19
HDLBP-235ENST00000476807 MYO5AQ9Y4I1 1855 aaKnown RBP13.84□□□□□ -0.19
HDLBP-235ENST00000476807 GH2P01242 217 aa13.83□□□□□ -0.2
HDLBP-235ENST00000476807 TFRCP02786 760 aaKnown RBP13.83□□□□□ -0.2
HDLBP-235ENST00000476807 TATDN1Q6P1N9 297 aa13.83□□□□□ -0.2
HDLBP-235ENST00000476807 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
HDLBP-235ENST00000476807 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
HDLBP-235ENST00000476807 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.2
HDLBP-235ENST00000476807 TXNRD2Q9NNW7 524 aa13.83□□□□□ -0.2
HDLBP-235ENST00000476807 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
HDLBP-235ENST00000476807 SERPINB13Q9UIV8 391 aa13.83□□□□□ -0.2
HDLBP-235ENST00000476807 PEX10O60683 326 aa13.82□□□□□ -0.2
HDLBP-235ENST00000476807 MS4A1P11836 297 aa13.82□□□□□ -0.2
HDLBP-235ENST00000476807 TTF1Q15361 905 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-235ENST00000476807 USP17L2Q6R6M4 530 aa13.82□□□□□ -0.2
HDLBP-235ENST00000476807 TTC6Q86TZ1 520 aa13.82□□□□□ -0.2
HDLBP-235ENST00000476807 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
HDLBP-235ENST00000476807 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-235ENST00000476807 C12orf42Q96LP6 360 aa13.82□□□□□ -0.2
HDLBP-235ENST00000476807 RIOK1Q9BRS2 568 aaKnown RBP13.82□□□□□ -0.2
HDLBP-235ENST00000476807 ERVK-9P63128 1117 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 ERVK-24P63145 666 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 TRIM32Q13049 653 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 CLASRPQ8N2M8 674 aaKnown RBP13.81□□□□□ -0.2
HDLBP-235ENST00000476807 SOCS4Q8WXH5 440 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 TRIB2Q92519 343 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 KIF1BPQ96EK5 621 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 FEZ1Q99689 392 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 RBPJLQ9UBG7 517 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 NR2E3Q9Y5X4 410 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 TRIOBPQ9H2D6 2365 aa13.81□□□□□ -0.2
HDLBP-235ENST00000476807 RANBP2P49792 3224 aaKnown RBP13.8□□□□□ -0.2
HDLBP-235ENST00000476807 DOCK3Q8IZD9 2030 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 MAGEB6P1A0A0J9YX57 407 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 PDE6AP16499 860 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 MAPK4P31152 587 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 PLCD1P51178 756 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 CERKLQ49MI3 558 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-235ENST00000476807 POTEEQ6S8J3 1075 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 RPAP2Q8IXW5 612 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-235ENST00000476807 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.8□□□□□ -0.2
HDLBP-235ENST00000476807 KIAA1683Q9H0B3 1180 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 PRO3102Q9H379 93 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 HMX1Q9NP08 348 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-235ENST00000476807 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
HDLBP-235ENST00000476807 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
HDLBP-235ENST00000476807 DDX60LQ5H9U9 1706 aaKnown RBP13.79□□□□□ -0.2
HDLBP-235ENST00000476807 APBB1O00213 710 aa13.79□□□□□ -0.2
HDLBP-235ENST00000476807 HMMRO75330 724 aa13.79□□□□□ -0.2
HDLBP-235ENST00000476807 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
HDLBP-235ENST00000476807 CYP2B6P20813 491 aa13.79□□□□□ -0.2
HDLBP-235ENST00000476807 SHMT1P34896 483 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms