RNA–Protein interactions for RNA: ENST00000476744.5

CCNL1-218, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-218ENST00000476744 KRT25Q7Z3Z0 450 aa9.4□□□□□ -0.9
CCNL1-218ENST00000476744 RGL4Q8IZJ4 473 aa9.4□□□□□ -0.9
CCNL1-218ENST00000476744 DCAF5Q96JK2 942 aa9.4□□□□□ -0.9
CCNL1-218ENST00000476744 ARID3AQ99856 593 aa9.4□□□□□ -0.9
CCNL1-218ENST00000476744 USP26Q9BXU7 913 aa9.4□□□□□ -0.9
CCNL1-218ENST00000476744 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.9
CCNL1-218ENST00000476744 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
CCNL1-218ENST00000476744 NOP53Q9NZM5 478 aaKnown RBP9.4□□□□□ -0.9
CCNL1-218ENST00000476744 RTCBQ9Y3I0 505 aaKnown RBP9.4□□□□□ -0.9
CCNL1-218ENST00000476744 LRP6O75581 1613 aa9.4□□□□□ -0.9
CCNL1-218ENST00000476744 CICQ96RK0 1608 aaPredicted RBP9.4□□□□□ -0.9
CCNL1-218ENST00000476744 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
CCNL1-218ENST00000476744 OPLAHO14841 1288 aa9.39□□□□□ -0.91
CCNL1-218ENST00000476744 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
CCNL1-218ENST00000476744 ALDH1L1O75891 902 aa9.39□□□□□ -0.91
CCNL1-218ENST00000476744 BEND3Q5T5X7 828 aa9.39□□□□□ -0.91
CCNL1-218ENST00000476744 ETFBKMTQ8IXQ9 262 aa9.39□□□□□ -0.91
CCNL1-218ENST00000476744 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
CCNL1-218ENST00000476744 OTUD7AQ8TE49 926 aaPredicted RBP9.39□□□□□ -0.91
CCNL1-218ENST00000476744 LRRC59Q96AG4 307 aaKnown RBP9.39□□□□□ -0.91
CCNL1-218ENST00000476744 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
CCNL1-218ENST00000476744 LRRCC1Q9C099 1032 aa9.39□□□□□ -0.91
CCNL1-218ENST00000476744 DBF4Q9UBU7 674 aaPredicted RBP9.39□□□□□ -0.91
CCNL1-218ENST00000476744 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
CCNL1-218ENST00000476744 ITGB4P16144 1822 aa9.39□□□□□ -0.91
CCNL1-218ENST00000476744 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
CCNL1-218ENST00000476744 SPEF2Q9C093 1822 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 SPATA31A3Q5VYP0 1347 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 KCPQ6ZWJ8 1503 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 M0R082 166 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 REC8O95072 547 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 TEFQ10587 303 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 ZNF417Q8TAU3 575 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 DNAAF4Q8WXU2 420 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 ZNF587Q96SQ5 575 aaPredicted RBP9.38□□□□□ -0.91
CCNL1-218ENST00000476744 SLKQ9H2G2 1235 aaPredicted RBP9.38□□□□□ -0.91
CCNL1-218ENST00000476744 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 C11orf16Q9NQ32 467 aa9.38□□□□□ -0.91
CCNL1-218ENST00000476744 DNAJB12Q9NXW2 375 aaKnown RBP9.38□□□□□ -0.91
CCNL1-218ENST00000476744 LRRFIP2Q9Y608 721 aaKnown RBP9.38□□□□□ -0.91
CCNL1-218ENST00000476744 COL5A2P05997 1499 aaPredicted RBP9.37□□□□□ -0.91
CCNL1-218ENST00000476744 TMEM88BA6NKF7 163 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 BTBD11A6QL63 1104 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 TNFRSF10BO14763 440 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 UBTFL1P0CB47 393 aaPredicted RBP9.37□□□□□ -0.91
CCNL1-218ENST00000476744 RARAP10276 462 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 MX1P20591 662 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 MCM4P33991 863 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 ANAPC15P60006 121 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 RAB3GAP1Q15042 981 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 CASC1Q6TDU7 716 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 SLC4A10Q6U841 1118 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 ALYREFQ86V81 257 aaKnown RBP9.37□□□□□ -0.91
CCNL1-218ENST00000476744 C16orf71Q8IYS4 520 aaPredicted RBP9.37□□□□□ -0.91
CCNL1-218ENST00000476744 PHAXQ9H814 394 aaKnown RBP9.37□□□□□ -0.91
CCNL1-218ENST00000476744 CHPF2Q9P2E5 772 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 SLC6A14Q9UN76 642 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 TNS2Q63HR2 1409 aa9.37□□□□□ -0.91
CCNL1-218ENST00000476744 ERC2O15083 957 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 SMARCA5O60264 1052 aaPredicted RBP9.36□□□□□ -0.91
CCNL1-218ENST00000476744 SASH3O75995 380 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 ALBP02768 609 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 GPAT2Q6NUI2 795 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 FAM13BQ9NYF5 915 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 STIM2Q9P246 746 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 SEPT3Q9UH03 358 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 HDAC5Q9UQL6 1122 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 STARD13Q9Y3M8 1113 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 COL14A1Q05707 1796 aaKnown RBP9.36□□□□□ -0.91
CCNL1-218ENST00000476744 MYH3P11055 1940 aa9.36□□□□□ -0.91
CCNL1-218ENST00000476744 KCNQ3O43525 872 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 XYLBO75191 536 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 CYP2E1P05181 493 aaPredicted RBP9.35□□□□□ -0.91
CCNL1-218ENST00000476744 PHKG2P15735 406 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 ATF3P18847 181 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 PTMSP20962 102 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 TARSP26639 723 aaKnown RBP9.35□□□□□ -0.91
CCNL1-218ENST00000476744 COL8A1P27658 744 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 HSP90AB4PQ58FF6 505 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 KSR2Q6VAB6 950 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 LRP10Q7Z4F1 713 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 MICALL1Q8N3F8 863 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 SLC52A2Q9HAB3 445 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 DDX21Q9NR30 783 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCNL1-218ENST00000476744 HYPKQ9NX55 129 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 ZFATQ9P243 1243 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 EXOC6BQ9Y2D4 811 aa9.35□□□□□ -0.91
CCNL1-218ENST00000476744 TTC41PQ6P2S7 1318 aa9.34□□□□□ -0.91
CCNL1-218ENST00000476744 PI4KAP2A4QPH2 592 aa9.34□□□□□ -0.91
CCNL1-218ENST00000476744 MAP3K6O95382 1288 aa9.34□□□□□ -0.91
CCNL1-218ENST00000476744 ARID4AP29374 1257 aaPredicted RBP9.34□□□□□ -0.91
CCNL1-218ENST00000476744 PCSK7Q16549 785 aa9.34□□□□□ -0.91
CCNL1-218ENST00000476744 FAM26DQ5JW98 314 aa9.34□□□□□ -0.91
CCNL1-218ENST00000476744 MPRIPQ6WCQ1 1025 aa9.34□□□□□ -0.91
CCNL1-218ENST00000476744 DHX32Q7L7V1 743 aaKnown RBP9.34□□□□□ -0.91
CCNL1-218ENST00000476744 PPP1R42Q7Z4L9 355 aa9.34□□□□□ -0.91
CCNL1-218ENST00000476744 PI4KAP1Q8N8J0 262 aa9.34□□□□□ -0.91
CCNL1-218ENST00000476744 PI4K2BQ8TCG2 481 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms