RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 DYNC1LI2O43237 492 aaPredicted RBP5.37□□□□□ -1.55
NPHP3-207ENST00000476742 CILPO75339 1184 aa5.37□□□□□ -1.55
NPHP3-207ENST00000476742 F13A1P00488 732 aa5.37□□□□□ -1.55
NPHP3-207ENST00000476742 FANCCQ00597 558 aa5.37□□□□□ -1.55
NPHP3-207ENST00000476742 SEZ6L2Q6UXD5 910 aa5.37□□□□□ -1.55
NPHP3-207ENST00000476742 USP48Q86UV5 1035 aa5.37□□□□□ -1.55
NPHP3-207ENST00000476742 C1GALT1Q9NS00 363 aa5.37□□□□□ -1.55
NPHP3-207ENST00000476742 KIAA1522Q9P206 1035 aaPredicted RBP5.37□□□□□ -1.55
NPHP3-207ENST00000476742 LEMD3Q9Y2U8 911 aa5.37□□□□□ -1.55
NPHP3-207ENST00000476742 ROBO2Q9HCK4 1378 aa5.37□□□□□ -1.55
NPHP3-207ENST00000476742 FAM221AA4D161 298 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 F13BP05160 661 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 PGRP06401 933 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 GRK4P32298 578 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 ADMP35318 185 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 CDK8P49336 464 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 RBM25P49756 843 aaKnown RBP5.36□□□□□ -1.55
NPHP3-207ENST00000476742 CDK5R2Q13319 367 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 MPP2Q14168 576 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 FBXL19Q6PCT2 694 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 OGFOD3Q6PK18 319 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 DBX2Q6ZNG2 339 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 TTLL10Q6ZVT0 673 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 HID1Q8IV36 788 aa5.36□□□□□ -1.55
NPHP3-207ENST00000476742 ZNF296Q8WUU4 475 aaPredicted RBP5.36□□□□□ -1.55
NPHP3-207ENST00000476742 FAM170BA6NMN3 283 aa5.35□□□□□ -1.55
NPHP3-207ENST00000476742 FARP2O94887 1054 aaPredicted RBP5.35□□□□□ -1.55
NPHP3-207ENST00000476742 LRIG2O94898 1065 aa5.35□□□□□ -1.55
NPHP3-207ENST00000476742 FAM87AP0C7U9 286 aa5.35□□□□□ -1.55
NPHP3-207ENST00000476742 NTF4P34130 210 aa5.35□□□□□ -1.55
NPHP3-207ENST00000476742 CWF19L2Q2TBE0 894 aaKnown RBP5.35□□□□□ -1.55
NPHP3-207ENST00000476742 FAM196AQ6ZSG2 479 aa5.35□□□□□ -1.55
NPHP3-207ENST00000476742 KIAA0825Q8IV33 1275 aa5.35□□□□□ -1.55
NPHP3-207ENST00000476742 KCNQ5Q9NR82 932 aa5.35□□□□□ -1.55
NPHP3-207ENST00000476742 PIM2Q9P1W9 311 aa5.35□□□□□ -1.55
NPHP3-207ENST00000476742 TLR3O15455 904 aaKnown RBP5.34□□□□□ -1.55
NPHP3-207ENST00000476742 GARTP22102 1010 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 MLECQ14165 292 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 ZNF765Q7L2R6 523 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 ARMCX6Q7L4S7 300 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 ZNF654Q8IZM8 581 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 TOP6BLQ8N6T0 577 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 GATA6Q92908 595 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 SPON2Q9BUD6 331 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 FOXQ1Q9C009 403 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 PRDM10Q9NQV6 1147 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 ADAMTS1Q9UHI8 967 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 ADAM30Q9UKF2 790 aa5.34□□□□□ -1.55
NPHP3-207ENST00000476742 PRR19A6NJB7 356 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 CYP26A1O43174 497 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 GREM1O60565 184 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 PLCG1P19174 1290 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 APOBRQ0VD83 1088 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 SLBPQ14493 270 aaKnown RBP eCLIP5.33□□□□□ -1.56
NPHP3-207ENST00000476742 ZNF394Q53GI3 561 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 SLC6A19Q695T7 634 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 REC114Q7Z4M0 266 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 CILP2Q8IUL8 1156 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 MFSD2AQ8NA29 543 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 DUSP23Q9BVJ7 150 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 NT5C1AQ9BXI3 368 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 LRRC3Q9BY71 257 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 FBRSQ9HAH7 460 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 GTF2IRD1Q9UHL9 959 aa5.33□□□□□ -1.56
NPHP3-207ENST00000476742 E9PSI1 815 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 CST3P01034 146 aaPredicted RBP5.32□□□□□ -1.56
NPHP3-207ENST00000476742 FOSL1P15407 271 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 CAP2P40123 477 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 NKG7Q16617 165 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 ARHGAP27Q6ZUM4 889 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 UBE3DQ7Z6J8 389 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 NT5DC4Q86YG4 428 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 MCATQ8IVS2 390 aaKnown RBP5.32□□□□□ -1.56
NPHP3-207ENST00000476742 MRPL41Q8IXM3 137 aaKnown RBP5.32□□□□□ -1.56
NPHP3-207ENST00000476742 SHISA5Q8N114 240 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 FBXO27Q8NI29 283 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 NKD1Q969G9 470 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 ZNF428Q96B54 188 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 LRRC4CQ9HCJ2 640 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 UBP1Q9NZI7 540 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 DDX41Q9UJV9 622 aaKnown RBP5.32□□□□□ -1.56
NPHP3-207ENST00000476742 PCDHGB7Q9Y5F8 929 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 CORINQ9Y5Q5 1042 aa5.32□□□□□ -1.56
NPHP3-207ENST00000476742 PRR36Q9H6K5 1346 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 GRIN3BO60391 1043 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 MCM4P33991 863 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 ZNF165P49910 485 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 YARSP54577 528 aaKnown RBP5.31□□□□□ -1.56
NPHP3-207ENST00000476742 HDLBPQ00341 1268 aaKnown RBP5.31□□□□□ -1.56
NPHP3-207ENST00000476742 SEZ6Q53EL9 994 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 TMEM201Q5SNT2 666 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 PRAMEF13Q5VWM6 474 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 C9orf131Q5VYM1 1079 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 ZNF746Q6NUN9 644 aaPredicted RBP5.31□□□□□ -1.56
NPHP3-207ENST00000476742 METTL16Q86W50 562 aaKnown RBP5.31□□□□□ -1.56
NPHP3-207ENST00000476742 LSRQ86X29 649 aaPredicted RBP5.31□□□□□ -1.56
NPHP3-207ENST00000476742 TMEM87BQ96K49 555 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 MIPEPQ99797 713 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 BRMS1Q9HCU9 246 aa5.31□□□□□ -1.56
NPHP3-207ENST00000476742 TJP2Q9UDY2 1190 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms