RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZNF384Q8TF68 577 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 CRAMP1Q96RY5 1269 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 BRIP1Q9BX63 1249 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 TOMM22Q9NS69 142 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 PARP3Q9Y6F1 533 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 LRRC37AA6NMS7 1700 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 MAGEB6P1A0A0J9YX57 407 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 SMTNL1A8MU46 457 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 RRP12Q5JTH9 1297 aaKnown RBP18.97■□□□□ 0.63
TMEM53-208ENST00000476724 MYL10Q9BUA6 226 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 SEMA3EO15041 775 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 BBOX1O75936 387 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 DEXIO95424 95 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 MARCKSP29966 332 aaPredicted RBP18.96■□□□□ 0.63
TMEM53-208ENST00000476724 DEFB132Q7Z7B7 95 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 LRRC8AQ8IWT6 810 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 CACTINQ8WUQ7 758 aaKnown RBP18.96■□□□□ 0.63
TMEM53-208ENST00000476724 LTBP1Q14766 1721 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 MMP1P03956 469 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 SRGNP10124 158 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 PCP11498 1178 aaKnown RBP18.96■□□□□ 0.63
TMEM53-208ENST00000476724 LRMPQ12912 555 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 DHX8Q14562 1220 aaKnown RBP18.96■□□□□ 0.63
TMEM53-208ENST00000476724 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 ELOA2Q8IYF1 753 aaPredicted RBP18.96■□□□□ 0.63
TMEM53-208ENST00000476724 ESR2Q92731 530 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 UBAC1Q9BSL1 405 aa18.96■□□□□ 0.63
TMEM53-208ENST00000476724 FOXP1Q9H334 677 aaPredicted RBP18.96■□□□□ 0.63
TMEM53-208ENST00000476724 CCDC144BQ3MJ40 725 aa18.95■□□□□ 0.62
TMEM53-208ENST00000476724 RESP18Q5W5W9 173 aa18.95■□□□□ 0.62
TMEM53-208ENST00000476724 ERCC4Q92889 916 aaPredicted RBP18.95■□□□□ 0.62
TMEM53-208ENST00000476724 IMPACTQ9P2X3 320 aa18.95■□□□□ 0.62
TMEM53-208ENST00000476724 TUBE1Q9UJT0 475 aa18.95■□□□□ 0.62
TMEM53-208ENST00000476724 QSER1Q2KHR3 1735 aa18.95■□□□□ 0.62
TMEM53-208ENST00000476724 UFL1O94874 794 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 GSDMDP57764 484 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 DPCR1Q3MIW9 517 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 SHC4Q6S5L8 630 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 CRACR2BQ8N4Y2 399 aaPredicted RBP18.94■□□□□ 0.62
TMEM53-208ENST00000476724 FANCBQ8NB91 859 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 STK32BQ9NY57 414 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 PDS5AQ29RF7 1337 aaKnown RBP18.94■□□□□ 0.62
TMEM53-208ENST00000476724 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.94■□□□□ 0.62
TMEM53-208ENST00000476724 PPEF1O14829 653 aaPredicted RBP18.94■□□□□ 0.62
TMEM53-208ENST00000476724 IKBKBO14920 756 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 PRDX5P30044 214 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 RILPL1Q5EBL4 403 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 ZNF654Q8IZM8 581 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 PDGFDQ9GZP0 370 aaPredicted RBP18.94■□□□□ 0.62
TMEM53-208ENST00000476724 FAM13BQ9NYF5 915 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 POLLQ9UGP5 575 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 CCDC88AQ3V6T2 1871 aa18.94■□□□□ 0.62
TMEM53-208ENST00000476724 MROH7-TTC4A0A0A0MT08 1334 aa18.93■□□□□ 0.62
TMEM53-208ENST00000476724 TMED8Q6PL24 325 aaPredicted RBP18.93■□□□□ 0.62
TMEM53-208ENST00000476724 OLFM4Q6UX06 510 aa18.93■□□□□ 0.62
TMEM53-208ENST00000476724 NBPF11Q86T75 865 aa18.93■□□□□ 0.62
TMEM53-208ENST00000476724 RIOK1Q9BRS2 568 aaKnown RBP18.93■□□□□ 0.62
TMEM53-208ENST00000476724 ATP2B4P23634 1241 aa18.93■□□□□ 0.62
TMEM53-208ENST00000476724 KRI1Q8N9T8 703 aaKnown RBP18.93■□□□□ 0.62
TMEM53-208ENST00000476724 NSUN4Q96CB9 384 aaKnown RBP18.93■□□□□ 0.62
TMEM53-208ENST00000476724 ZKSCAN3Q9BRR0 538 aa18.93■□□□□ 0.62
TMEM53-208ENST00000476724 GGA1Q9UJY5 639 aa18.93■□□□□ 0.62
TMEM53-208ENST00000476724 A0A087WWV3 80 aa18.92■□□□□ 0.62
TMEM53-208ENST00000476724 DYNLL1P63167 89 aaKnown RBP18.92■□□□□ 0.62
TMEM53-208ENST00000476724 RBM10P98175 930 aaKnown RBP18.92■□□□□ 0.62
TMEM53-208ENST00000476724 MECOMQ03112 1051 aa18.92■□□□□ 0.62
TMEM53-208ENST00000476724 SEC23AQ15436 765 aa18.92■□□□□ 0.62
TMEM53-208ENST00000476724 C15orf52Q6ZUT6 534 aaKnown RBP18.92■□□□□ 0.62
TMEM53-208ENST00000476724 DIS3L2Q8IYB7 885 aaKnown RBP18.92■□□□□ 0.62
TMEM53-208ENST00000476724 TBC1D16Q8TBP0 767 aa18.92■□□□□ 0.62
TMEM53-208ENST00000476724 NOL10Q9BSC4 688 aaKnown RBP18.92■□□□□ 0.62
TMEM53-208ENST00000476724 RNF26Q9BY78 433 aaPredicted RBP18.92■□□□□ 0.62
TMEM53-208ENST00000476724 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
TMEM53-208ENST00000476724 HOOK1Q9UJC3 728 aaKnown RBP18.92■□□□□ 0.62
TMEM53-208ENST00000476724 MAST2Q6P0Q8 1798 aa18.92■□□□□ 0.62
TMEM53-208ENST00000476724 MINDY4BA8MYZ0 360 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 NPR1P16066 1061 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 PDE6BP35913 854 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 OSBPL5Q9H0X9 879 aaPredicted RBP18.91■□□□□ 0.62
TMEM53-208ENST00000476724 BTBD18B2RXH4 712 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 FGRP09769 529 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 XBP1P17861 261 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 ZNF804AQ7Z570 1209 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 SP8Q8IXZ3 490 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 SDR42E1Q8WUS8 393 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 CEP131Q9UPN4 1083 aa18.91■□□□□ 0.62
TMEM53-208ENST00000476724 MYO1BO43795 1136 aa18.9■□□□□ 0.62
TMEM53-208ENST00000476724 GUCY1A2P33402 732 aa18.9■□□□□ 0.62
TMEM53-208ENST00000476724 FBXW7Q969H0 707 aa18.9■□□□□ 0.62
TMEM53-208ENST00000476724 KCNH3Q9ULD8 1083 aa18.9■□□□□ 0.62
TMEM53-208ENST00000476724 ATP6V0A2Q9Y487 856 aa18.9■□□□□ 0.62
TMEM53-208ENST00000476724 MORC2Q9Y6X9 1032 aaPredicted RBP18.9■□□□□ 0.62
TMEM53-208ENST00000476724 TNKSO95271 1327 aa18.9■□□□□ 0.62
TMEM53-208ENST00000476724 BAZ2AQ9UIF9 1905 aaKnown RBP18.9■□□□□ 0.62
TMEM53-208ENST00000476724 ZBTB22O15209 634 aa18.89■□□□□ 0.62
TMEM53-208ENST00000476724 BAG6P46379 1132 aa18.89■□□□□ 0.62
TMEM53-208ENST00000476724 AKAP17AQ02040 695 aaKnown RBP18.89■□□□□ 0.62
TMEM53-208ENST00000476724 GRIK5Q16478 980 aa18.89■□□□□ 0.62
TMEM53-208ENST00000476724 KRBA2Q6ZNG9 492 aa18.89■□□□□ 0.62
TMEM53-208ENST00000476724 ZNF579Q8NAF0 562 aaKnown RBP18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms