RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 KBTBD3Q8NAB2 608 aa12.29□□□□□ -0.44
CCM2-208ENST00000476594 EDC3Q96F86 508 aaKnown RBP12.29□□□□□ -0.44
CCM2-208ENST00000476594 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
CCM2-208ENST00000476594 ZBTB21Q9ULJ3 1066 aa12.29□□□□□ -0.44
CCM2-208ENST00000476594 PTPN22Q9Y2R2 807 aa12.29□□□□□ -0.44
CCM2-208ENST00000476594 ATAD5Q96QE3 1844 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 NAV1Q8NEY1 1877 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 USP17L10C9JJH3 530 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 GDF11O95390 407 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 MX1P20591 662 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 GCLCP48506 637 aaPredicted RBP12.28□□□□□ -0.44
CCM2-208ENST00000476594 USP14P54578 494 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 HMGCS2P54868 508 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 FCGRTP55899 365 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 BACE1P56817 501 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
CCM2-208ENST00000476594 MOGSQ13724 837 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 SLC4A8Q2Y0W8 1093 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 SH3D19Q5HYK7 790 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 ANKRD45Q5TZF3 282 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 GPAT2Q6NUI2 795 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 TATDN1Q6P1N9 297 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 C17orf99Q6UX52 265 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 LCORLQ8N3X6 602 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 FEZ1Q99689 392 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 DNAJC18Q9H819 358 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 ARMT1Q9H993 441 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
CCM2-208ENST00000476594 CPA4Q9UI42 421 aa12.28□□□□□ -0.44
CCM2-208ENST00000476594 MYH7P12883 1935 aa12.27□□□□□ -0.44
CCM2-208ENST00000476594 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.45
CCM2-208ENST00000476594 SLURP2P0DP57 97 aa12.27□□□□□ -0.45
CCM2-208ENST00000476594 GNAT2P19087 354 aa12.27□□□□□ -0.45
CCM2-208ENST00000476594 MLLT1Q03111 559 aaPredicted RBP12.27□□□□□ -0.45
CCM2-208ENST00000476594 SLC9C1Q4G0N8 1177 aa12.27□□□□□ -0.45
CCM2-208ENST00000476594 GTF3C2Q8WUA4 911 aaPredicted RBP12.27□□□□□ -0.45
CCM2-208ENST00000476594 SDR42E1Q8WUS8 393 aa12.27□□□□□ -0.45
CCM2-208ENST00000476594 APPBP2Q92624 585 aa12.27□□□□□ -0.45
CCM2-208ENST00000476594 ARPP21Q9UBL0 812 aaPredicted RBP12.27□□□□□ -0.45
CCM2-208ENST00000476594 SLC4A4Q9Y6R1 1079 aa12.27□□□□□ -0.45
CCM2-208ENST00000476594 RNF113AO15541 343 aaKnown RBP12.26□□□□□ -0.45
CCM2-208ENST00000476594 GH2P01242 217 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 CYP2C8P10632 490 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 PSMC4P43686 418 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 MTMR2Q13614 643 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 RAB3GAP1Q15042 981 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 CCDC84Q86UT8 332 aaPredicted RBP12.26□□□□□ -0.45
CCM2-208ENST00000476594 FSD1Q9BTV5 496 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 TMEM106CQ9BVX2 250 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 SH2D4AQ9H788 454 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 ZNF287Q9HBT7 754 aa12.26□□□□□ -0.45
CCM2-208ENST00000476594 SIPA1L1O43166 1804 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 PHIPQ8WWQ0 1821 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 PTPRFP10586 1907 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 MPHOSPH10O00566 681 aaKnown RBP12.25□□□□□ -0.45
CCM2-208ENST00000476594 BCRP11274 1271 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 RGS19P49795 217 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 PLCD1P51178 756 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 FAM110CQ1W6H9 321 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 GIMAP6Q6P9H5 292 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 RAET1EQ8TD07 263 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 CCDC17Q96LX7 622 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 NACAP1Q9BZK3 213 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.25□□□□□ -0.45
CCM2-208ENST00000476594 ADGRA2Q96PE1 1338 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 LOC285556D6RIA3 1793 aa12.25□□□□□ -0.45
CCM2-208ENST00000476594 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
CCM2-208ENST00000476594 HOXA7P31268 230 aaPredicted RBP12.24□□□□□ -0.45
CCM2-208ENST00000476594 SOX10P56693 466 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 GABPAQ06546 454 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 RRP1BQ14684 758 aaKnown RBP12.24□□□□□ -0.45
CCM2-208ENST00000476594 DDX60LQ5H9U9 1706 aaKnown RBP12.24□□□□□ -0.45
CCM2-208ENST00000476594 TREML2Q5T2D2 321 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 TSHZ3Q63HK5 1081 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 TMEM179Q6ZVK1 233 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 MYPNQ86TC9 1320 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 TICAM2Q86XR7 235 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 CCAR1Q8IX12 1150 aaKnown RBP12.24□□□□□ -0.45
CCM2-208ENST00000476594 COA7Q96BR5 231 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 PUS7LQ9H0K6 701 aaKnown RBP12.24□□□□□ -0.45
CCM2-208ENST00000476594 SRRDQ9UH36 339 aa12.24□□□□□ -0.45
CCM2-208ENST00000476594 APPP05067 770 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 SHMT1P34896 483 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 TDO2P48775 406 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 ANKRD13CQ8N6S4 541 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 PI4K2BQ8TCG2 481 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 ARMC5Q96C12 935 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 EVI5LQ96CN4 794 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 KIAA1683Q9H0B3 1180 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 ASCC2Q9H1I8 757 aaPredicted RBP12.23□□□□□ -0.45
CCM2-208ENST00000476594 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 CWC22Q9HCG8 908 aaKnown RBP12.23□□□□□ -0.45
CCM2-208ENST00000476594 PTCH2Q9Y6C5 1203 aa12.23□□□□□ -0.45
CCM2-208ENST00000476594 USP17L15C9J2P7 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L13C9JLJ4 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L12C9JPN9 530 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms