RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
MRPL55-228ENST00000476267 DPF3Q92784 378 aa16.06■□□□□ 0.16
MRPL55-228ENST00000476267 HTATIP2Q9BUP3 242 aa16.06■□□□□ 0.16
MRPL55-228ENST00000476267 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
MRPL55-228ENST00000476267 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
MRPL55-228ENST00000476267 POTEEQ6S8J3 1075 aa16.05■□□□□ 0.16
MRPL55-228ENST00000476267 ITPRIPQ8IWB1 547 aa16.05■□□□□ 0.16
MRPL55-228ENST00000476267 DEFB118Q96PH6 123 aa16.05■□□□□ 0.16
MRPL55-228ENST00000476267 CCDC8Q9H0W5 538 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-228ENST00000476267 RBM27Q9P2N5 1060 aaKnown RBP16.05■□□□□ 0.16
MRPL55-228ENST00000476267 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
MRPL55-228ENST00000476267 NAV1Q8NEY1 1877 aa16.04■□□□□ 0.16
MRPL55-228ENST00000476267 C19orf81C9J6K1 198 aa16.04■□□□□ 0.16
MRPL55-228ENST00000476267 GDF11O95390 407 aa16.04■□□□□ 0.16
MRPL55-228ENST00000476267 HMGCRP04035 888 aa16.04■□□□□ 0.16
MRPL55-228ENST00000476267 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
MRPL55-228ENST00000476267 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
MRPL55-228ENST00000476267 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.04■□□□□ 0.16
MRPL55-228ENST00000476267 ANTXR1Q9H6X2 564 aa16.04■□□□□ 0.16
MRPL55-228ENST00000476267 TXNRD2Q9NNW7 524 aa16.04■□□□□ 0.16
MRPL55-228ENST00000476267 NDUFB9Q9Y6M9 179 aa16.04■□□□□ 0.16
MRPL55-228ENST00000476267 USP17L10C9JJH3 530 aa16.03■□□□□ 0.16
MRPL55-228ENST00000476267 PEX10O60683 326 aa16.03■□□□□ 0.16
MRPL55-228ENST00000476267 CYP7A1P22680 504 aa16.03■□□□□ 0.16
MRPL55-228ENST00000476267 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-228ENST00000476267 HERVK_113P62684 666 aa16.03■□□□□ 0.16
MRPL55-228ENST00000476267 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
MRPL55-228ENST00000476267 TRIM32Q13049 653 aa16.03■□□□□ 0.16
MRPL55-228ENST00000476267 P2RX7Q99572 595 aaKnown RBP16.03■□□□□ 0.16
MRPL55-228ENST00000476267 SAP30BPQ9UHR5 308 aaKnown RBP16.03■□□□□ 0.16
MRPL55-228ENST00000476267 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.16
MRPL55-228ENST00000476267 CRACR2BQ8N4Y2 399 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-228ENST00000476267 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.16
MRPL55-228ENST00000476267 TRIB2Q92519 343 aa16.02■□□□□ 0.16
MRPL55-228ENST00000476267 C12orf42Q96LP6 360 aa16.02■□□□□ 0.16
MRPL55-228ENST00000476267 EHD4Q9H223 541 aa16.02■□□□□ 0.16
MRPL55-228ENST00000476267 EMILIN3Q9NT22 766 aa16.02■□□□□ 0.16
MRPL55-228ENST00000476267 RBPJLQ9UBG7 517 aa16.02■□□□□ 0.16
MRPL55-228ENST00000476267 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.16
MRPL55-228ENST00000476267 FRMPD3Q5JV73 1810 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 RPTORQ8N122 1335 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 IDH1O75874 414 aaKnown RBP16.01■□□□□ 0.15
MRPL55-228ENST00000476267 TFRCP02786 760 aaKnown RBP16.01■□□□□ 0.15
MRPL55-228ENST00000476267 HLA-DOAP06340 250 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 IRX3P78415 501 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-228ENST00000476267 TMED8Q6PL24 325 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-228ENST00000476267 CERS3Q8IU89 383 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 MAGEB6Q8N7X4 407 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 ANKLE1Q8NAG6 615 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 DIS3LQ8TF46 1054 aaKnown RBP16.01■□□□□ 0.15
MRPL55-228ENST00000476267 USP6NLQ92738 828 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 RIOK1Q9BRS2 568 aaKnown RBP16.01■□□□□ 0.15
MRPL55-228ENST00000476267 TMOD4Q9NZQ9 345 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 EXOC6BQ9Y2D4 811 aa16.01■□□□□ 0.15
MRPL55-228ENST00000476267 Q3C1V9 767 aa16■□□□□ 0.15
MRPL55-228ENST00000476267 MIER1Q8N108 512 aa16■□□□□ 0.15
MRPL55-228ENST00000476267 GPRC5AQ8NFJ5 357 aa16■□□□□ 0.15
MRPL55-228ENST00000476267 PAWRQ96IZ0 340 aaKnown RBP16■□□□□ 0.15
MRPL55-228ENST00000476267 NR2E3Q9Y5X4 410 aa16■□□□□ 0.15
MRPL55-228ENST00000476267 LAMA3Q16787 3333 aa16■□□□□ 0.15
MRPL55-228ENST00000476267 A0A0G2JMZ2 1700 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 CNMDO75829 334 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 GH2P01242 217 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 XRCC5P13010 732 aaKnown RBP15.99■□□□□ 0.15
MRPL55-228ENST00000476267 ERVK-9P63128 1117 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 ERVK-24P63145 666 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 PANK1Q8TE04 598 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 TRIM34Q9BYJ4 488 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 PORCNQ9H237 461 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 SERPINB13Q9UIV8 391 aa15.99■□□□□ 0.15
MRPL55-228ENST00000476267 SHMT1P34896 483 aa15.98■□□□□ 0.15
MRPL55-228ENST00000476267 MAP3K12Q12852 859 aa15.98■□□□□ 0.15
MRPL55-228ENST00000476267 MORN1Q5T089 497 aa15.98■□□□□ 0.15
MRPL55-228ENST00000476267 USP17L2Q6R6M4 530 aa15.98■□□□□ 0.15
MRPL55-228ENST00000476267 AACSQ86V21 672 aa15.98■□□□□ 0.15
MRPL55-228ENST00000476267 ERC1Q8IUD2 1116 aa15.98■□□□□ 0.15
MRPL55-228ENST00000476267 GTF3C2Q8WUA4 911 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-228ENST00000476267 SOCS4Q8WXH5 440 aa15.98■□□□□ 0.15
MRPL55-228ENST00000476267 HMX1Q9NP08 348 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-228ENST00000476267 OGDHLQ9ULD0 1010 aa15.98■□□□□ 0.15
MRPL55-228ENST00000476267 EVI5O60447 810 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 CYP2B6P20813 491 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 MAPK4P31152 587 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 GUCY1A2P33402 732 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 USP5P45974 858 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 PLCD1P51178 756 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 GABPAQ06546 454 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 NECAB2Q7Z6G3 386 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 RHPN1Q8TCX5 695 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 NUDT12Q9BQG2 462 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 KIAA1683Q9H0B3 1180 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 CEP290O15078 2479 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 RLFQ13129 1914 aa15.97■□□□□ 0.15
MRPL55-228ENST00000476267 ZNF236Q9UL36 1845 aa15.96■□□□□ 0.15
MRPL55-228ENST00000476267 A0A1W2PPC1 479 aa15.96■□□□□ 0.15
MRPL55-228ENST00000476267 TCRBV5S4A2TA0A5A2 114 aa15.96■□□□□ 0.15
MRPL55-228ENST00000476267 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
MRPL55-228ENST00000476267 EVX2Q03828 476 aa15.96■□□□□ 0.15
MRPL55-228ENST00000476267 LBX2Q6XYB7 198 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms