RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-205ENST00000475993 MICAL1Q8TDZ2 1067 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 E7EWF7 191 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 PBX1P40424 430 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 CLNS1AP54105 237 aaKnown RBP11.92□□□□□ -0.5
ABCF1-205ENST00000475993 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
ABCF1-205ENST00000475993 TEFQ10587 303 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 PTPAQ15257 358 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 APTXQ7Z2E3 356 aaKnown RBP11.92□□□□□ -0.5
ABCF1-205ENST00000475993 TRAPPC11Q7Z392 1133 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 MLKLQ8NB16 471 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 ANKRD24Q8TF21 1146 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 SUCLG2Q96I99 432 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 MED15Q96RN5 788 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 HOOK1Q9UJC3 728 aaKnown RBP11.92□□□□□ -0.5
ABCF1-205ENST00000475993 MAN1B1Q9UKM7 699 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 MFAP3LO75121 409 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 RTN2O75298 545 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 ECEL1O95672 775 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 RPS6KA3P51812 740 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 SF3B2Q13435 895 aaKnown RBP11.92□□□□□ -0.5
ABCF1-205ENST00000475993 RBBP5Q15291 538 aaKnown RBP11.92□□□□□ -0.5
ABCF1-205ENST00000475993 NT5DC1Q5TFE4 455 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 B4GALNT4Q76KP1 1039 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 PPFIBP1Q86W92 1011 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 ZBTB10Q96DT7 871 aa11.92□□□□□ -0.5
ABCF1-205ENST00000475993 SAMSN1Q9NSI8 373 aaKnown RBP11.92□□□□□ -0.5
ABCF1-205ENST00000475993 UTYO14607 1347 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 MAFGO15525 162 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 TEX33O43247 280 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 GNGT1P63211 74 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 WLSQ5T9L3 541 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 ANKARQ7Z5J8 1434 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 IQCA1Q86XH1 822 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
ABCF1-205ENST00000475993 ACRBPQ8NEB7 543 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 DSCC1Q9BVC3 393 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 SELENOOQ9BVL4 669 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 ANKRD18BA2A2Z9 1011 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 MEFVO15553 781 aaPredicted RBP11.91□□□□□ -0.5
ABCF1-205ENST00000475993 ANXA1P04083 346 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 TBC1D25Q3MII6 688 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 NFXL1Q6ZNB6 911 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 TRMT44Q8IYL2 757 aaKnown RBP11.91□□□□□ -0.5
ABCF1-205ENST00000475993 CCDC51Q96ER9 411 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
ABCF1-205ENST00000475993 USP6P35125 1406 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 GOLGA6BA6NDN3 693 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 FOXN1O15353 648 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 SARSP49591 514 aaKnown RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 NAP1L1P55209 391 aaKnown RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 YTHDF3Q7Z739 585 aaKnown RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 KCNH3Q9ULD8 1083 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 SAMM50Q9Y512 469 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 A6NNZ2 444 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 TMCO5BA8MYB1 307 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 SKOR1P84550 965 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 MORC3Q14149 939 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 CWF19L2Q2TBE0 894 aaKnown RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 TUBB8Q3ZCM7 444 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 CCNI2Q6ZMN8 369 aaPredicted RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 CHST3Q7LGC8 479 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 RPUSD2Q8IZ73 545 aaKnown RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 MAP3K14Q99558 947 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 RABEP2Q9H5N1 569 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 G3BP2Q9UN86 482 aaKnown RBP11.9□□□□□ -0.5
ABCF1-205ENST00000475993 ACEP12821 1306 aa11.9□□□□□ -0.5
ABCF1-205ENST00000475993 A0A1B0GUA9 196 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 GRM8O00222 908 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 MRPL12P52815 198 aaKnown RBP11.89□□□□□ -0.51
ABCF1-205ENST00000475993 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 CNGA4Q8IV77 575 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 CPLX3Q8WVH0 158 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 GDAP1L1Q96MZ0 367 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.89□□□□□ -0.51
ABCF1-205ENST00000475993 WWC3Q9ULE0 1092 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 NDUFB9Q9Y6M9 179 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 MAP3K15Q6ZN16 1313 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 A0A0G2JLW4 131 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 GOLGA8KD6RF30 607 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 KIAA0754O94854 1291 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 NAA25Q14CX7 972 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 SLC9C2Q5TAH2 1124 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 TMTC1Q8IUR5 882 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 RPGRIP1Q96KN7 1286 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 MMS19Q96T76 1030 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 PSMD14O00487 310 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 GYPCP04921 128 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 CASP14P31944 242 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms