RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-211ENST00000475728 ZNF280CQ8ND82 737 aa17.3■□□□□ 0.36
ABCF3-211ENST00000475728 PTPN18Q99952 460 aa17.3■□□□□ 0.36
ABCF3-211ENST00000475728 ZFYVE28Q9HCC9 887 aa17.3■□□□□ 0.36
ABCF3-211ENST00000475728 CABP5Q9NP86 173 aa17.3■□□□□ 0.36
ABCF3-211ENST00000475728 LAMB1P07942 1786 aa17.3■□□□□ 0.36
ABCF3-211ENST00000475728 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-211ENST00000475728 GSG1L2A8MUP6 293 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
ABCF3-211ENST00000475728 M0R2C6 588 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 HIP1O00291 1037 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 TBC1D8O95759 1140 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 APPP05067 770 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 GABPAQ06546 454 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 TAF1CQ15572 869 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-211ENST00000475728 SBK1Q52WX2 424 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-211ENST00000475728 ANKRD23Q86SG2 305 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 WDR18Q9BV38 432 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 ZBTB21Q9ULJ3 1066 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 MYH1P12882 1939 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 DOCK1Q14185 1865 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 NAV1Q8NEY1 1877 aa17.29■□□□□ 0.36
ABCF3-211ENST00000475728 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 BTBD19C9JJ37 291 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 GPR25O00155 361 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 SHMT1P34896 483 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 TDO2P48775 406 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 MFAP1P55081 439 aaKnown RBP17.28■□□□□ 0.36
ABCF3-211ENST00000475728 SPP2Q13103 211 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 DGKZQ13574 1117 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 RRP1BQ14684 758 aaKnown RBP17.28■□□□□ 0.36
ABCF3-211ENST00000475728 ABCB5Q2M3G0 1257 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 CTR9Q6PD62 1173 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 ZNF287Q9HBT7 754 aa17.28■□□□□ 0.36
ABCF3-211ENST00000475728 DDX60LQ5H9U9 1706 aaKnown RBP17.27■□□□□ 0.36
ABCF3-211ENST00000475728 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
ABCF3-211ENST00000475728 GDF11O95390 407 aa17.27■□□□□ 0.36
ABCF3-211ENST00000475728 GH2P01242 217 aa17.27■□□□□ 0.36
ABCF3-211ENST00000475728 CYP2D6P10635 497 aa17.27■□□□□ 0.36
ABCF3-211ENST00000475728 PDE4AP27815 886 aa17.27■□□□□ 0.36
ABCF3-211ENST00000475728 MCMDC2Q4G0Z9 681 aa17.27■□□□□ 0.36
ABCF3-211ENST00000475728 FAM43AQ8N2R8 423 aa17.27■□□□□ 0.36
ABCF3-211ENST00000475728 CCDC17Q96LX7 622 aa17.27■□□□□ 0.36
ABCF3-211ENST00000475728 C19orf81C9J6K1 198 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 FKTNO75072 461 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
ABCF3-211ENST00000475728 CRHR2Q13324 411 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 GADL1Q6ZQY3 521 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 C16orf86Q6ZW13 317 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 IFNL3Q8IZI9 196 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 PROCA1Q8NCQ7 364 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-211ENST00000475728 SEC62Q99442 399 aaKnown RBP17.26■□□□□ 0.35
ABCF3-211ENST00000475728 NAPBQ9H115 298 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 DIAPH3Q9NSV4 1193 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 SLC45A1Q9Y2W3 748 aa17.26■□□□□ 0.35
ABCF3-211ENST00000475728 PDHXO00330 501 aa17.25■□□□□ 0.35
ABCF3-211ENST00000475728 SLC3A2P08195 630 aaKnown RBP17.25■□□□□ 0.35
ABCF3-211ENST00000475728 SDSP20132 328 aa17.25■□□□□ 0.35
ABCF3-211ENST00000475728 SOX10P56693 466 aa17.25■□□□□ 0.35
ABCF3-211ENST00000475728 BACE1P56817 501 aa17.25■□□□□ 0.35
ABCF3-211ENST00000475728 MOGSQ13724 837 aa17.25■□□□□ 0.35
ABCF3-211ENST00000475728 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
ABCF3-211ENST00000475728 CCDC84Q86UT8 332 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-211ENST00000475728 CCDC136Q96JN2 1154 aa17.25■□□□□ 0.35
ABCF3-211ENST00000475728 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
ABCF3-211ENST00000475728 TMOD4Q9NZQ9 345 aa17.25■□□□□ 0.35
ABCF3-211ENST00000475728 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-211ENST00000475728 MINDY4BA8MYZ0 360 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 USP17L10C9JJH3 530 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 MPHOSPH10O00566 681 aaKnown RBP17.24■□□□□ 0.35
ABCF3-211ENST00000475728 CDK8P49336 464 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 NMIQ13287 307 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-211ENST00000475728 RAB3GAP1Q15042 981 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 SH3D19Q5HYK7 790 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 TMEM179Q6ZVK1 233 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 ZNF296Q8WUU4 475 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-211ENST00000475728 DYNLL2Q96FJ2 89 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 EPB41L4AQ9HCS5 686 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-211ENST00000475728 PNMA3Q9UL41 463 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 AGTPBP1Q9UPW5 1226 aa17.24■□□□□ 0.35
ABCF3-211ENST00000475728 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 A0A0D9SFI3 127 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 TLR2O60603 784 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 USP14P54578 494 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 HMGCS2P54868 508 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 JAG1P78504 1218 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 ARHGEF6Q15052 776 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 GPAT2Q6NUI2 795 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 SLC44A5Q8NCS7 719 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 ERO1AQ96HE7 468 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 FAM227BQ96M60 508 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 FEZ1Q99689 392 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 MKNK2Q9HBH9 465 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 ROBO3Q96MS0 1386 aa17.23■□□□□ 0.35
ABCF3-211ENST00000475728 CCDC171Q6TFL3 1326 aa17.22■□□□□ 0.35
ABCF3-211ENST00000475728 SP3Q02447 781 aa17.22■□□□□ 0.35
ABCF3-211ENST00000475728 MTMR2Q13614 643 aa17.22■□□□□ 0.35
ABCF3-211ENST00000475728 ALX1Q15699 326 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms