RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 GLRX3O76003 335 aaKnown RBP8.4□□□□□ -1.06
LSAMP-204ENST00000475403 MRPS5P82675 430 aaKnown RBP8.4□□□□□ -1.06
LSAMP-204ENST00000475403 MTMR2Q13614 643 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 GPR142Q7Z601 462 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 PLEKHH3Q7Z736 793 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 SLF2Q8IX21 1173 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 ZGPATQ8N5A5 531 aaKnown RBP8.4□□□□□ -1.06
LSAMP-204ENST00000475403 GTF3C2Q8WUA4 911 aaPredicted RBP8.4□□□□□ -1.06
LSAMP-204ENST00000475403 LPAR1Q92633 364 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 SRCIN1Q9C0H9 1055 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 ZMYND15Q9H091 742 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 DDX20Q9UHI6 824 aaKnown RBP8.4□□□□□ -1.06
LSAMP-204ENST00000475403 MYH2Q9UKX2 1941 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 FAM196BA6NMK8 535 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 ALDH1L1O75891 902 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 SLURP2P0DP57 97 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 DNAJB2P25686 324 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 HERVK_113P62684 666 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 ERVK-24P63145 666 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 CCNA1P78396 465 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 ATP2B2Q01814 1243 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 GRIN2CQ14957 1233 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 TRIM60Q495X7 471 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 GJC2Q5T442 439 aaPredicted RBP8.39□□□□□ -1.07
LSAMP-204ENST00000475403 SH3BP5LQ7L8J4 393 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 VGLL2Q8N8G2 317 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 ARRDC4Q8NCT1 418 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 LPIN2Q92539 896 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 ASB2Q96Q27 587 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 TSPYL2Q9H2G4 693 aaPredicted RBP8.39□□□□□ -1.07
LSAMP-204ENST00000475403 ZNF576Q9H609 170 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 BICC1Q9H694 974 aaKnown RBP8.39□□□□□ -1.07
LSAMP-204ENST00000475403 IVNS1ABPQ9Y6Y0 642 aa8.39□□□□□ -1.07
LSAMP-204ENST00000475403 RFX7Q2KHR2 1363 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 UTYO14607 1347 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 PEX10O60683 326 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 BTDP43251 543 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 MAP2K5Q13163 448 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 SLC39A5Q6ZMH5 540 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 TIFAQ96CG3 184 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 EDC3Q96F86 508 aaKnown RBP8.38□□□□□ -1.07
LSAMP-204ENST00000475403 TRIM34Q9BYJ4 488 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 TXNRD2Q9NNW7 524 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 DDX4Q9NQI0 724 aaKnown RBP8.38□□□□□ -1.07
LSAMP-204ENST00000475403 PDLIM7Q9NR12 457 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 ABCF2Q9UG63 623 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 DENND2AQ9ULE3 1009 aa8.38□□□□□ -1.07
LSAMP-204ENST00000475403 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.37□□□□□ -1.07
LSAMP-204ENST00000475403 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.37□□□□□ -1.07
LSAMP-204ENST00000475403 TBC1D12O60347 775 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 IGFBP4P22692 258 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 CCDC85BQ15834 202 aaPredicted RBP8.37□□□□□ -1.07
LSAMP-204ENST00000475403 SH3D19Q5HYK7 790 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 MORN1Q5T089 497 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 CCDC129Q6ZRS4 1044 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 KLHDC4Q8TBB5 520 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 P2RX7Q99572 595 aaKnown RBP8.37□□□□□ -1.07
LSAMP-204ENST00000475403 PORCNQ9H237 461 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 NDUFB9Q9Y6M9 179 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 RLFQ13129 1914 aa8.37□□□□□ -1.07
LSAMP-204ENST00000475403 MROH7-TTC4A0A0A0MT08 1334 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 GAKO14976 1311 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 SALL1Q9NSC2 1324 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 TRIM43BA6NCK2 446 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 SEMA3EO15041 775 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 CLTBP09497 229 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 NBPF7P0C2Y1 421 aaPredicted RBP8.36□□□□□ -1.07
LSAMP-204ENST00000475403 RAG1P15918 1043 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 FGFR2P21802 821 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 HOXA7P31268 230 aaPredicted RBP8.36□□□□□ -1.07
LSAMP-204ENST00000475403 CAP2P40123 477 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 BACE1P56817 501 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 FPGSQ05932 587 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 ATP2B3Q16720 1220 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 AKNAD1Q5T1N1 836 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 SPTY2D1Q68D10 685 aaPredicted RBP8.36□□□□□ -1.07
LSAMP-204ENST00000475403 POTEEQ6S8J3 1075 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 PPP4R3CPQ6ZMV5 832 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 USP6NLQ92738 828 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 TRIM43Q96BQ3 446 aaPredicted RBP8.36□□□□□ -1.07
LSAMP-204ENST00000475403 TACC3Q9Y6A5 838 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 NCOR1O75376 2440 aa8.36□□□□□ -1.07
LSAMP-204ENST00000475403 SYNGAP1Q96PV0 1343 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 SLC15A5A6NIM6 579 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 C19orf81C9J6K1 198 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 USP17L10C9JJH3 530 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 PQBP1O60828 265 aaKnown RBP8.35□□□□□ -1.07
LSAMP-204ENST00000475403 ASNSP08243 561 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 CYP2C19P33261 490 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 Q3C1V9 767 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 RABL6Q3YEC7 729 aaPredicted RBP8.35□□□□□ -1.07
LSAMP-204ENST00000475403 L1TD1Q5T7N2 865 aaKnown RBP8.35□□□□□ -1.07
LSAMP-204ENST00000475403 ANO1Q5XXA6 986 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 CCDC174Q6PII3 467 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 SH3RF1Q7Z6J0 888 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms