RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 USP28Q96RU2 1077 aa11.41□□□□□ -0.58
SPTAN1-206ENST00000475367 GOLGA6L4A6NEF3 574 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 TROAPQ12815 778 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 PPP2R5BQ15173 497 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 AOC3Q16853 763 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 CCDC183Q5T5S1 534 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 WASF1Q92558 559 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 USP40Q9NVE5 1235 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 RCOR1Q9UKL0 485 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 CDK5RAP2Q96SN8 1893 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 DDAH1O94760 285 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 CALM1P0DP23 149 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 CALM2P0DP24 149 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 CALM3P0DP25 149 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 DPEP1P16444 411 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 NT5C2P49902 561 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 TRIM29Q14134 588 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 STRIP1Q5VSL9 837 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 RCSD1Q6JBY9 416 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 HHIPL2Q6UWX4 724 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 BRAPQ7Z569 592 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 ZNF444Q8N0Y2 327 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 TTLL6Q8N841 843 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 TEKT1Q969V4 418 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 PGBD1Q96JS3 809 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 IL17RBQ9NRM6 502 aa11.4□□□□□ -0.58
SPTAN1-206ENST00000475367 DLEC1Q9Y238 1755 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 SNED1Q8TER0 1413 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 USP17L3A6NCW0 530 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 USP17L4A6NCW7 530 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 RASA1P20936 1047 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 CDK8P49336 464 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 KIAA2012Q0VF49 1180 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 PICALMQ13492 652 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 DACT2Q5SW24 774 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 LRSAM1Q6UWE0 723 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 C16orf86Q6ZW13 317 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 USP17L1Q7RTZ2 530 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 SUPT20HQ8NEM7 779 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 MYH15Q9Y2K3 1946 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 WDHD1O75717 1129 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 PLEKHA8P1O95397 391 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 TSPY3P0CV98 308 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 TSPY8P0CW00 308 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 LIG1P18858 919 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 CRKP46108 304 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 FKBP1AP62942 108 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 FUT2Q10981 343 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 CDC42EP5Q6NZY7 148 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 KIAA0825Q8IV33 1275 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 ANKS1AQ92625 1134 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 ZNF287Q9HBT7 754 aa11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 DDX4Q9NQI0 724 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 RBM28Q9NW13 759 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-206ENST00000475367 ECM29Q5VYK3 1845 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 PPIP5K2O43314 1243 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 DEXIO95424 95 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 KCNA3P22001 575 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 CCDC178Q5BJE1 867 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 MYSM1Q5VVJ2 828 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 DGKHQ86XP1 1220 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 KAT14Q9H8E8 782 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 TCP11L1Q9NUJ3 509 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 RTEL1Q9NZ71 1219 aa11.38□□□□□ -0.59
SPTAN1-206ENST00000475367 ZBTB7AO95365 584 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 AKAP17AQ02040 695 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 GNL2Q13823 731 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 TMTC3Q6ZXV5 915 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 CCDC125Q86Z20 511 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 CTCFLQ8NI51 663 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 RNF26Q9BY78 433 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 RBSNQ9H1K0 784 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 CLIC4Q9Y696 253 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 DDX60LQ5H9U9 1706 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 SCN9AQ15858 1988 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 MYH1P12882 1939 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 hCG_1642624A0A1W2PR95 340 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 PRPF3O43395 683 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 CCDC93Q567U6 631 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 BICD2Q8TD16 824 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 ZDHHC15Q96MV8 337 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 MRIQ9BWK5 157 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 KCNJ14Q9UNX9 436 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 PCDHAC2Q9Y5I4 1007 aa11.37□□□□□ -0.59
SPTAN1-206ENST00000475367 ADAMTSL1Q8N6G6 1762 aa11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 LETM1O95202 739 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.597e-9■□□□□ 10.4
SPTAN1-206ENST00000475367 PKN1Q16512 942 aa11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 RTKN2Q8IZC4 609 aa11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 SRBD1Q8N5C6 995 aaKnown RBP11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 NEDD1Q8NHV4 660 aa11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 FOCADQ5VW36 1801 aa11.36□□□□□ -0.59
SPTAN1-206ENST00000475367 YDJCA8MPS7 323 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms