RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 SMCR8Q8TEV9 937 aaPredicted RBP14.36□□□□□ -0.11
CLIP2-204ENST00000474962 CCDC136Q96JN2 1154 aa14.36□□□□□ -0.11
CLIP2-204ENST00000474962 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
CLIP2-204ENST00000474962 SMARCA5O60264 1052 aaPredicted RBP14.35□□□□□ -0.11
CLIP2-204ENST00000474962 IGSF3O75054 1194 aa14.35□□□□□ -0.11
CLIP2-204ENST00000474962 GDF11O95390 407 aa14.35□□□□□ -0.11
CLIP2-204ENST00000474962 GRK4P32298 578 aa14.35□□□□□ -0.11
CLIP2-204ENST00000474962 FCGRTP55899 365 aa14.35□□□□□ -0.11
CLIP2-204ENST00000474962 MAP3K12Q12852 859 aa14.35□□□□□ -0.11
CLIP2-204ENST00000474962 CRACR2BQ8N4Y2 399 aaPredicted RBP14.35□□□□□ -0.11
CLIP2-204ENST00000474962 COL2A1P02458 1487 aaPredicted RBP14.35□□□□□ -0.11
CLIP2-204ENST00000474962 MYPNQ86TC9 1320 aa14.35□□□□□ -0.11
CLIP2-204ENST00000474962 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
CLIP2-204ENST00000474962 USP5P45974 858 aa14.34□□□□□ -0.11
CLIP2-204ENST00000474962 PROCA1Q8NCQ7 364 aaPredicted RBP14.34□□□□□ -0.11
CLIP2-204ENST00000474962 GPATCH3Q96I76 525 aa14.34□□□□□ -0.11
CLIP2-204ENST00000474962 WDR18Q9BV38 432 aa14.34□□□□□ -0.11
CLIP2-204ENST00000474962 TRIM34Q9BYJ4 488 aa14.34□□□□□ -0.11
CLIP2-204ENST00000474962 BIN2Q9UBW5 565 aaPredicted RBP14.34□□□□□ -0.11
CLIP2-204ENST00000474962 ASNSP08243 561 aa14.33□□□□□ -0.12
CLIP2-204ENST00000474962 FLT3LGP49771 235 aa14.33□□□□□ -0.12
CLIP2-204ENST00000474962 BACE1P56817 501 aa14.33□□□□□ -0.12
CLIP2-204ENST00000474962 MTMR2Q13614 643 aa14.33□□□□□ -0.12
CLIP2-204ENST00000474962 SH3D19Q5HYK7 790 aa14.33□□□□□ -0.12
CLIP2-204ENST00000474962 SLC9C2Q5TAH2 1124 aa14.33□□□□□ -0.12
CLIP2-204ENST00000474962 SMC5Q8IY18 1101 aa14.33□□□□□ -0.12
CLIP2-204ENST00000474962 EDC3Q96F86 508 aaKnown RBP14.33□□□□□ -0.12
CLIP2-204ENST00000474962 TBC1D2Q9BYX2 928 aa14.33□□□□□ -0.12
CLIP2-204ENST00000474962 ASCC2Q9H1I8 757 aaPredicted RBP14.33□□□□□ -0.12
CLIP2-204ENST00000474962 DOCK1Q14185 1865 aa14.32□□□□□ -0.12
CLIP2-204ENST00000474962 GOLIM4O00461 696 aa14.32□□□□□ -0.12
CLIP2-204ENST00000474962 PEX10O60683 326 aa14.32□□□□□ -0.12
CLIP2-204ENST00000474962 HLA-DOAP06340 250 aa14.32□□□□□ -0.12
CLIP2-204ENST00000474962 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
CLIP2-204ENST00000474962 DNAJC2Q99543 621 aaKnown RBP14.32□□□□□ -0.12
CLIP2-204ENST00000474962 P2RX7Q99572 595 aaKnown RBP14.32□□□□□ -0.12
CLIP2-204ENST00000474962 RIOK1Q9BRS2 568 aaKnown RBP14.32□□□□□ -0.12
CLIP2-204ENST00000474962 AS3MTQ9HBK9 375 aa14.32□□□□□ -0.12
CLIP2-204ENST00000474962 PPP4R2Q9NY27 417 aa14.32□□□□□ -0.12
CLIP2-204ENST00000474962 PNMA3Q9UL41 463 aa14.32□□□□□ -0.12
CLIP2-204ENST00000474962 MAGEB6P1A0A0J9YX57 407 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 TNPO2O14787 897 aaKnown RBP14.31□□□□□ -0.12
CLIP2-204ENST00000474962 ADCY3O60266 1144 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 GH2P01242 217 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 CCL5P13501 91 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 ELNP15502 786 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 PDE6AP16499 860 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 PLCD1P51178 756 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 TTF1Q15361 905 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-204ENST00000474962 TATDN1Q6P1N9 297 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 BOLA2Q9H3K6 86 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
CLIP2-204ENST00000474962 TCRBV5S4A2TA0A5A2 114 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 USP17L10C9JJH3 530 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 GCLCP48506 637 aaPredicted RBP14.3□□□□□ -0.12
CLIP2-204ENST00000474962 EVX2Q03828 476 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 PABPC4Q13310 644 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLIP2-204ENST00000474962 CENPQQ7L2Z9 268 aaPredicted RBP14.3□□□□□ -0.12
CLIP2-204ENST00000474962 CHD1LQ86WJ1 897 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 CERS3Q8IU89 383 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLIP2-204ENST00000474962 LNPKQ9C0E8 428 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 EMILIN3Q9NT22 766 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 TMOD4Q9NZQ9 345 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 SERPINB13Q9UIV8 391 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 TAOK2Q9UL54 1235 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 PTPRFP10586 1907 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 ZNF532Q9HCE3 1301 aa14.3□□□□□ -0.12
CLIP2-204ENST00000474962 SIPA1L1O43166 1804 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 CHGBP05060 677 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 HOXA7P31268 230 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-204ENST00000474962 NUCB1Q02818 461 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 FAM110CQ1W6H9 321 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 CERKLQ49MI3 558 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-204ENST00000474962 TMED8Q6PL24 325 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-204ENST00000474962 TTC6Q86TZ1 520 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 SLAIN1Q8ND83 568 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 COA7Q96BR5 231 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 SHISA4Q96DD7 197 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 UNC93B1Q9H1C4 597 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 GINM1Q9NU53 330 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
CLIP2-204ENST00000474962 ERC2O15083 957 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 POLR3DP05423 398 aaPredicted RBP14.28□□□□□ -0.12
CLIP2-204ENST00000474962 GJB1P08034 283 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 ATP5JP18859 108 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 UBXN2AP68543 259 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
CLIP2-204ENST00000474962 IRF5Q13568 498 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 RAB3GAP1Q15042 981 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 Q3C1V9 767 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 POTEEQ6S8J3 1075 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 CDK5RAP2Q96SN8 1893 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 EHD4Q9H223 541 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 TXNRD2Q9NNW7 524 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 ECHDC1Q9NTX5 307 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 PAG1Q9NWQ8 432 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms