RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 LAMA2P24043 3122 aaKnown RBP17.17■□□□□ 0.34
CCDC78-209ENST00000474647 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
CCDC78-209ENST00000474647 PLCG2P16885 1265 aa17.17■□□□□ 0.34
CCDC78-209ENST00000474647 SHROOM1Q2M3G4 852 aaPredicted RBP17.17■□□□□ 0.34
CCDC78-209ENST00000474647 CCDC158Q5M9N0 1113 aa17.17■□□□□ 0.34
CCDC78-209ENST00000474647 ATF7IPQ6VMQ6 1270 aa17.17■□□□□ 0.34
CCDC78-209ENST00000474647 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
CCDC78-209ENST00000474647 DNAJC18Q9H819 358 aa17.17■□□□□ 0.34
CCDC78-209ENST00000474647 MORF4L1Q9UBU8 362 aa17.17■□□□□ 0.34
CCDC78-209ENST00000474647 SAP30BPQ9UHR5 308 aaKnown RBP17.17■□□□□ 0.34
CCDC78-209ENST00000474647 GJD2Q9UKL4 321 aa17.17■□□□□ 0.34
CCDC78-209ENST00000474647 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
CCDC78-209ENST00000474647 SYN1P17600 705 aa17.16■□□□□ 0.34
CCDC78-209ENST00000474647 BACE1P56817 501 aa17.16■□□□□ 0.34
CCDC78-209ENST00000474647 HERVK_113P62684 666 aa17.16■□□□□ 0.34
CCDC78-209ENST00000474647 CCAR1Q8IX12 1150 aaKnown RBP17.16■□□□□ 0.34
CCDC78-209ENST00000474647 DBNDD2Q9BQY9 259 aa17.16■□□□□ 0.34
CCDC78-209ENST00000474647 WDR18Q9BV38 432 aa17.16■□□□□ 0.34
CCDC78-209ENST00000474647 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
CCDC78-209ENST00000474647 C11orf49Q9H6J7 331 aa17.16■□□□□ 0.34
CCDC78-209ENST00000474647 PALD1Q9ULE6 856 aa17.16■□□□□ 0.34
CCDC78-209ENST00000474647 BCAR3O75815 825 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 JAG1P78504 1218 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 PDE3AQ14432 1141 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 TNNI3KQ59H18 835 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 SOCS4Q8WXH5 440 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 P2RX7Q99572 595 aaKnown RBP17.15■□□□□ 0.34
CCDC78-209ENST00000474647 NUDT12Q9BQG2 462 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 PAGR1Q9BTK6 254 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 TXNRD2Q9NNW7 524 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 ZBTB21Q9ULJ3 1066 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 FPGT-TNNI3KV9GXZ4 949 aa17.15■□□□□ 0.34
CCDC78-209ENST00000474647 ZNFX1Q9P2E3 1918 aaKnown RBP17.15■□□□□ 0.34
CCDC78-209ENST00000474647 MYH7P12883 1935 aa17.14■□□□□ 0.33
CCDC78-209ENST00000474647 USP17L10C9JJH3 530 aa17.14■□□□□ 0.33
CCDC78-209ENST00000474647 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
CCDC78-209ENST00000474647 HLA-DOAP06340 250 aa17.14■□□□□ 0.33
CCDC78-209ENST00000474647 ZKSCAN1P17029 563 aaPredicted RBP17.14■□□□□ 0.33
CCDC78-209ENST00000474647 SLC17A8Q8NDX2 589 aa17.14■□□□□ 0.33
CCDC78-209ENST00000474647 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
CCDC78-209ENST00000474647 A0A0C4DFX4 3053 aa17.14■□□□□ 0.33
CCDC78-209ENST00000474647 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
CCDC78-209ENST00000474647 COL11A1P12107 1806 aaPredicted RBP17.13■□□□□ 0.33
CCDC78-209ENST00000474647 PARP14Q460N5 1801 aa17.13■□□□□ 0.33
CCDC78-209ENST00000474647 C19orf81C9J6K1 198 aa17.13■□□□□ 0.33
CCDC78-209ENST00000474647 HOXA7P31268 230 aaPredicted RBP17.13■□□□□ 0.33
CCDC78-209ENST00000474647 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
CCDC78-209ENST00000474647 ZYXQ15942 572 aaKnown RBP17.13■□□□□ 0.33
CCDC78-209ENST00000474647 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
CCDC78-209ENST00000474647 MAPK4P31152 587 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 ZAP70P43403 619 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 MNX1P50219 401 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-209ENST00000474647 PPP4CP60510 307 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 ERVK-9P63128 1117 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 ERVK-24P63145 666 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 FOXP4Q8IVH2 680 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-209ENST00000474647 FEZ1Q99689 392 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 GDF15Q99988 308 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 PORCNQ9H237 461 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 GPR108Q9NPR9 543 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 OGDHLQ9ULD0 1010 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 LTBP2Q14767 1821 aa17.12■□□□□ 0.33
CCDC78-209ENST00000474647 SURF6O75683 361 aaKnown RBP17.11■□□□□ 0.33
CCDC78-209ENST00000474647 CYP7A1P22680 504 aa17.11■□□□□ 0.33
CCDC78-209ENST00000474647 MAP3K21Q5TCX8 1036 aa17.11■□□□□ 0.33
CCDC78-209ENST00000474647 GPR142Q7Z601 462 aa17.11■□□□□ 0.33
CCDC78-209ENST00000474647 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
CCDC78-209ENST00000474647 RBPJLQ9UBG7 517 aa17.11■□□□□ 0.33
CCDC78-209ENST00000474647 PFASO15067 1338 aa17.11■□□□□ 0.33
CCDC78-209ENST00000474647 PLXNA1Q9UIW2 1896 aa17.11■□□□□ 0.33
CCDC78-209ENST00000474647 RLFQ13129 1914 aa17.11■□□□□ 0.33
CCDC78-209ENST00000474647 UNC80Q8N2C7 3258 aa17.11■□□□□ 0.33
CCDC78-209ENST00000474647 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 IDH1O75874 414 aaKnown RBP17.1■□□□□ 0.33
CCDC78-209ENST00000474647 GH2P01242 217 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 XRCC5P13010 732 aaKnown RBP17.1■□□□□ 0.33
CCDC78-209ENST00000474647 CCND3P30281 292 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-209ENST00000474647 BMP8BP34820 402 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 RGS2P41220 211 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 MAGEA10P43363 369 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-209ENST00000474647 USP5P45974 858 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 CACNB2Q08289 660 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-209ENST00000474647 POLA2Q14181 598 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 CCL14Q16627 93 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 Q3C1V9 767 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 WDR78Q5VTH9 848 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 METTL16Q86W50 562 aaKnown RBP17.1■□□□□ 0.33
CCDC78-209ENST00000474647 TRMT44Q8IYL2 757 aaKnown RBP17.1■□□□□ 0.33
CCDC78-209ENST00000474647 MIGA1Q8NAN2 632 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 GINM1Q9NU53 330 aa17.1■□□□□ 0.33
CCDC78-209ENST00000474647 TLR7Q9NYK1 1049 aaKnown RBP17.1■□□□□ 0.33
CCDC78-209ENST00000474647 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
CCDC78-209ENST00000474647 PLEKHH3Q7Z736 793 aa17.09■□□□□ 0.33
CCDC78-209ENST00000474647 SSH3Q8TE77 659 aa17.09■□□□□ 0.33
CCDC78-209ENST00000474647 GTF3C2Q8WUA4 911 aaPredicted RBP17.09■□□□□ 0.33
CCDC78-209ENST00000474647 APBA2Q99767 749 aa17.09■□□□□ 0.33
CCDC78-209ENST00000474647 CCDC8Q9H0W5 538 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms