RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CERKLQ49MI3 558 aaPredicted RBP24.67■■□□□ 1.54
SNX13-206ENST00000474067 SLC9C1Q4G0N8 1177 aa24.67■■□□□ 1.54
SNX13-206ENST00000474067 GTF3C2Q8WUA4 911 aaPredicted RBP24.67■■□□□ 1.54
SNX13-206ENST00000474067 SWAP70Q9UH65 585 aa24.67■■□□□ 1.54
SNX13-206ENST00000474067 ADGRA2Q96PE1 1338 aa24.66■■□□□ 1.54
SNX13-206ENST00000474067 PSMC4P43686 418 aa24.66■■□□□ 1.54
SNX13-206ENST00000474067 HMGCS2P54868 508 aa24.66■■□□□ 1.54
SNX13-206ENST00000474067 DNAJC18Q9H819 358 aa24.66■■□□□ 1.54
SNX13-206ENST00000474067 PCDHB15Q9Y5E8 787 aa24.66■■□□□ 1.54
SNX13-206ENST00000474067 NAV1Q8NEY1 1877 aa24.66■■□□□ 1.54
SNX13-206ENST00000474067 SIPA1L1O43166 1804 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 GLRX3O76003 335 aaKnown RBP24.65■■□□□ 1.54
SNX13-206ENST00000474067 SLURP2P0DP57 97 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 CYP2C8P10632 490 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 BCRP11274 1271 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 USP14P54578 494 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 SOX10P56693 466 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 IRX3P78415 501 aaPredicted RBP24.65■■□□□ 1.54
SNX13-206ENST00000474067 ABCB5Q2M3G0 1257 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 KBTBD3Q8NAB2 608 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 ARMC5Q96C12 935 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 CRBNQ96SW2 442 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 MYH7P12883 1935 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 LOC285556D6RIA3 1793 aa24.65■■□□□ 1.54
SNX13-206ENST00000474067 MBD4O95243 580 aa24.64■■□□□ 1.54
SNX13-206ENST00000474067 GDF11O95390 407 aa24.64■■□□□ 1.54
SNX13-206ENST00000474067 HDAC1Q13547 482 aaPredicted RBP24.64■■□□□ 1.54
SNX13-206ENST00000474067 MTMR2Q13614 643 aa24.64■■□□□ 1.54
SNX13-206ENST00000474067 LCORLQ8N3X6 602 aa24.64■■□□□ 1.54
SNX13-206ENST00000474067 EDC3Q96F86 508 aaKnown RBP24.64■■□□□ 1.54
SNX13-206ENST00000474067 FEZ1Q99689 392 aa24.64■■□□□ 1.54
SNX13-206ENST00000474067 TMEM106CQ9BVX2 250 aa24.64■■□□□ 1.54
SNX13-206ENST00000474067 DCP1AQ9NPI6 582 aaPredicted RBP24.64■■□□□ 1.54
SNX13-206ENST00000474067 FAM110CQ1W6H9 321 aa24.63■■□□□ 1.53
SNX13-206ENST00000474067 SLC4A8Q2Y0W8 1093 aa24.63■■□□□ 1.53
SNX13-206ENST00000474067 USP17L2Q6R6M4 530 aa24.63■■□□□ 1.53
SNX13-206ENST00000474067 CCDC84Q86UT8 332 aaPredicted RBP24.63■■□□□ 1.53
SNX13-206ENST00000474067 RAET1EQ8TD07 263 aa24.63■■□□□ 1.53
SNX13-206ENST00000474067 ARMT1Q9H993 441 aa24.63■■□□□ 1.53
SNX13-206ENST00000474067 GH2P01242 217 aa24.62■■□□□ 1.53
SNX13-206ENST00000474067 GNAT2P19087 354 aa24.62■■□□□ 1.53
SNX13-206ENST00000474067 SDR42E1Q8WUS8 393 aa24.62■■□□□ 1.53
SNX13-206ENST00000474067 SRRDQ9UH36 339 aa24.62■■□□□ 1.53
SNX13-206ENST00000474067 HOXA7P31268 230 aaPredicted RBP24.61■■□□□ 1.53
SNX13-206ENST00000474067 RRP1BQ14684 758 aaKnown RBP24.61■■□□□ 1.53
SNX13-206ENST00000474067 RAB3GAP1Q15042 981 aa24.61■■□□□ 1.53
SNX13-206ENST00000474067 APPBP2Q92624 585 aa24.61■■□□□ 1.53
SNX13-206ENST00000474067 COA7Q96BR5 231 aa24.61■■□□□ 1.53
SNX13-206ENST00000474067 RWDD1Q9H446 243 aaPredicted RBP24.61■■□□□ 1.53
SNX13-206ENST00000474067 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.61■■□□□ 1.53
SNX13-206ENST00000474067 ARPP21Q9UBL0 812 aaPredicted RBP24.61■■□□□ 1.53
SNX13-206ENST00000474067 PTCH2Q9Y6C5 1203 aa24.61■■□□□ 1.53
SNX13-206ENST00000474067 SLC4A4Q9Y6R1 1079 aa24.61■■□□□ 1.53
SNX13-206ENST00000474067 DDX60LQ5H9U9 1706 aaKnown RBP24.61■■□□□ 1.53
SNX13-206ENST00000474067 MX1P20591 662 aa24.6■■□□□ 1.53
SNX13-206ENST00000474067 PLCD1P51178 756 aa24.6■■□□□ 1.53
SNX13-206ENST00000474067 TREML2Q5T2D2 321 aa24.6■■□□□ 1.53
SNX13-206ENST00000474067 TRIM47Q96LD4 638 aa24.6■■□□□ 1.53
SNX13-206ENST00000474067 CCDC17Q96LX7 622 aa24.6■■□□□ 1.53
SNX13-206ENST00000474067 MYPNQ86TC9 1320 aa24.6■■□□□ 1.53
SNX13-206ENST00000474067 TNPO2O14787 897 aaKnown RBP24.59■■□□□ 1.53
SNX13-206ENST00000474067 GABPAQ06546 454 aa24.59■■□□□ 1.53
SNX13-206ENST00000474067 GIMAP6Q6P9H5 292 aa24.59■■□□□ 1.53
SNX13-206ENST00000474067 ASCC2Q9H1I8 757 aaPredicted RBP24.59■■□□□ 1.53
SNX13-206ENST00000474067 SH2D4AQ9H788 454 aa24.59■■□□□ 1.53
SNX13-206ENST00000474067 RNF113AO15541 343 aaKnown RBP24.58■■□□□ 1.53
SNX13-206ENST00000474067 ANKRD45Q5TZF3 282 aa24.58■■□□□ 1.53
SNX13-206ENST00000474067 TMEM179Q6ZVK1 233 aa24.58■■□□□ 1.53
SNX13-206ENST00000474067 ANKRD13CQ8N6S4 541 aa24.58■■□□□ 1.53
SNX13-206ENST00000474067 C12orf42Q96LP6 360 aa24.58■■□□□ 1.53
SNX13-206ENST00000474067 ARHGAP39Q9C0H5 1083 aa24.58■■□□□ 1.53
SNX13-206ENST00000474067 KIAA1683Q9H0B3 1180 aa24.58■■□□□ 1.53
SNX13-206ENST00000474067 ZNF287Q9HBT7 754 aa24.58■■□□□ 1.53
SNX13-206ENST00000474067 MPHOSPH10O00566 681 aaKnown RBP24.57■■□□□ 1.52
SNX13-206ENST00000474067 SHMT1P34896 483 aa24.57■■□□□ 1.52
SNX13-206ENST00000474067 UBXN2AP68543 259 aa24.57■■□□□ 1.52
SNX13-206ENST00000474067 TICAM2Q86XR7 235 aa24.57■■□□□ 1.52
SNX13-206ENST00000474067 SLAIN1Q8ND83 568 aa24.57■■□□□ 1.52
SNX13-206ENST00000474067 ZNF333Q96JL9 665 aa24.57■■□□□ 1.52
SNX13-206ENST00000474067 ARHGEF10LQ9HCE6 1279 aa24.56■■□□□ 1.52
SNX13-206ENST00000474067 CAPN2P17655 700 aa24.55■■□□□ 1.52
SNX13-206ENST00000474067 GRK4P32298 578 aa24.55■■□□□ 1.52
SNX13-206ENST00000474067 C12orf60Q5U649 245 aa24.55■■□□□ 1.52
SNX13-206ENST00000474067 CCAR1Q8IX12 1150 aaKnown RBP24.55■■□□□ 1.52
SNX13-206ENST00000474067 FSD1Q9BTV5 496 aa24.55■■□□□ 1.52
SNX13-206ENST00000474067 NACAP1Q9BZK3 213 aa24.55■■□□□ 1.52
SNX13-206ENST00000474067 PUS7LQ9H0K6 701 aaKnown RBP24.55■■□□□ 1.52
SNX13-206ENST00000474067 USP17L15C9J2P7 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L13C9JLJ4 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L12C9JPN9 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L11C9JVI0 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L21D6R901 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L18D6R9N7 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L22D6RA61 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L17D6RBQ6 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L19D6RCP7 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L20D6RJB6 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 USP17L24Q0WX57 530 aa24.54■■□□□ 1.52
SNX13-206ENST00000474067 RBBP6Q7Z6E9 1792 aaKnown RBP24.53■■□□□ 1.52
SNX13-206ENST00000474067 HERVK_113P62684 666 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms