RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CABP5Q9NP86 173 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 ZHX2Q9Y6X8 837 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 RAD50Q92878 1312 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 SMIM22K7EJ46 135 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 IRF6O14896 467 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 FOXP2O15409 715 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 CDK8P49336 464 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 GTF2A2P52657 109 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 INHBEP58166 350 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 PPARAQ07869 468 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 SNAPC2Q13487 334 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 ABCB5Q2M3G0 1257 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 CASC1Q6TDU7 716 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 C16orf86Q6ZW13 317 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 ATAD5Q96QE3 1844 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 THSD7BQ9C0I4 1608 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 MKNK2Q9HBH9 465 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 ZNF287Q9HBT7 754 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 GINM1Q9NU53 330 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.79□□□□□ -0.04
DDX56-209ENST00000473924 ZBTB21Q9ULJ3 1066 aa14.79□□□□□ -0.04
DDX56-209ENST00000473924 LAMB1P07942 1786 aa14.78□□□□□ -0.04
DDX56-209ENST00000473924 USP17L5A8MUK1 530 aa14.78□□□□□ -0.04
DDX56-209ENST00000473924 GH2P01242 217 aa14.78□□□□□ -0.04
DDX56-209ENST00000473924 FGAP02671 866 aa14.78□□□□□ -0.04
DDX56-209ENST00000473924 RAB3GAP1Q15042 981 aa14.78□□□□□ -0.04
DDX56-209ENST00000473924 ALX1Q15699 326 aa14.78□□□□□ -0.04
DDX56-209ENST00000473924 CCDC84Q86UT8 332 aaPredicted RBP14.78□□□□□ -0.04
DDX56-209ENST00000473924 AS3MTQ9HBK9 375 aa14.78□□□□□ -0.04
DDX56-209ENST00000473924 ROBO3Q96MS0 1386 aa14.77□□□□□ -0.04
DDX56-209ENST00000473924 ZMYM6O95789 1325 aa14.77□□□□□ -0.04
DDX56-209ENST00000473924 MYH8P13535 1937 aa14.77□□□□□ -0.04
DDX56-209ENST00000473924 CCL15-CCL14A0A0B4J2E2 113 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 TRIM75PA6NK02 468 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 CETPP11597 493 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 JAG1P78504 1218 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 PDE4BQ07343 736 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 CCL15Q16663 113 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 SHROOM1Q2M3G4 852 aaPredicted RBP14.77□□□□□ -0.05
DDX56-209ENST00000473924 CCDC17Q96LX7 622 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 DSCC1Q9BVC3 393 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 IL25Q9H293 177 aa14.77□□□□□ -0.05
DDX56-209ENST00000473924 CXCL11O14625 94 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 SGSM2O43147 1006 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 CDC45O75419 566 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 TM4SF4P48230 202 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 CTDSPL2Q05D32 466 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 SPP2Q13103 211 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 OTUD7BQ6GQQ9 843 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 ZNF444Q8N0Y2 327 aaPredicted RBP14.76□□□□□ -0.05
DDX56-209ENST00000473924 ZNF280CQ8ND82 737 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 MS4A4AQ96JQ5 239 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 WBP1LQ9NX94 342 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 KCNH4Q9UQ05 1017 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 AFG3L2Q9Y4W6 797 aa14.76□□□□□ -0.05
DDX56-209ENST00000473924 ZNF213O14771 459 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 PRDM1O75626 825 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 HSPA1AP0DMV8 641 aaKnown RBP14.75□□□□□ -0.05
DDX56-209ENST00000473924 HSPA1BP0DMV9 641 aaKnown RBP14.75□□□□□ -0.05
DDX56-209ENST00000473924 AKR1B1P15121 316 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 HAND2P61296 217 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 TMEM179Q6ZVK1 233 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 ESYT1Q9BSJ8 1104 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 TOMM22Q9NS69 142 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 CTNNA3Q9UI47 895 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 ANAPC4Q9UJX5 808 aa14.75□□□□□ -0.05
DDX56-209ENST00000473924 TESPA1A2RU30 521 aaPredicted RBP14.74□□□□□ -0.05
DDX56-209ENST00000473924 ALDH1A1P00352 501 aa14.74□□□□□ -0.05
DDX56-209ENST00000473924 RASA1P20936 1047 aa14.74□□□□□ -0.05
DDX56-209ENST00000473924 SEPT2Q15019 361 aa14.74□□□□□ -0.05
DDX56-209ENST00000473924 IMMTQ16891 758 aaKnown RBP14.74□□□□□ -0.05
DDX56-209ENST00000473924 GADL1Q6ZQY3 521 aa14.74□□□□□ -0.05
DDX56-209ENST00000473924 FASTKD5Q7L8L6 764 aaKnown RBP14.74□□□□□ -0.05
DDX56-209ENST00000473924 IFNL1Q8IU54 200 aa14.74□□□□□ -0.05
DDX56-209ENST00000473924 BRI3BPQ8WY22 251 aa14.74□□□□□ -0.05
DDX56-209ENST00000473924 FEZ1Q99689 392 aa14.74□□□□□ -0.05
DDX56-209ENST00000473924 WDR18Q9BV38 432 aa14.74□□□□□ -0.05
DDX56-209ENST00000473924 PHIPQ8WWQ0 1821 aa14.73□□□□□ -0.05
DDX56-209ENST00000473924 A0A0G2JLL6 359 aaPredicted RBP14.73□□□□□ -0.05
DDX56-209ENST00000473924 USP17L10C9JJH3 530 aa14.73□□□□□ -0.05
DDX56-209ENST00000473924 CA12O43570 354 aa14.73□□□□□ -0.05
DDX56-209ENST00000473924 TRPA1O75762 1119 aa14.73□□□□□ -0.05
DDX56-209ENST00000473924 TSPY3P0CV98 308 aa14.73□□□□□ -0.05
DDX56-209ENST00000473924 TSPY8P0CW00 308 aa14.73□□□□□ -0.05
DDX56-209ENST00000473924 PRRT2Q7Z6L0 340 aaPredicted RBP14.73□□□□□ -0.05
DDX56-209ENST00000473924 RNF186Q9NXI6 227 aa14.73□□□□□ -0.05
DDX56-209ENST00000473924 IGF2BP3O00425 579 aaKnown RBP eCLIP14.72□□□□□ -0.05
DDX56-209ENST00000473924 GUCY1A2P33402 732 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 HMGCS2P54868 508 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 BACE1P56817 501 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 ATP2B2Q01814 1243 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 PTH1RQ03431 593 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 ICA1Q05084 483 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 MTMR2Q13614 643 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 RRP12Q5JTH9 1297 aaKnown RBP14.72□□□□□ -0.05
DDX56-209ENST00000473924 MFSD6Q6ZSS7 791 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 PTPN18Q99952 460 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 RNF41Q9H4P4 317 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms