RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 WNK4Q96J92 1243 aa22.58■■□□□ 1.21
CTDSP1-207ENST00000473420 CCDC17Q96LX7 622 aa22.58■■□□□ 1.21
CTDSP1-207ENST00000473420 TBC1D2Q9BYX2 928 aa22.58■■□□□ 1.21
CTDSP1-207ENST00000473420 WDR33Q9C0J8 1336 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 PTPRAP18433 802 aa22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 VEGFBP49765 207 aa22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 PTH1RQ03431 593 aa22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 PPATQ06203 517 aa22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 SPRYD7Q5W111 196 aa22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 OPTNQ96CV9 577 aa22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 LSG1Q9H089 658 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 U3KPZ7 1027 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-207ENST00000473420 ZNF213O14771 459 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 GDF11O95390 407 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 PCP11498 1178 aaKnown RBP22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 NOGQ13253 232 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 PPIL2Q13356 520 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 IMMTQ16891 758 aaKnown RBP22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 ABCB5Q2M3G0 1257 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 DNAJC5GQ8N7S2 189 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 MKNK2Q9HBH9 465 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 CABP5Q9NP86 173 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 ZBTB21Q9ULJ3 1066 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 PTPRFP10586 1907 aa22.56■■□□□ 1.2
CTDSP1-207ENST00000473420 FGRP09769 529 aa22.55■■□□□ 1.2
CTDSP1-207ENST00000473420 RASA1P20936 1047 aa22.55■■□□□ 1.2
CTDSP1-207ENST00000473420 CTDSPL2Q05D32 466 aa22.55■■□□□ 1.2
CTDSP1-207ENST00000473420 ANO2Q9NQ90 1003 aa22.55■■□□□ 1.2
CTDSP1-207ENST00000473420 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.55■■□□□ 1.2
CTDSP1-207ENST00000473420 GJA5P36382 358 aa22.54■■□□□ 1.2
CTDSP1-207ENST00000473420 MAP2K2P36507 400 aa22.54■■□□□ 1.2
CTDSP1-207ENST00000473420 OTUD5Q96G74 571 aa22.54■■□□□ 1.2
CTDSP1-207ENST00000473420 USP17L5A8MUK1 530 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 ORC4O43929 436 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 GH2P01242 217 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 NT5C2P49902 561 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 HAND2P61296 217 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 JAG1P78504 1218 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 TMEM179Q6ZVK1 233 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 STAG1Q8WVM7 1258 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 CNKSR2Q8WXI2 1034 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 NBPF3Q9H094 633 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 RNF41Q9H4P4 317 aaPredicted RBP22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 AS3MTQ9HBK9 375 aa22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.53■■□□□ 1.2
CTDSP1-207ENST00000473420 GRM1Q13255 1194 aa22.52■■□□□ 1.2
CTDSP1-207ENST00000473420 AKNAD1Q5T1N1 836 aa22.52■■□□□ 1.2
CTDSP1-207ENST00000473420 REM2Q8IYK8 340 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-207ENST00000473420 ZNF444Q8N0Y2 327 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-207ENST00000473420 STK11IPQ8N1F8 1099 aa22.52■■□□□ 1.2
CTDSP1-207ENST00000473420 KCNH4Q9UQ05 1017 aa22.52■■□□□ 1.2
CTDSP1-207ENST00000473420 RBM8AQ9Y5S9 174 aaKnown RBP22.52■■□□□ 1.2
CTDSP1-207ENST00000473420 PLIN4Q96Q06 1357 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 MPHOSPH10O00566 681 aaKnown RBP22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 IRF6O14896 467 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 EPB41L2O43491 1005 aaKnown RBP22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 REC8O95072 547 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 AKR1B1P15121 316 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 GTF2A2P52657 109 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 SHROOM1Q2M3G4 852 aaPredicted RBP22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 MFSD6Q6ZSS7 791 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 TBC1D10CQ8IV04 446 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 WDR18Q9BV38 432 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 AFG3L2Q9Y4W6 797 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 ZHX2Q9Y6X8 837 aa22.51■■□□□ 1.19
CTDSP1-207ENST00000473420 LOC285556D6RIA3 1793 aa22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 MANSC4A6NHS7 340 aaPredicted RBP22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 CXCL11O14625 94 aa22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 EIF5BO60841 1220 aaKnown RBP22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 AOC2O75106 756 aa22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 PRDM1O75626 825 aa22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 CYP21A2P08686 494 aa22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 GUCY1A2P33402 732 aa22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 TACC3Q9Y6A5 838 aa22.5■■□□□ 1.19
CTDSP1-207ENST00000473420 INHBEP58166 350 aa22.49■■□□□ 1.19
CTDSP1-207ENST00000473420 KIF23Q02241 960 aaPredicted RBP22.49■■□□□ 1.19
CTDSP1-207ENST00000473420 SREBF2Q12772 1141 aa22.49■■□□□ 1.19
CTDSP1-207ENST00000473420 MKRN3Q13064 507 aaKnown RBP22.49■■□□□ 1.19
CTDSP1-207ENST00000473420 SNAPC2Q13487 334 aa22.49■■□□□ 1.19
CTDSP1-207ENST00000473420 RAB3GAP1Q15042 981 aa22.49■■□□□ 1.19
CTDSP1-207ENST00000473420 ZNF280CQ8ND82 737 aa22.49■■□□□ 1.19
CTDSP1-207ENST00000473420 TESPA1A2RU30 521 aaPredicted RBP22.48■■□□□ 1.19
CTDSP1-207ENST00000473420 SEPT2Q15019 361 aa22.48■■□□□ 1.19
CTDSP1-207ENST00000473420 NECTIN1Q15223 517 aa22.48■■□□□ 1.19
CTDSP1-207ENST00000473420 CCDC84Q86UT8 332 aaPredicted RBP22.48■■□□□ 1.19
CTDSP1-207ENST00000473420 NEDD1Q8NHV4 660 aa22.48■■□□□ 1.19
CTDSP1-207ENST00000473420 MS4A4AQ96JQ5 239 aa22.48■■□□□ 1.19
CTDSP1-207ENST00000473420 CNNM2Q9H8M5 875 aa22.48■■□□□ 1.19
CTDSP1-207ENST00000473420 MYH4Q9Y623 1939 aa22.48■■□□□ 1.19
CTDSP1-207ENST00000473420 TSPY3P0CV98 308 aa22.47■■□□□ 1.19
CTDSP1-207ENST00000473420 TSPY8P0CW00 308 aa22.47■■□□□ 1.19
CTDSP1-207ENST00000473420 CETPP11597 493 aa22.47■■□□□ 1.19
CTDSP1-207ENST00000473420 ZIC5Q96T25 663 aa22.47■■□□□ 1.19
CTDSP1-207ENST00000473420 KANSL2Q9H9L4 492 aa22.47■■□□□ 1.19
CTDSP1-207ENST00000473420 INCENPQ9NQS7 918 aa22.47■■□□□ 1.19
CTDSP1-207ENST00000473420 TOMM22Q9NS69 142 aa22.47■■□□□ 1.19
CTDSP1-207ENST00000473420 IGKV6D-41A0A0C4DH26 115 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 A0A0G2JLL6 359 aaPredicted RBP22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 TSPY2A6NKD2 308 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms