RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 TNFAIP1Q13829 316 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 KIF22Q14807 665 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 SWT1Q5T5J6 900 aaKnown RBP7.84□□□□□ -1.15
HDAC1-205ENST00000472928 DMRTA1Q5VZB9 504 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 HELBQ8NG08 1087 aaPredicted RBP7.84□□□□□ -1.15
HDAC1-205ENST00000472928 POM121Q96HA1 1249 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 TDRD3Q9H7E2 651 aaKnown RBP7.84□□□□□ -1.15
HDAC1-205ENST00000472928 SNRKQ9NRH2 765 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 RIPOR2Q9Y4F9 1068 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 NCOR1O75376 2440 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 SPTBN5Q9NRC6 3674 aaKnown RBP7.84□□□□□ -1.15
HDAC1-205ENST00000472928 ARAP2Q8WZ64 1704 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 UTYO14607 1347 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 FAM205AQ6ZU69 1335 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 TCP10L2B9ZVM9 353 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 GRK4P32298 578 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 PSMC4P43686 418 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 RGS3P49796 1198 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 RBM5P52756 815 aaKnown RBP eCLIP7.83□□□□□ -1.16
HDAC1-205ENST00000472928 SNAPC2Q13487 334 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 GCKRQ14397 625 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 QPCTQ16769 361 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 CSPP1Q1MSJ5 1256 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 ZNF804AQ7Z570 1209 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 ERO1BQ86YB8 467 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 RPAP2Q8IXW5 612 aaPredicted RBP7.83□□□□□ -1.16
HDAC1-205ENST00000472928 SMC5Q8IY18 1101 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 U2AF1L4Q8WU68 220 aaKnown RBP7.83□□□□□ -1.16
HDAC1-205ENST00000472928 SUCLG2Q96I99 432 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 MPHOSPH8Q99549 860 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 RNF208Q9H0X6 261 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 STAP2Q9UGK3 403 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 SEPT9Q9UHD8 586 aaPredicted RBP7.83□□□□□ -1.16
HDAC1-205ENST00000472928 CPA4Q9UI42 421 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 SERPINA10Q9UK55 444 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 CSADQ9Y600 493 aa7.83□□□□□ -1.16
HDAC1-205ENST00000472928 PRUNE2Q8WUY3 3088 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 MYPNQ86TC9 1320 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 PNMA6EA0A0J9YXQ4 647 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 LILRB3O75022 631 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 WDHD1O75717 1129 aaPredicted RBP7.82□□□□□ -1.16
HDAC1-205ENST00000472928 PBX2P40425 430 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 USP46P62068 366 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 PRKCZQ05513 592 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 PPIL2Q13356 520 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 MOGSQ13724 837 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 GRIK5Q16478 980 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 RAET1EQ8TD07 263 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 ZKSCAN4Q969J2 545 aaPredicted RBP7.82□□□□□ -1.16
HDAC1-205ENST00000472928 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
HDAC1-205ENST00000472928 UNC93B1Q9H1C4 597 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 BICC1Q9H694 974 aaKnown RBP7.82□□□□□ -1.16
HDAC1-205ENST00000472928 TTF2Q9UNY4 1162 aaKnown RBP7.82□□□□□ -1.16
HDAC1-205ENST00000472928 HDAC5Q9UQL6 1122 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 ALPK3Q96L96 1907 aa7.82□□□□□ -1.16
HDAC1-205ENST00000472928 SRGAP3O43295 1099 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 HOXA2O43364 376 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 RAD21O60216 631 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 ST18O60284 1047 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 SGPL1O95470 568 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 CACNB3P54284 484 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 ATP8B2P98198 1209 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 MFSD14BQ5SR56 506 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 LHX8Q68G74 356 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 Q7L0L9 218 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 ANKRD23Q86SG2 305 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 DEFB123Q8N688 67 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 WRNIP1Q96S55 665 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 GDF15Q99988 308 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 LNPKQ9C0E8 428 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 VPS9D1Q9Y2B5 631 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 STXBP5LQ9Y2K9 1186 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 MYH13Q9UKX3 1938 aa7.81□□□□□ -1.16
HDAC1-205ENST00000472928 MYH7P12883 1935 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 DOCK3Q8IZD9 2030 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 ANKRD18BA2A2Z9 1011 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 PDHXO00330 501 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 FMNL1O95466 1100 aaPredicted RBP7.8□□□□□ -1.16
HDAC1-205ENST00000472928 BCRP11274 1271 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 HOXD10P28358 340 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 INPP5BP32019 993 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 BMP8BP34820 402 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 CRKP46108 304 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 TNNI2P48788 182 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 EMP3P54852 163 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 UBXN2AP68543 259 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 NUCB1Q02818 461 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 MTX1Q13505 466 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 TDRD7Q8NHU6 1098 aaKnown RBP7.8□□□□□ -1.16
HDAC1-205ENST00000472928 SSH3Q8TE77 659 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 KAZALD1Q96I82 304 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 ARID3AQ99856 593 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 MTMR10Q9NXD2 777 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 BIN2Q9UBW5 565 aaPredicted RBP7.8□□□□□ -1.16
HDAC1-205ENST00000472928 GABRQQ9UN88 632 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 KCNH4Q9UQ05 1017 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 EXOC6BQ9Y2D4 811 aa7.8□□□□□ -1.16
HDAC1-205ENST00000472928 EYSQ5T1H1 3165 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 INHAP05111 366 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 GYG1P46976 350 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms