RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CYP4F22Q6NT55 531 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 DNAJC5GQ8N7S2 189 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 DYNLL2Q96FJ2 89 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 WNK4Q96J92 1243 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 ELP3Q9H9T3 547 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 CABP5Q9NP86 173 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 U3KPZ7 1027 aaPredicted RBP23.76■■□□□ 1.39
SF1-213ENST00000472725 ZNF213O14771 459 aa23.75■■□□□ 1.39
SF1-213ENST00000472725 VEGFBP49765 207 aa23.75■■□□□ 1.39
SF1-213ENST00000472725 PPIL2Q13356 520 aa23.75■■□□□ 1.39
SF1-213ENST00000472725 MAP4K1Q92918 833 aa23.75■■□□□ 1.39
SF1-213ENST00000472725 OPTNQ96CV9 577 aa23.75■■□□□ 1.39
SF1-213ENST00000472725 MKNK2Q9HBH9 465 aa23.75■■□□□ 1.39
SF1-213ENST00000472725 THSD7BQ9C0I4 1608 aa23.74■■□□□ 1.39
SF1-213ENST00000472725 FGRP09769 529 aa23.74■■□□□ 1.39
SF1-213ENST00000472725 PTPRAP18433 802 aa23.74■■□□□ 1.39
SF1-213ENST00000472725 EVX2Q03828 476 aa23.74■■□□□ 1.39
SF1-213ENST00000472725 RRP1BQ14684 758 aaKnown RBP23.74■■□□□ 1.39
SF1-213ENST00000472725 IMMTQ16891 758 aaKnown RBP23.74■■□□□ 1.39
SF1-213ENST00000472725 ABCB5Q2M3G0 1257 aa23.74■■□□□ 1.39
SF1-213ENST00000472725 RNF41Q9H4P4 317 aaPredicted RBP23.74■■□□□ 1.39
SF1-213ENST00000472725 EPB41L2O43491 1005 aaKnown RBP23.73■■□□□ 1.39
SF1-213ENST00000472725 INHBEP58166 350 aa23.73■■□□□ 1.39
SF1-213ENST00000472725 SLC44A5Q8NCS7 719 aa23.73■■□□□ 1.39
SF1-213ENST00000472725 AS3MTQ9HBK9 375 aa23.73■■□□□ 1.39
SF1-213ENST00000472725 ZBTB21Q9ULJ3 1066 aa23.73■■□□□ 1.39
SF1-213ENST00000472725 USP17L5A8MUK1 530 aa23.72■■□□□ 1.39
SF1-213ENST00000472725 CXCL11O14625 94 aa23.72■■□□□ 1.39
SF1-213ENST00000472725 PTH1RQ03431 593 aa23.72■■□□□ 1.39
SF1-213ENST00000472725 TMEM179Q6ZVK1 233 aa23.72■■□□□ 1.39
SF1-213ENST00000472725 ZNF444Q8N0Y2 327 aaPredicted RBP23.72■■□□□ 1.39
SF1-213ENST00000472725 LSG1Q9H089 658 aaKnown RBP23.72■■□□□ 1.39
SF1-213ENST00000472725 PHIPQ8WWQ0 1821 aa23.72■■□□□ 1.39
SF1-213ENST00000472725 MANSC4A6NHS7 340 aaPredicted RBP23.71■■□□□ 1.39
SF1-213ENST00000472725 SMIM22K7EJ46 135 aa23.71■■□□□ 1.39
SF1-213ENST00000472725 ORC4O43929 436 aa23.71■■□□□ 1.39
SF1-213ENST00000472725 REC8O95072 547 aa23.71■■□□□ 1.39
SF1-213ENST00000472725 OTUD5Q96G74 571 aa23.71■■□□□ 1.39
SF1-213ENST00000472725 WDR18Q9BV38 432 aa23.71■■□□□ 1.39
SF1-213ENST00000472725 ANO2Q9NQ90 1003 aa23.71■■□□□ 1.39
SF1-213ENST00000472725 KCNH4Q9UQ05 1017 aa23.71■■□□□ 1.39
SF1-213ENST00000472725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.71■■□□□ 1.39
SF1-213ENST00000472725 ZHX2Q9Y6X8 837 aa23.71■■□□□ 1.39
SF1-213ENST00000472725 GDF11O95390 407 aa23.7■■□□□ 1.38
SF1-213ENST00000472725 GH2P01242 217 aa23.7■■□□□ 1.38
SF1-213ENST00000472725 RASA1P20936 1047 aa23.7■■□□□ 1.38
SF1-213ENST00000472725 GTF2A2P52657 109 aa23.7■■□□□ 1.38
SF1-213ENST00000472725 AKNAD1Q5T1N1 836 aa23.7■■□□□ 1.38
SF1-213ENST00000472725 STAG1Q8WVM7 1258 aa23.7■■□□□ 1.38
SF1-213ENST00000472725 AFG3L2Q9Y4W6 797 aa23.7■■□□□ 1.38
SF1-213ENST00000472725 GJA5P36382 358 aa23.69■■□□□ 1.38
SF1-213ENST00000472725 CTDSPL2Q05D32 466 aa23.69■■□□□ 1.38
SF1-213ENST00000472725 SREBF2Q12772 1141 aa23.69■■□□□ 1.38
SF1-213ENST00000472725 SNAPC2Q13487 334 aa23.69■■□□□ 1.38
SF1-213ENST00000472725 MFSD6Q6ZSS7 791 aa23.69■■□□□ 1.38
SF1-213ENST00000472725 GREB1LQ9C091 1923 aaPredicted RBP23.69■■□□□ 1.38
SF1-213ENST00000472725 PLIN4Q96Q06 1357 aa23.68■■□□□ 1.38
SF1-213ENST00000472725 TESPA1A2RU30 521 aaPredicted RBP23.68■■□□□ 1.38
SF1-213ENST00000472725 IRF6O14896 467 aa23.68■■□□□ 1.38
SF1-213ENST00000472725 PPP4R3BQ5MIZ7 849 aa23.68■■□□□ 1.38
SF1-213ENST00000472725 ZNF280CQ8ND82 737 aa23.68■■□□□ 1.38
SF1-213ENST00000472725 RBM8AQ9Y5S9 174 aaKnown RBP23.68■■□□□ 1.38
SF1-213ENST00000472725 MPHOSPH10O00566 681 aaKnown RBP23.67■■□□□ 1.38
SF1-213ENST00000472725 AKR1B1P15121 316 aa23.67■■□□□ 1.38
SF1-213ENST00000472725 TM4SF4P48230 202 aa23.67■■□□□ 1.38
SF1-213ENST00000472725 HAND2P61296 217 aa23.67■■□□□ 1.38
SF1-213ENST00000472725 JAG1P78504 1218 aa23.67■■□□□ 1.38
SF1-213ENST00000472725 GRM1Q13255 1194 aa23.67■■□□□ 1.38
SF1-213ENST00000472725 CNKSR2Q8WXI2 1034 aa23.67■■□□□ 1.38
SF1-213ENST00000472725 CNNM2Q9H8M5 875 aa23.67■■□□□ 1.38
SF1-213ENST00000472725 KANSL2Q9H9L4 492 aa23.67■■□□□ 1.38
SF1-213ENST00000472725 C19orf81C9J6K1 198 aa23.66■■□□□ 1.38
SF1-213ENST00000472725 CETPP11597 493 aa23.66■■□□□ 1.38
SF1-213ENST00000472725 KIF23Q02241 960 aaPredicted RBP23.66■■□□□ 1.38
SF1-213ENST00000472725 RAB3GAP1Q15042 981 aa23.66■■□□□ 1.38
SF1-213ENST00000472725 RNF20Q5VTR2 975 aa23.66■■□□□ 1.38
SF1-213ENST00000472725 JMYQ8N9B5 988 aa23.66■■□□□ 1.38
SF1-213ENST00000472725 NEDD1Q8NHV4 660 aa23.66■■□□□ 1.38
SF1-213ENST00000472725 MS4A4AQ96JQ5 239 aa23.66■■□□□ 1.38
SF1-213ENST00000472725 NBPF3Q9H094 633 aa23.66■■□□□ 1.38
SF1-213ENST00000472725 PTPRFP10586 1907 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 AOC2O75106 756 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 CYP21A2P08686 494 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 GUCY1A2P33402 732 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 MAP2K1Q02750 393 aaPredicted RBP23.65■■□□□ 1.38
SF1-213ENST00000472725 SEPT2Q15019 361 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 NECTIN1Q15223 517 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 TBC1D10CQ8IV04 446 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 STK11IPQ8N1F8 1099 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 KRT23Q9C075 422 aa23.65■■□□□ 1.38
SF1-213ENST00000472725 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.65■■□□□ 1.38
SF1-213ENST00000472725 A0A0G2JLL6 359 aaPredicted RBP23.64■■□□□ 1.37
SF1-213ENST00000472725 USP17L10C9JJH3 530 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 PRDM1O75626 825 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 TSPY3P0CV98 308 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 TSPY8P0CW00 308 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 SPP2Q13103 211 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 SH3D19Q5HYK7 790 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 FASTKD5Q7L8L6 764 aaKnown RBP23.64■■□□□ 1.37
SF1-213ENST00000472725 PRRT2Q7Z6L0 340 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms