RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PFASO15067 1338 aa11.57□□□□□ -0.56
VCL-204ENST00000472585 CAP2P40123 477 aa11.56□□□□□ -0.56
VCL-204ENST00000472585 PABPC4Q13310 644 aaKnown RBP eCLIP11.56□□□□□ -0.56
VCL-204ENST00000472585 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
VCL-204ENST00000472585 DZIP1Q86YF9 867 aaKnown RBP11.56□□□□□ -0.56
VCL-204ENST00000472585 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
VCL-204ENST00000472585 TRIB2Q92519 343 aa11.56□□□□□ -0.56
VCL-204ENST00000472585 P2RX7Q99572 595 aaKnown RBP11.56□□□□□ -0.56
VCL-204ENST00000472585 TXNRD2Q9NNW7 524 aa11.56□□□□□ -0.56
VCL-204ENST00000472585 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
VCL-204ENST00000472585 EYSQ5T1H1 3165 aa11.56□□□□□ -0.56
VCL-204ENST00000472585 PDS5AQ29RF7 1337 aaKnown RBP11.56□□□□□ -0.56
VCL-204ENST00000472585 PRUNE2Q8WUY3 3088 aa11.56□□□□□ -0.56
VCL-204ENST00000472585 DNAH12Q6ZR08 3092 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 MYH2Q9UKX2 1941 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 CYP2B6P20813 491 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 COL9A1P20849 921 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 Q3C1V9 767 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 MAP3K21Q5TCX8 1036 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 ERICH6Q7L0X2 663 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 ZGPATQ8N5A5 531 aaKnown RBP11.55□□□□□ -0.56
VCL-204ENST00000472585 PROCA1Q8NCQ7 364 aaPredicted RBP11.55□□□□□ -0.56
VCL-204ENST00000472585 CDX2Q99626 313 aaPredicted RBP11.55□□□□□ -0.56
VCL-204ENST00000472585 OSBPL5Q9H0X9 879 aaPredicted RBP11.55□□□□□ -0.56
VCL-204ENST00000472585 DNAJC18Q9H819 358 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 PRKAG2Q9UGJ0 569 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 TNNQ9UQP3 1299 aa11.55□□□□□ -0.56
VCL-204ENST00000472585 CLCN6P51797 869 aa11.54□□□□□ -0.56
VCL-204ENST00000472585 LRRC26Q2I0M4 334 aa11.54□□□□□ -0.56
VCL-204ENST00000472585 SPTY2D1Q68D10 685 aaPredicted RBP11.54□□□□□ -0.56
VCL-204ENST00000472585 SH3RF3Q8TEJ3 882 aaPredicted RBP11.54□□□□□ -0.56
VCL-204ENST00000472585 USP6NLQ92738 828 aa11.54□□□□□ -0.56
VCL-204ENST00000472585 RBPJLQ9UBG7 517 aa11.54□□□□□ -0.56
VCL-204ENST00000472585 MORF4L1Q9UBU8 362 aa11.54□□□□□ -0.56
VCL-204ENST00000472585 PLXNB2O15031 1838 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 COL2A1P02458 1487 aaPredicted RBP11.53□□□□□ -0.56
VCL-204ENST00000472585 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
VCL-204ENST00000472585 USP17L5A8MUK1 530 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 COL6A1P12109 1028 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 MCAMP43121 646 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 MTX1Q13505 466 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 PDE3AQ14432 1141 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 CCL14Q16627 93 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 LHX8Q68G74 356 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 ADGRA1Q86SQ6 560 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 CCAR1Q8IX12 1150 aaKnown RBP11.53□□□□□ -0.56
VCL-204ENST00000472585 TRMT44Q8IYL2 757 aaKnown RBP11.53□□□□□ -0.56
VCL-204ENST00000472585 SPATA5Q8NB90 893 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 NEUROD6Q96NK8 337 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 NUDT12Q9BQG2 462 aa11.53□□□□□ -0.56
VCL-204ENST00000472585 SPTBN5Q9NRC6 3674 aaKnown RBP11.53□□□□□ -0.56
VCL-204ENST00000472585 SRGAP3O43295 1099 aa11.52□□□□□ -0.57
VCL-204ENST00000472585 ZKSCAN1P17029 563 aaPredicted RBP11.52□□□□□ -0.57
VCL-204ENST00000472585 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
VCL-204ENST00000472585 HOXA7P31268 230 aaPredicted RBP11.52□□□□□ -0.57
VCL-204ENST00000472585 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.57
VCL-204ENST00000472585 MTMR2Q13614 643 aa11.52□□□□□ -0.57
VCL-204ENST00000472585 METTL16Q86W50 562 aaKnown RBP11.52□□□□□ -0.57
VCL-204ENST00000472585 SLF2Q8IX21 1173 aa11.52□□□□□ -0.57
VCL-204ENST00000472585 SOCS4Q8WXH5 440 aa11.52□□□□□ -0.57
VCL-204ENST00000472585 PHF12Q96QT6 1004 aa11.52□□□□□ -0.57
VCL-204ENST00000472585 WDR18Q9BV38 432 aa11.52□□□□□ -0.57
VCL-204ENST00000472585 SENP6Q9GZR1 1112 aaPredicted RBP11.52□□□□□ -0.57
VCL-204ENST00000472585 PORCNQ9H237 461 aa11.52□□□□□ -0.57
VCL-204ENST00000472585 SEMA6BQ9H3T3 888 aa11.52□□□□□ -0.57
VCL-204ENST00000472585 LOC285556D6RIA3 1793 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 PNMA6EA0A0J9YXQ4 647 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 GABBR2O75899 941 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 XRCC5P13010 732 aaKnown RBP11.51□□□□□ -0.57
VCL-204ENST00000472585 FOSL2P15408 326 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
VCL-204ENST00000472585 RARSP54136 660 aaKnown RBP11.51□□□□□ -0.57
VCL-204ENST00000472585 BACE1P56817 501 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 IRX3P78415 501 aaPredicted RBP11.51□□□□□ -0.57
VCL-204ENST00000472585 MVPQ14764 893 aaKnown RBP11.51□□□□□ -0.57
VCL-204ENST00000472585 MORN1Q5T089 497 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 TEX11Q8IYF3 940 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 MYLIPQ8WY64 445 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 SNRKQ9NRH2 765 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 EMILIN3Q9NT22 766 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 RAI14Q9P0K7 980 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 AKAP2Q9Y2D5 859 aa11.51□□□□□ -0.57
VCL-204ENST00000472585 TNFRSF10AO00220 468 aa11.5□□□□□ -0.57
VCL-204ENST00000472585 CNMDO75829 334 aa11.5□□□□□ -0.57
VCL-204ENST00000472585 LDHCP07864 332 aa11.5□□□□□ -0.57
VCL-204ENST00000472585 HERVK_113P62684 666 aa11.5□□□□□ -0.57
VCL-204ENST00000472585 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
VCL-204ENST00000472585 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
VCL-204ENST00000472585 AATFQ9NY61 560 aaKnown RBP eCLIP11.5□□□□□ -0.57
VCL-204ENST00000472585 FLRT1Q9NZU1 646 aa11.5□□□□□ -0.57
VCL-204ENST00000472585 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
VCL-204ENST00000472585 FRMPD3Q5JV73 1810 aa11.5□□□□□ -0.57
VCL-204ENST00000472585 MAST2Q6P0Q8 1798 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 GDF11O95390 407 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 MAP4K4O95819 1239 aaPredicted RBP11.49□□□□□ -0.57
VCL-204ENST00000472585 CYP2E1P05181 493 aaPredicted RBP11.49□□□□□ -0.57
VCL-204ENST00000472585 RGS2P41220 211 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms