RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
UBE2F-220ENST00000472479 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
UBE2F-220ENST00000472479 GDF11O95390 407 aa12.41□□□□□ -0.42
UBE2F-220ENST00000472479 MCM5P33992 734 aa12.41□□□□□ -0.42
UBE2F-220ENST00000472479 RAB3GAP1Q15042 981 aa12.41□□□□□ -0.42
UBE2F-220ENST00000472479 CHST3Q7LGC8 479 aa12.41□□□□□ -0.42
UBE2F-220ENST00000472479 TBC1D32Q96NH3 1257 aa12.41□□□□□ -0.42
UBE2F-220ENST00000472479 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
UBE2F-220ENST00000472479 CSADQ9Y600 493 aa12.41□□□□□ -0.42
UBE2F-220ENST00000472479 IFIT3O14879 490 aaKnown RBP12.4□□□□□ -0.42
UBE2F-220ENST00000472479 PRC1O43663 620 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 ORC4O43929 436 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 RAD21O60216 631 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 RBM25P49756 843 aaKnown RBP12.4□□□□□ -0.42
UBE2F-220ENST00000472479 NEK4P51957 841 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 MAP3K9P80192 1104 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 GABPAQ06546 454 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 ADCK5Q3MIX3 580 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 TSGA10IPQ3SY00 556 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 CCDC178Q5BJE1 867 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 NFXL1Q6ZNB6 911 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
UBE2F-220ENST00000472479 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 FZD1Q9UP38 647 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 TAF6LQ9Y6J9 622 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 COL2A1P02458 1487 aaPredicted RBP12.4□□□□□ -0.42
UBE2F-220ENST00000472479 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 NEDD4P46934 1319 aa12.4□□□□□ -0.42
UBE2F-220ENST00000472479 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 GH2P01242 217 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 AKR1B1P15121 316 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 RASA1P20936 1047 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 SHMT1P34896 483 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 FMR1Q06787 632 aaKnown RBP eCLIP12.4□□□□□ -0.43
UBE2F-220ENST00000472479 TATDN1Q6P1N9 297 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 STOX1Q6ZVD7 989 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 DHX32Q7L7V1 743 aaKnown RBP12.4□□□□□ -0.43
UBE2F-220ENST00000472479 RBM46Q8TBY0 533 aaKnown RBP12.4□□□□□ -0.43
UBE2F-220ENST00000472479 KCNB2Q92953 911 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 NBPF3Q9H094 633 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 GBA2Q9HCG7 927 aaPredicted RBP12.4□□□□□ -0.43
UBE2F-220ENST00000472479 ZSWIM5Q9P217 1185 aa12.4□□□□□ -0.43
UBE2F-220ENST00000472479 BAZ2AQ9UIF9 1905 aaKnown RBP12.4□□□□□ -0.43
UBE2F-220ENST00000472479 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 MYH1P12882 1939 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 CTNND1O60716 968 aaKnown RBP12.39□□□□□ -0.43
UBE2F-220ENST00000472479 USP2O75604 605 aaPredicted RBP12.39□□□□□ -0.43
UBE2F-220ENST00000472479 CPA1P15085 419 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 CAP2P40123 477 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 NT5C2P49902 561 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 RABEP1Q15276 862 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 TMEM67Q5HYA8 995 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 PPP4R3BQ5MIZ7 849 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 SYNE3Q6ZMZ3 975 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 TMEM179Q6ZVK1 233 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 RUFY3Q7L099 469 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
UBE2F-220ENST00000472479 TCEANC2Q96MN5 208 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 TM6SF1Q9BZW5 370 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
UBE2F-220ENST00000472479 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
UBE2F-220ENST00000472479 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
UBE2F-220ENST00000472479 ROBO3Q96MS0 1386 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 ST18O60284 1047 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 ASNSP08243 561 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 RPS6KB1P23443 525 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 INPP5BP32019 993 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 FSTL1Q12841 308 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 WTAPQ15007 396 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 MOB2Q70IA6 237 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 NOL8Q76FK4 1167 aaKnown RBP12.38□□□□□ -0.43
UBE2F-220ENST00000472479 CYB5R4Q7L1T6 521 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 METTL16Q86W50 562 aaKnown RBP12.38□□□□□ -0.43
UBE2F-220ENST00000472479 ANKRD13AQ8IZ07 590 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 NEDD1Q8NHV4 660 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 ZSCAN10Q96SZ4 725 aaPredicted RBP12.38□□□□□ -0.43
UBE2F-220ENST00000472479 LRRC2Q9BYS8 371 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 DNAJC18Q9H819 358 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 ZSWIM6Q9HCJ5 1215 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 MTMR7Q9Y216 660 aa12.38□□□□□ -0.43
UBE2F-220ENST00000472479 CCDC69A6NI79 296 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 ITGBL1O95965 494 aaPredicted RBP12.37□□□□□ -0.43
UBE2F-220ENST00000472479 FGRP09769 529 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 SEPT2Q15019 361 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 IFIT1BQ5T764 474 aaKnown RBP12.37□□□□□ -0.43
UBE2F-220ENST00000472479 Q6ZUG5 572 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
UBE2F-220ENST00000472479 SCYL3Q8IZE3 742 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 TMEM87BQ96K49 555 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 KANSL2Q9H9L4 492 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 ELP3Q9H9T3 547 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 AS3MTQ9HBK9 375 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 ARHGEF10LQ9HCE6 1279 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 CLIP2Q9UDT6 1046 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 ABT1Q9ULW3 272 aaKnown RBP12.37□□□□□ -0.43
UBE2F-220ENST00000472479 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
UBE2F-220ENST00000472479 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms