RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 OTUD5Q96G74 571 aa14.66□□□□□ -0.06
PRKCB-205ENST00000472066 LSG1Q9H089 658 aaKnown RBP14.66□□□□□ -0.06
PRKCB-205ENST00000472066 MKNK2Q9HBH9 465 aa14.66□□□□□ -0.06
PRKCB-205ENST00000472066 GINM1Q9NU53 330 aa14.66□□□□□ -0.06
PRKCB-205ENST00000472066 NAV1Q8NEY1 1877 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 AOC2O75106 756 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 GH2P01242 217 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 ASNSP08243 561 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 ZBTB48P10074 688 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-205ENST00000472066 HAND2P61296 217 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 PDE4BQ07343 736 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
PRKCB-205ENST00000472066 NOGQ13253 232 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 ABCB5Q2M3G0 1257 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 CCDC17Q96LX7 622 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 ZNF287Q9HBT7 754 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 CABP5Q9NP86 173 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 INCENPQ9NQS7 918 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-205ENST00000472066 ZBTB21Q9ULJ3 1066 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 TACC3Q9Y6A5 838 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 ZHX2Q9Y6X8 837 aa14.65□□□□□ -0.06
PRKCB-205ENST00000472066 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-205ENST00000472066 AK9Q5TCS8 1911 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 SIPA1L1O43166 1804 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 USP17L5A8MUK1 530 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 RASA1P20936 1047 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 MAP2K2P36507 400 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 KIF23Q02241 960 aaPredicted RBP14.64□□□□□ -0.07
PRKCB-205ENST00000472066 PPIL2Q13356 520 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
PRKCB-205ENST00000472066 CCDC84Q86UT8 332 aaPredicted RBP14.64□□□□□ -0.07
PRKCB-205ENST00000472066 ZNF444Q8N0Y2 327 aaPredicted RBP14.64□□□□□ -0.07
PRKCB-205ENST00000472066 ZIC5Q96T25 663 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 NBPF3Q9H094 633 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 ANO2Q9NQ90 1003 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.64□□□□□ -0.07
PRKCB-205ENST00000472066 MYH1P12882 1939 aa14.64□□□□□ -0.07
PRKCB-205ENST00000472066 MPHOSPH10O00566 681 aaKnown RBP14.63□□□□□ -0.07
PRKCB-205ENST00000472066 IRF6O14896 467 aa14.63□□□□□ -0.07
PRKCB-205ENST00000472066 PRDM1O75626 825 aa14.63□□□□□ -0.07
PRKCB-205ENST00000472066 FGRP09769 529 aa14.63□□□□□ -0.07
PRKCB-205ENST00000472066 AKR1B1P15121 316 aa14.63□□□□□ -0.07
PRKCB-205ENST00000472066 GUCY1A2P33402 732 aa14.63□□□□□ -0.07
PRKCB-205ENST00000472066 AFG3L2Q9Y4W6 797 aa14.63□□□□□ -0.07
PRKCB-205ENST00000472066 RBM8AQ9Y5S9 174 aaKnown RBP14.63□□□□□ -0.07
PRKCB-205ENST00000472066 CEP350Q5VT06 3117 aa14.63□□□□□ -0.07
PRKCB-205ENST00000472066 ORC4O43929 436 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 SEPT2Q15019 361 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 RAB3GAP1Q15042 981 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 AKNAD1Q5T1N1 836 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 MFSD6Q6ZSS7 791 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 TMEM179Q6ZVK1 233 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 TBC1D10CQ8IV04 446 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 STAG1Q8WVM7 1258 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 MS4A4AQ96JQ5 239 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 WDR18Q9BV38 432 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 TBC1D2Q9BYX2 928 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 KCNH4Q9UQ05 1017 aa14.62□□□□□ -0.07
PRKCB-205ENST00000472066 BAZ2AQ9UIF9 1905 aaKnown RBP14.61□□□□□ -0.07
PRKCB-205ENST00000472066 MANSC4A6NHS7 340 aaPredicted RBP14.61□□□□□ -0.07
PRKCB-205ENST00000472066 CXCL11O14625 94 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 CYP21A2P08686 494 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 PCP11498 1178 aaKnown RBP14.61□□□□□ -0.07
PRKCB-205ENST00000472066 GTF2A2P52657 109 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 SPP2Q13103 211 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 SNAPC2Q13487 334 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 NECTIN1Q15223 517 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 FAM47AQ5JRC9 791 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 ZNF280CQ8ND82 737 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRKCB-205ENST00000472066 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
PRKCB-205ENST00000472066 AS3MTQ9HBK9 375 aa14.61□□□□□ -0.07
PRKCB-205ENST00000472066 TESPA1A2RU30 521 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-205ENST00000472066 TRIM75PA6NK02 468 aa14.6□□□□□ -0.07
PRKCB-205ENST00000472066 RANBP6O60518 1105 aaKnown RBP14.6□□□□□ -0.07
PRKCB-205ENST00000472066 TM4SF4P48230 202 aa14.6□□□□□ -0.07
PRKCB-205ENST00000472066 INHBEP58166 350 aa14.6□□□□□ -0.07
PRKCB-205ENST00000472066 TFAP4Q01664 338 aa14.6□□□□□ -0.07
PRKCB-205ENST00000472066 SIAH1Q8IUQ4 282 aa14.6□□□□□ -0.07
PRKCB-205ENST00000472066 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-205ENST00000472066 NEDD1Q8NHV4 660 aa14.6□□□□□ -0.07
PRKCB-205ENST00000472066 TOMM22Q9NS69 142 aa14.6□□□□□ -0.07
PRKCB-205ENST00000472066 REC8O95072 547 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 TSPY3P0CV98 308 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 TSPY8P0CW00 308 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 CETPP11597 493 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 SREBF2Q12772 1141 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 RRP12Q5JTH9 1297 aaKnown RBP14.59□□□□□ -0.07
PRKCB-205ENST00000472066 JMYQ8N9B5 988 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 BRI3BPQ8WY22 251 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 KANSL2Q9H9L4 492 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 TAF6LQ9Y6J9 622 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 OTOFQ9HC10 1997 aa14.59□□□□□ -0.07
PRKCB-205ENST00000472066 CCL15-CCL14A0A0B4J2E2 113 aa14.58□□□□□ -0.08
PRKCB-205ENST00000472066 IGKV6D-41A0A0C4DH26 115 aa14.58□□□□□ -0.08
PRKCB-205ENST00000472066 A0A0G2JLL6 359 aaPredicted RBP14.58□□□□□ -0.08
PRKCB-205ENST00000472066 TSPY2A6NKD2 308 aa14.58□□□□□ -0.08
PRKCB-205ENST00000472066 USP17L10C9JJH3 530 aa14.58□□□□□ -0.08
PRKCB-205ENST00000472066 SLC27A2O14975 620 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms