RNA–Protein interactions for RNA: ENST00000471739.1

FYCO1-204, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 4

Gene FYCO1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-204ENST00000471739 SIPA1L1O43166 1804 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 C19orf81C9J6K1 198 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 H0YGN5 161 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 GDF11O95390 407 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 MS4A1P11836 297 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 CAPN2P17655 700 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 HOXA7P31268 230 aaPredicted RBP14.9□□□□□ -0.02
FYCO1-204ENST00000471739 IRX3P78415 501 aaPredicted RBP14.9□□□□□ -0.02
FYCO1-204ENST00000471739 MAP3K12Q12852 859 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 HSP90AB4PQ58FF6 505 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 AACSQ86V21 672 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 MAGEB6Q8N7X4 407 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 MIGA1Q8NAN2 632 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 HTATIP2Q9BUP3 242 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 TAOK2Q9UL54 1235 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 ZBTB21Q9ULJ3 1066 aa14.9□□□□□ -0.02
FYCO1-204ENST00000471739 USP17L10C9JJH3 530 aa14.89□□□□□ -0.03
FYCO1-204ENST00000471739 FARP2O94887 1054 aaPredicted RBP14.89□□□□□ -0.03
FYCO1-204ENST00000471739 SGPL1O95470 568 aa14.89□□□□□ -0.03
FYCO1-204ENST00000471739 USP5P45974 858 aa14.89□□□□□ -0.03
FYCO1-204ENST00000471739 SHROOM1Q2M3G4 852 aaPredicted RBP14.89□□□□□ -0.03
FYCO1-204ENST00000471739 DPF3Q92784 378 aa14.89□□□□□ -0.03
FYCO1-204ENST00000471739 MORF4L1Q9UBU8 362 aa14.89□□□□□ -0.03
FYCO1-204ENST00000471739 COLQQ9Y215 455 aaPredicted RBP14.89□□□□□ -0.03
FYCO1-204ENST00000471739 NDUFB9Q9Y6M9 179 aa14.89□□□□□ -0.03
FYCO1-204ENST00000471739 FOCADQ5VW36 1801 aa14.89□□□□□ -0.03
FYCO1-204ENST00000471739 DOCK3Q8IZD9 2030 aa14.88□□□□□ -0.03
FYCO1-204ENST00000471739 EHD4Q9H223 541 aa14.88□□□□□ -0.03
FYCO1-204ENST00000471739 ANTXR1Q9H6X2 564 aa14.88□□□□□ -0.03
FYCO1-204ENST00000471739 PAK6Q9NQU5 681 aaPredicted RBP14.88□□□□□ -0.03
FYCO1-204ENST00000471739 CDK5RAP2Q96SN8 1893 aa14.88□□□□□ -0.03
FYCO1-204ENST00000471739 MYO5AQ9Y4I1 1855 aaKnown RBP14.88□□□□□ -0.03
FYCO1-204ENST00000471739 HMGCRP04035 888 aa14.87□□□□□ -0.03
FYCO1-204ENST00000471739 HERVK_113P62684 666 aa14.87□□□□□ -0.03
FYCO1-204ENST00000471739 RHPN1Q8TCX5 695 aa14.87□□□□□ -0.03
FYCO1-204ENST00000471739 DEFB118Q96PH6 123 aa14.87□□□□□ -0.03
FYCO1-204ENST00000471739 P2RX7Q99572 595 aaKnown RBP14.87□□□□□ -0.03
FYCO1-204ENST00000471739 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
FYCO1-204ENST00000471739 SERPINB13Q9UIV8 391 aa14.87□□□□□ -0.03
FYCO1-204ENST00000471739 GJD2Q9UKL4 321 aa14.87□□□□□ -0.03
FYCO1-204ENST00000471739 HMMRO75330 724 aa14.86□□□□□ -0.03
FYCO1-204ENST00000471739 GH2P01242 217 aa14.86□□□□□ -0.03
FYCO1-204ENST00000471739 TFRCP02786 760 aaKnown RBP14.86□□□□□ -0.03
FYCO1-204ENST00000471739 FXR1P51114 621 aaKnown RBP eCLIP14.86□□□□□ -0.03
FYCO1-204ENST00000471739 TTF1Q15361 905 aaPredicted RBP14.86□□□□□ -0.03
FYCO1-204ENST00000471739 TATDN1Q6P1N9 297 aa14.86□□□□□ -0.03
FYCO1-204ENST00000471739 USP17L2Q6R6M4 530 aa14.86□□□□□ -0.03
FYCO1-204ENST00000471739 TTC6Q86TZ1 520 aa14.86□□□□□ -0.03
FYCO1-204ENST00000471739 RPAP2Q8IXW5 612 aaPredicted RBP14.86□□□□□ -0.03
FYCO1-204ENST00000471739 GPRC5AQ8NFJ5 357 aa14.86□□□□□ -0.03
FYCO1-204ENST00000471739 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
FYCO1-204ENST00000471739 GTF3C2Q8WUA4 911 aaPredicted RBP14.85□□□□□ -0.03
FYCO1-204ENST00000471739 KIF1BPQ96EK5 621 aa14.85□□□□□ -0.03
FYCO1-204ENST00000471739 RIOK1Q9BRS2 568 aaKnown RBP14.85□□□□□ -0.03
FYCO1-204ENST00000471739 CRISPLD2Q9H0B8 497 aa14.85□□□□□ -0.03
FYCO1-204ENST00000471739 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.85□□□□□ -0.03
FYCO1-204ENST00000471739 TXNRD2Q9NNW7 524 aa14.85□□□□□ -0.03
FYCO1-204ENST00000471739 EMILIN3Q9NT22 766 aa14.85□□□□□ -0.03
FYCO1-204ENST00000471739 DDX19BQ9UMR2 479 aa14.85□□□□□ -0.03
FYCO1-204ENST00000471739 NR2E3Q9Y5X4 410 aa14.85□□□□□ -0.03
FYCO1-204ENST00000471739 MAGEB6P1A0A0J9YX57 407 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 PDE6AP16499 860 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 MAPK4P31152 587 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 CERKLQ49MI3 558 aaPredicted RBP14.84□□□□□ -0.03
FYCO1-204ENST00000471739 SLC9C2Q5TAH2 1124 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 CHRDL2Q6WN34 429 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.84□□□□□ -0.03
FYCO1-204ENST00000471739 SOCS4Q8WXH5 440 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 C12orf42Q96LP6 360 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 FEZ1Q99689 392 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 ZBTB40Q9NUA8 1239 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
FYCO1-204ENST00000471739 APBB1O00213 710 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 IFIT2P09913 472 aaKnown RBP14.83□□□□□ -0.04
FYCO1-204ENST00000471739 USP14P54578 494 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 ERVK-9P63128 1117 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 ERVK-24P63145 666 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 PDE3AQ14432 1141 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 RAB3GAP1Q15042 981 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 ABCB5Q2M3G0 1257 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 NUDT12Q9BQG2 462 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 CRNKL1Q9BZJ0 848 aaKnown RBP14.83□□□□□ -0.04
FYCO1-204ENST00000471739 KIAA1683Q9H0B3 1180 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 MYH1P12882 1939 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 RPTORQ8N122 1335 aa14.83□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L15C9J2P7 530 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L13C9JLJ4 530 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L11C9JVI0 530 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L18D6R9N7 530 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L22D6RA61 530 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L17D6RBQ6 530 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L19D6RCP7 530 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L20D6RJB6 530 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 GOLIM4O00461 696 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 PEX10O60683 326 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 RAB11FIP3O75154 756 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 XRCC5P13010 732 aaKnown RBP14.82□□□□□ -0.04
FYCO1-204ENST00000471739 SHMT1P34896 483 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 PLCD1P51178 756 aa14.82□□□□□ -0.04
FYCO1-204ENST00000471739 USP17L24Q0WX57 530 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms