RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 RPS6KA4O75676 772 aa23.1■■□□□ 1.29
CDHR3-207ENST00000470188 KLRK1P26718 216 aa23.1■■□□□ 1.29
CDHR3-207ENST00000470188 PPP2R5BQ15173 497 aa23.1■■□□□ 1.29
CDHR3-207ENST00000470188 PTPN14Q15678 1187 aa23.1■■□□□ 1.29
CDHR3-207ENST00000470188 FNBP4Q8N3X1 1017 aaPredicted RBP23.1■■□□□ 1.29
CDHR3-207ENST00000470188 ZSCAN10Q96SZ4 725 aaPredicted RBP23.1■■□□□ 1.29
CDHR3-207ENST00000470188 TUBE1Q9UJT0 475 aa23.1■■□□□ 1.29
CDHR3-207ENST00000470188 CYP2D7A0A087X1C5 515 aa23.09■■□□□ 1.29
CDHR3-207ENST00000470188 TOB1P50616 345 aaPredicted RBP23.09■■□□□ 1.29
CDHR3-207ENST00000470188 TPM4P67936 248 aa23.09■■□□□ 1.29
CDHR3-207ENST00000470188 RILPL1Q5EBL4 403 aa23.09■■□□□ 1.29
CDHR3-207ENST00000470188 ENAHQ8N8S7 591 aaPredicted RBP23.09■■□□□ 1.29
CDHR3-207ENST00000470188 KIF2AO00139 706 aaPredicted RBP23.08■■□□□ 1.29
CDHR3-207ENST00000470188 ZPR1O75312 459 aa23.08■■□□□ 1.29
CDHR3-207ENST00000470188 FILIP1Q7Z7B0 1213 aa23.08■■□□□ 1.29
CDHR3-207ENST00000470188 KRT222Q8N1A0 295 aa23.08■■□□□ 1.29
CDHR3-207ENST00000470188 KCNH3Q9ULD8 1083 aa23.08■■□□□ 1.29
CDHR3-207ENST00000470188 DUOX1Q9NRD9 1551 aa23.08■■□□□ 1.29
CDHR3-207ENST00000470188 GNPATO15228 680 aa23.08■■□□□ 1.29
CDHR3-207ENST00000470188 PCP11498 1178 aaKnown RBP23.08■■□□□ 1.29
CDHR3-207ENST00000470188 NSUN4Q96CB9 384 aaKnown RBP23.08■■□□□ 1.29
CDHR3-207ENST00000470188 ERO1AQ96HE7 468 aa23.08■■□□□ 1.29
CDHR3-207ENST00000470188 RNF26Q9BY78 433 aaPredicted RBP23.08■■□□□ 1.29
CDHR3-207ENST00000470188 ANKRD2Q9GZV1 360 aa23.08■■□□□ 1.29
CDHR3-207ENST00000470188 HIBADHP31937 336 aaKnown RBP23.07■■□□□ 1.28
CDHR3-207ENST00000470188 ARID5BQ14865 1188 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 PDS5AQ29RF7 1337 aaKnown RBP23.07■■□□□ 1.28
CDHR3-207ENST00000470188 SLFN14P0C7P3 912 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 SKILP12757 684 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 AKAP17AQ02040 695 aaKnown RBP23.07■■□□□ 1.28
CDHR3-207ENST00000470188 MECOMQ03112 1051 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 NR5A1Q13285 461 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 PNOCQ13519 176 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 IFIT1BQ5T764 474 aaKnown RBP23.07■■□□□ 1.28
CDHR3-207ENST00000470188 ISM2Q6H9L7 571 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 CTR9Q6PD62 1173 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 IQCA1Q86XH1 822 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 ZNF592Q92610 1267 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 TFCP2L1Q9NZI6 479 aa23.07■■□□□ 1.28
CDHR3-207ENST00000470188 PRDM1O75626 825 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 FAM193AP78312 1265 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 NAA30Q147X3 362 aaPredicted RBP23.06■■□□□ 1.28
CDHR3-207ENST00000470188 TPTE2Q6XPS3 522 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 CATIPQ7Z7H3 387 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 CNNM3Q8NE01 707 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 FGRP09769 529 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 NCAPHQ15003 741 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 LONRF3Q496Y0 759 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 KRBA2Q6ZNG9 492 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 FAM53CQ9NYF3 392 aa23.06■■□□□ 1.28
CDHR3-207ENST00000470188 USP17L12C9JPN9 530 aa23.05■■□□□ 1.28
CDHR3-207ENST00000470188 USP17L21D6R901 530 aa23.05■■□□□ 1.28
CDHR3-207ENST00000470188 IKBKBO14920 756 aa23.05■■□□□ 1.28
CDHR3-207ENST00000470188 IGSF3O75054 1194 aa23.05■■□□□ 1.28
CDHR3-207ENST00000470188 SMC2O95347 1197 aa23.05■■□□□ 1.28
CDHR3-207ENST00000470188 METTL16Q86W50 562 aaKnown RBP23.05■■□□□ 1.28
CDHR3-207ENST00000470188 CCDC24Q8N4L8 307 aa23.05■■□□□ 1.28
CDHR3-207ENST00000470188 FBXO2Q9UK22 296 aaPredicted RBP23.05■■□□□ 1.28
CDHR3-207ENST00000470188 XBP1P17861 261 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 PTPREP23469 700 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 GSDMDP57764 484 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 OXER1Q8TDS5 423 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 XPO4Q9C0E2 1151 aaKnown RBP23.04■■□□□ 1.28
CDHR3-207ENST00000470188 IFNKQ9P0W0 207 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 ZNF215Q9UL58 517 aaPredicted RBP23.04■■□□□ 1.28
CDHR3-207ENST00000470188 COL24A1Q17RW2 1714 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 BAZ2AQ9UIF9 1905 aaKnown RBP23.04■■□□□ 1.28
CDHR3-207ENST00000470188 SPECC1Q5M775 1068 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 CRNKL1Q9BZJ0 848 aaKnown RBP23.04■■□□□ 1.28
CDHR3-207ENST00000470188 AATFQ9NY61 560 aaKnown RBP eCLIP23.04■■□□□ 1.28
CDHR3-207ENST00000470188 IMPACTQ9P2X3 320 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 CCNL1Q9UK58 526 aaPredicted RBP23.04■■□□□ 1.28
CDHR3-207ENST00000470188 RTCBQ9Y3I0 505 aaKnown RBP23.04■■□□□ 1.28
CDHR3-207ENST00000470188 PCDHB6Q9Y5E3 794 aa23.04■■□□□ 1.28
CDHR3-207ENST00000470188 CCZ1BP86790 482 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 CCZ1P86791 482 aaPredicted RBP23.03■■□□□ 1.28
CDHR3-207ENST00000470188 TERF2Q15554 542 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 KMT5BQ4FZB7 885 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 RBM28Q9NW13 759 aaKnown RBP23.03■■□□□ 1.28
CDHR3-207ENST00000470188 USP21Q9UK80 565 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 CEP131Q9UPN4 1083 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 CALM1P0DP23 149 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 CALM2P0DP24 149 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 CALM3P0DP25 149 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 CCAR2Q8N163 923 aaKnown RBP23.03■■□□□ 1.28
CDHR3-207ENST00000470188 OSBPL5Q9H0X9 879 aaPredicted RBP23.03■■□□□ 1.28
CDHR3-207ENST00000470188 CABP5Q9NP86 173 aa23.03■■□□□ 1.28
CDHR3-207ENST00000470188 USP27XA6NNY8 438 aa23.02■■□□□ 1.28
CDHR3-207ENST00000470188 PRDX5P30044 214 aa23.02■■□□□ 1.28
CDHR3-207ENST00000470188 FUT2Q10981 343 aa23.02■■□□□ 1.28
CDHR3-207ENST00000470188 MEX3CQ5U5Q3 659 aaKnown RBP23.02■■□□□ 1.28
CDHR3-207ENST00000470188 CREBRFQ8IUR6 639 aa23.02■■□□□ 1.28
CDHR3-207ENST00000470188 ELOA2Q8IYF1 753 aaPredicted RBP23.02■■□□□ 1.28
CDHR3-207ENST00000470188 DCP1AQ9NPI6 582 aaPredicted RBP23.02■■□□□ 1.28
CDHR3-207ENST00000470188 VPS54Q9P1Q0 977 aa23.02■■□□□ 1.28
CDHR3-207ENST00000470188 HOOK1Q9UJC3 728 aaKnown RBP23.02■■□□□ 1.28
CDHR3-207ENST00000470188 MYH2Q9UKX2 1941 aa23.02■■□□□ 1.28
CDHR3-207ENST00000470188 PRPF3O43395 683 aaKnown RBP23.01■■□□□ 1.27
CDHR3-207ENST00000470188 SLU7O95391 586 aaKnown RBP23.01■■□□□ 1.27
CDHR3-207ENST00000470188 GRIN1Q05586 938 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms