RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 SENP6Q9GZR1 1112 aaPredicted RBP10.41□□□□□ -0.74
LSM2-210ENST00000470086 PORCNQ9H237 461 aa10.41□□□□□ -0.74
LSM2-210ENST00000470086 MYH1P12882 1939 aa10.41□□□□□ -0.74
LSM2-210ENST00000470086 SYNGAP1Q96PV0 1343 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 TRIM43BA6NCK2 446 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 APAF1O14727 1248 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 CAPN2P17655 700 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 RGS3P49796 1198 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 HMGCS2P54868 508 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 GNAI1P63096 354 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 BEND3Q5T5X7 828 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 FASTKD5Q7L8L6 764 aaKnown RBP10.4□□□□□ -0.74
LSM2-210ENST00000470086 TRPV1Q8NER1 839 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 TRIM43Q96BQ3 446 aaPredicted RBP10.4□□□□□ -0.74
LSM2-210ENST00000470086 ASCC2Q9H1I8 757 aaPredicted RBP10.4□□□□□ -0.74
LSM2-210ENST00000470086 PDLIM7Q9NR12 457 aa10.4□□□□□ -0.74
LSM2-210ENST00000470086 JAG1P78504 1218 aa10.39□□□□□ -0.75
LSM2-210ENST00000470086 SMAD3P84022 425 aaKnown RBP10.39□□□□□ -0.75
LSM2-210ENST00000470086 FKBP5Q13451 457 aaPredicted RBP10.39□□□□□ -0.75
LSM2-210ENST00000470086 PPM1EQ8WY54 764 aa10.39□□□□□ -0.75
LSM2-210ENST00000470086 KHSRPQ92945 711 aaKnown RBP eCLIP10.39□□□□□ -0.75
LSM2-210ENST00000470086 HOOK2Q96ED9 719 aa10.39□□□□□ -0.75
LSM2-210ENST00000470086 MYH16Q9H6N6 1097 aa10.39□□□□□ -0.75
LSM2-210ENST00000470086 MORF4L1Q9UBU8 362 aa10.39□□□□□ -0.75
LSM2-210ENST00000470086 ATP11BQ9Y2G3 1177 aa10.39□□□□□ -0.75
LSM2-210ENST00000470086 MUC6Q6W4X9 2439 aa10.39□□□□□ -0.75
LSM2-210ENST00000470086 FGFR2P21802 821 aa10.38□□□□□ -0.75
LSM2-210ENST00000470086 MAP3K10Q02779 954 aa10.38□□□□□ -0.75
LSM2-210ENST00000470086 ADGRE1Q14246 886 aa10.38□□□□□ -0.75
LSM2-210ENST00000470086 TWISTNBQ3B726 338 aaPredicted RBP10.38□□□□□ -0.75
LSM2-210ENST00000470086 Q3C1V9 767 aa10.38□□□□□ -0.75
LSM2-210ENST00000470086 TRIM60Q495X7 471 aa10.38□□□□□ -0.75
LSM2-210ENST00000470086 TAF7LQ5H9L4 462 aa10.38□□□□□ -0.75
LSM2-210ENST00000470086 TBC1D22AQ8WUA7 517 aa10.38□□□□□ -0.75
LSM2-210ENST00000470086 UHRF1Q96T88 793 aaPredicted RBP10.38□□□□□ -0.75
LSM2-210ENST00000470086 C11orf16Q9NQ32 467 aa10.38□□□□□ -0.75
LSM2-210ENST00000470086 PRDM5Q9NQX1 630 aaPredicted RBP10.38□□□□□ -0.75
LSM2-210ENST00000470086 MCM3APO60318 1980 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 MAST3O60307 1309 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 ZKSCAN1P17029 563 aaPredicted RBP10.37□□□□□ -0.75
LSM2-210ENST00000470086 DNAJB2P25686 324 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 PBX2P40425 430 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 CCDC57Q2TAC2 916 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 MORN1Q5T089 497 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 ANO1Q5XXA6 986 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 ANKRD44Q8N8A2 993 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 PROCA1Q8NCQ7 364 aaPredicted RBP10.37□□□□□ -0.75
LSM2-210ENST00000470086 ZNF384Q8TF68 577 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 LBHD1Q9BQE6 289 aaPredicted RBP10.37□□□□□ -0.75
LSM2-210ENST00000470086 MRIQ9BWK5 157 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 PICK1Q9NRD5 415 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 USP40Q9NVE5 1235 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 NDUFB9Q9Y6M9 179 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 MYH8P13535 1937 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 ATG2AQ2TAZ0 1938 aa10.37□□□□□ -0.75
LSM2-210ENST00000470086 MYBBP1AQ9BQG0 1328 aaKnown RBP10.36□□□□□ -0.75
LSM2-210ENST00000470086 GRM8O00222 908 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 CNMDO75829 334 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 SPP2Q13103 211 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 PICALMQ13492 652 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 GJC2Q5T442 439 aaPredicted RBP10.36□□□□□ -0.75
LSM2-210ENST00000470086 GPR142Q7Z601 462 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 ASB2Q96Q27 587 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 STK31Q9BXU1 1019 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 RYDENQ9NUL5 291 aaKnown RBP10.36□□□□□ -0.75
LSM2-210ENST00000470086 THEGQ9P2T0 379 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 MYO15AQ9UKN7 3530 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 SCN5AQ14524 2016 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 NAV1Q8NEY1 1877 aa10.36□□□□□ -0.75
LSM2-210ENST00000470086 GAKO14976 1311 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
LSM2-210ENST00000470086 PPP1R37O75864 691 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 NBPF7P0C2Y1 421 aaPredicted RBP10.35□□□□□ -0.75
LSM2-210ENST00000470086 TFF2Q03403 129 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 SNX17Q15036 470 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 METTL24Q5JXM2 366 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 VPS37DQ86XT2 251 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 NPLOC4Q8TAT6 608 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 P2RX7Q99572 595 aaKnown RBP10.35□□□□□ -0.75
LSM2-210ENST00000470086 APBA2Q99767 749 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 LRFN3Q9BTN0 628 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 IDI2Q9BXS1 227 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 PRDM12Q9H4Q4 367 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 BICC1Q9H694 974 aaKnown RBP10.35□□□□□ -0.75
LSM2-210ENST00000470086 EPHX3Q9H6B9 360 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 RBPJLQ9UBG7 517 aa10.35□□□□□ -0.75
LSM2-210ENST00000470086 MROH5Q6ZUA9 1318 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 C5orf42Q9H799 3197 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 PDE8BO95263 885 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 IGHA2P01877 340 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 XRCC5P13010 732 aaKnown RBP10.34□□□□□ -0.75
LSM2-210ENST00000470086 GCLCP48506 637 aaPredicted RBP10.34□□□□□ -0.75
LSM2-210ENST00000470086 KCNQ1P51787 676 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 HERVK_113P62684 666 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 MTMR2Q13614 643 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 CCDC85BQ15834 202 aaPredicted RBP10.34□□□□□ -0.75
LSM2-210ENST00000470086 LCE2DQ5TA82 110 aaPredicted RBP10.34□□□□□ -0.75
LSM2-210ENST00000470086 TMEM92Q6UXU6 159 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 RNPC3Q96LT9 517 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms