RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CENPHQ9H3R5 247 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 CPS1P31327 1500 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 HSF2BPO75031 334 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 PECAM1P16284 738 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 ERCC5P28715 1186 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 TNFRSF8P28908 595 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 LSP1P33241 339 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 EPHB4P54760 987 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 PNOCQ13519 176 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 RESP18Q5W5W9 173 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 CYP26C1Q6V0L0 522 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 ZNF662Q6ZS27 426 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 ZNF589Q86UQ0 364 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 NME9Q86XW9 330 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 FBXL16Q8N461 479 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 PAIP2Q9BPZ3 127 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 HAUS4Q9H6D7 363 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 SAR1BQ9Y6B6 198 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 RIMS1Q86UR5 1692 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 FAM107AO95990 144 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 ATP2B2Q01814 1243 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 RBL2Q08999 1139 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 PDCLQ13371 301 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 PTGISQ16647 500 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 NT5DC1Q5TFE4 455 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 METTL16Q86W50 562 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 OR8K1Q8NGG5 319 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 CCHCR1Q8TD31 782 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 C8orf76Q96K31 380 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 PSMD1Q99460 953 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 TPX2Q9ULW0 747 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 ZMYM6O95789 1325 aa10.15□□□□□ -0.78
SMARCE1-207ENST00000469334 ANO9A1A5B4 782 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 PPP1R37O75864 691 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 RPS6KA3P51812 740 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 EXOSC10Q01780 885 aaKnown RBP10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 XRCC4Q13426 336 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 RRS1Q15050 365 aaKnown RBP10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 SLC5A9Q2M3M2 681 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 ZC3H12AQ5D1E8 599 aaKnown RBP10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 CRELD2Q6UXH1 353 aaPredicted RBP10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 ARMC9Q7Z3E5 817 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 FAM228AQ86W67 206 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 MMGT1Q8N4V1 131 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 MYCBPAPQ8TBZ2 947 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 CAVIN3Q969G5 261 aa10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.15□□□□□ -0.79
SMARCE1-207ENST00000469334 C4AP0C0L4 1744 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 C4BP0C0L5 1744 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 MGRN1O60291 552 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 PPFIA3O75145 1194 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 PDHBP11177 359 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 PLCD1P51178 756 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 GUCY1B3Q02153 619 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 PDE4BQ07343 736 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 LACTB2Q53H82 288 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 TTMPQ5BVD1 217 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 SND1Q7KZF4 910 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 ZNF572Q7Z3I7 529 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 NLRP14Q86W24 1093 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 MMS19Q96T76 1030 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 EBF2Q9HAK2 575 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 KIF9Q9HAQ2 790 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 MIS18AQ9NYP9 233 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 PCDHA5Q9Y5H7 936 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 WDR17Q8IZU2 1322 aa10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 PARP4Q9UKK3 1724 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-207ENST00000469334 AHCYL1O43865 530 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 DNAJC8O75937 253 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 TFRCP02786 760 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 CYP21A2P08686 494 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 GHRP10912 638 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 PDIA3P30101 505 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 PTPN21Q16825 1174 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 PPP4R3AQ6IN85 833 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 CD302Q8IX05 232 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 ACRBPQ8NEB7 543 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 LMBR1Q8WVP7 490 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 SPDL1Q96EA4 605 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 SCLT1Q96NL6 688 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 MAN1B1Q9UKM7 699 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 DIP2AQ14689 1571 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 KDRP35968 1356 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 MYO5AQ9Y4I1 1855 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 A0A0U1RQJ8 604 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 FDPSP14324 419 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 MORC3Q14149 939 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 BEND3Q5T5X7 828 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 SHC4Q6S5L8 630 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 ARFGAP2Q8N6H7 521 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 RASSF8Q8NHQ8 419 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 ATRIPQ8WXE1 791 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 CCT8L2Q96SF2 557 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 OSBPL9Q96SU4 736 aa10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 CORO1CQ9ULV4 474 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-207ENST00000469334 ECM29Q5VYK3 1845 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 ERICH2A1L162 156 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 FESP07332 822 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms