RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 TOPBP1Q92547 1522 aa6.34□□□□□ -1.39
SMG5-202ENST00000468993 MAGI1Q96QZ7 1491 aaPredicted RBP6.34□□□□□ -1.4
SMG5-202ENST00000468993 PRR36Q9H6K5 1346 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 TRBV23-1A0A0A0MS06 115 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 TRAV20A0A0B4J274 112 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 NFKBIEO00221 500 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 ABLIM3O94929 683 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 ALDH1A1P00352 501 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 TRIM27P14373 513 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 PDE6BP35913 854 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 DGKGP49619 791 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 MLECQ14165 292 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 INO80DQ53TQ3 878 aaPredicted RBP6.33□□□□□ -1.4
SMG5-202ENST00000468993 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
SMG5-202ENST00000468993 COL13A1Q5TAT6 717 aaPredicted RBP6.33□□□□□ -1.4
SMG5-202ENST00000468993 KIAA1211LQ6NV74 962 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 UNC5AQ6ZN44 842 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 KRT25Q7Z3Z0 450 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 SULF2Q8IWU5 870 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 SPICE1Q8N0Z3 855 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 MEIOBQ8N635 442 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 ARHGEF4Q9NR80 690 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 TLR7Q9NYK1 1049 aaKnown RBP6.33□□□□□ -1.4
SMG5-202ENST00000468993 TAGLN3Q9UI15 199 aa6.33□□□□□ -1.4
SMG5-202ENST00000468993 TSPOAP1O95153 1857 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 LTBP3Q9NS15 1303 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 FAM83GA6ND36 823 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 NPHP1O15259 732 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 TRPA1O75762 1119 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 ZNF143P52747 638 aaPredicted RBP6.32□□□□□ -1.4
SMG5-202ENST00000468993 WDR4P57081 412 aaKnown RBP6.32□□□□□ -1.4
SMG5-202ENST00000468993 POU4F2Q12837 409 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 SETDB1Q15047 1291 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 ZYXQ15942 572 aaKnown RBP6.32□□□□□ -1.4
SMG5-202ENST00000468993 FAM209AQ5JX71 171 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 WDR78Q5VTH9 848 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 KRBA2Q6ZNG9 492 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 LHFPL2Q6ZUX7 228 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 SCUBE1Q8IWY4 988 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 AMOTL1Q8IY63 956 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 ASAP3Q8TDY4 903 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 JPH3Q8WXH2 748 aaPredicted RBP6.32□□□□□ -1.4
SMG5-202ENST00000468993 HHIPQ96QV1 700 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 INSM2Q96T92 566 aaPredicted RBP6.32□□□□□ -1.4
SMG5-202ENST00000468993 RHOBTB2Q9BYZ6 727 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 GSX2Q9BZM3 304 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 ZCCHC2Q9C0B9 1178 aaKnown RBP6.32□□□□□ -1.4
SMG5-202ENST00000468993 CCDC8Q9H0W5 538 aaPredicted RBP6.32□□□□□ -1.4
SMG5-202ENST00000468993 CRISPLD1Q9H336 500 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 PRDM11Q9NQV5 511 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 OBP2AQ9NY56 170 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 GMIPQ9P107 970 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 TRHDEQ9UKU6 1024 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 RPS6KL1Q9Y6S9 549 aa6.32□□□□□ -1.4
SMG5-202ENST00000468993 A0A1W2PQU0 124 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 PDE2AO00408 941 aaPredicted RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 GABRDO14764 452 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 TBX3O15119 743 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 SPINT1O43278 529 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 PRPF3O43395 683 aaKnown RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 HTR3BO95264 441 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 B3GALT4O96024 378 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 NBPF7P0C2Y1 421 aaPredicted RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 ACRP10323 421 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 NAT2P11245 290 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 TIMP2P16035 220 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 ZSCAN20P17040 1043 aaPredicted RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 ARNTP27540 789 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 ZNF157P51786 506 aaPredicted RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 PTPN5P54829 565 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 SUMO1P63165 101 aaKnown RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 SLC7A5Q01650 507 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 PLAURQ03405 335 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 LMOD3Q0VAK6 560 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 PICALMQ13492 652 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 TRIM61Q5EBN2 209 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 SYDE2Q5VT97 1194 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 PKN3Q6P5Z2 889 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 SLC7A3Q8WY07 619 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 KLHL6Q8WZ60 621 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 AARSD1Q9BTE6 412 aaKnown RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 CLEC4MQ9H2X3 399 aaPredicted RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 POLMQ9NP87 494 aaPredicted RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 TIMMDC1Q9NPL8 285 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 LUC7LQ9NQ29 371 aaKnown RBP6.31□□□□□ -1.4
SMG5-202ENST00000468993 ZFATQ9P243 1243 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 USP25Q9UHP3 1055 aa6.31□□□□□ -1.4
SMG5-202ENST00000468993 IQSEC2Q5JU85 1478 aa6.3□□□□□ -1.4
SMG5-202ENST00000468993 VSTM5A8MXK1 200 aa6.3□□□□□ -1.4
SMG5-202ENST00000468993 TNFRSF10CO14798 259 aa6.3□□□□□ -1.4
SMG5-202ENST00000468993 MAP3K6O95382 1288 aa6.3□□□□□ -1.4
SMG5-202ENST00000468993 HSP90AA1P07900 732 aaKnown RBP6.3□□□□□ -1.4
SMG5-202ENST00000468993 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
SMG5-202ENST00000468993 HTR3AP46098 478 aa6.3□□□□□ -1.4
SMG5-202ENST00000468993 HSP90AA2PQ14568 343 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms