RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 HOXD10P28358 340 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 LACTBP83111 547 aaPredicted RBP17.6■□□□□ 0.41
COMMD3-206ENST00000468179 TATDN1Q6P1N9 297 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 LCORLQ8N3X6 602 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 KBTBD3Q8NAB2 608 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 DNAJC18Q9H819 358 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 TMOD4Q9NZQ9 345 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 PTPN22Q9Y2R2 807 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 MBD4O95243 580 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 PRMT2P55345 433 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
COMMD3-206ENST00000468179 SLC4A8Q2Y0W8 1093 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 CERKLQ49MI3 558 aaPredicted RBP17.59■□□□□ 0.41
COMMD3-206ENST00000468179 SH3D19Q5HYK7 790 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
COMMD3-206ENST00000468179 ARMT1Q9H993 441 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 DCP1AQ9NPI6 582 aaPredicted RBP17.59■□□□□ 0.41
COMMD3-206ENST00000468179 CPA4Q9UI42 421 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 ZBTB21Q9ULJ3 1066 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 DOCK1Q14185 1865 aa17.59■□□□□ 0.41
COMMD3-206ENST00000468179 MYO5AQ9Y4I1 1855 aaKnown RBP17.58■□□□□ 0.41
COMMD3-206ENST00000468179 GDF11O95390 407 aa17.58■□□□□ 0.4
COMMD3-206ENST00000468179 MX1P20591 662 aa17.58■□□□□ 0.4
COMMD3-206ENST00000468179 OSBPP22059 807 aa17.58■□□□□ 0.4
COMMD3-206ENST00000468179 BACE1P56817 501 aa17.58■□□□□ 0.4
COMMD3-206ENST00000468179 CCDC84Q86UT8 332 aaPredicted RBP17.58■□□□□ 0.4
COMMD3-206ENST00000468179 SWAP70Q9UH65 585 aa17.58■□□□□ 0.4
COMMD3-206ENST00000468179 USP17L10C9JJH3 530 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 CYP2C8P10632 490 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 RGS19P49795 217 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 PLCD1P51178 756 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 HMGCS2P54868 508 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 ABCB5Q2M3G0 1257 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 NBPF11Q86T75 865 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 SDR42E1Q8WUS8 393 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.57■□□□□ 0.4
COMMD3-206ENST00000468179 FOCADQ5VW36 1801 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 ADGRA2Q96PE1 1338 aa17.57■□□□□ 0.4
COMMD3-206ENST00000468179 RNF113AO15541 343 aaKnown RBP17.56■□□□□ 0.4
COMMD3-206ENST00000468179 GH2P01242 217 aa17.56■□□□□ 0.4
COMMD3-206ENST00000468179 APPBP2Q92624 585 aa17.56■□□□□ 0.4
COMMD3-206ENST00000468179 SLC4A4Q9Y6R1 1079 aa17.56■□□□□ 0.4
COMMD3-206ENST00000468179 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
COMMD3-206ENST00000468179 GNAT2P19087 354 aa17.55■□□□□ 0.4
COMMD3-206ENST00000468179 PSMC4P43686 418 aa17.55■□□□□ 0.4
COMMD3-206ENST00000468179 GCLCP48506 637 aaPredicted RBP17.55■□□□□ 0.4
COMMD3-206ENST00000468179 FCGRTP55899 365 aa17.55■□□□□ 0.4
COMMD3-206ENST00000468179 GABPAQ06546 454 aa17.55■□□□□ 0.4
COMMD3-206ENST00000468179 MTMR2Q13614 643 aa17.55■□□□□ 0.4
COMMD3-206ENST00000468179 TSHZ3Q63HK5 1081 aa17.55■□□□□ 0.4
COMMD3-206ENST00000468179 PRKAB2O43741 272 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 BCRP11274 1271 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 USP14P54578 494 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
COMMD3-206ENST00000468179 RAB3GAP1Q15042 981 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 TREML2Q5T2D2 321 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 GIMAP6Q6P9H5 292 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 USP17L2Q6R6M4 530 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 PI4K2BQ8TCG2 481 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 FEZ1Q99689 392 aa17.54■□□□□ 0.4
COMMD3-206ENST00000468179 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
COMMD3-206ENST00000468179 SUPT16HQ9Y5B9 1047 aaKnown RBP17.54■□□□□ 0.4
COMMD3-206ENST00000468179 HOXA7P31268 230 aaPredicted RBP17.53■□□□□ 0.4
COMMD3-206ENST00000468179 SHMT1P34896 483 aa17.53■□□□□ 0.4
COMMD3-206ENST00000468179 JAG1P78504 1218 aa17.53■□□□□ 0.4
COMMD3-206ENST00000468179 MLLT1Q03111 559 aaPredicted RBP17.53■□□□□ 0.4
COMMD3-206ENST00000468179 PIP4P2Q8N4L2 257 aa17.53■□□□□ 0.4
COMMD3-206ENST00000468179 CCDC17Q96LX7 622 aa17.53■□□□□ 0.4
COMMD3-206ENST00000468179 STRBPQ96SI9 672 aaKnown RBP17.53■□□□□ 0.4
COMMD3-206ENST00000468179 FSD1Q9BTV5 496 aa17.53■□□□□ 0.4
COMMD3-206ENST00000468179 CDK5RAP2Q96SN8 1893 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 USP17L12C9JPN9 530 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 USP17L21D6R901 530 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 MPHOSPH10O00566 681 aaKnown RBP17.52■□□□□ 0.4
COMMD3-206ENST00000468179 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 SLC9C1Q4G0N8 1177 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 C12orf60Q5U649 245 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 EXOC6Q8TAG9 804 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 GTF3C2Q8WUA4 911 aaPredicted RBP17.52■□□□□ 0.4
COMMD3-206ENST00000468179 ASCC2Q9H1I8 757 aaPredicted RBP17.52■□□□□ 0.4
COMMD3-206ENST00000468179 ARPP21Q9UBL0 812 aaPredicted RBP17.52■□□□□ 0.4
COMMD3-206ENST00000468179 STAP2Q9UGK3 403 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 SRRDQ9UH36 339 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 MYH1P12882 1939 aa17.52■□□□□ 0.4
COMMD3-206ENST00000468179 SOX10P56693 466 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 FAM110CQ1W6H9 321 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 TMEM179Q6ZVK1 233 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 TICAM2Q86XR7 235 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
COMMD3-206ENST00000468179 ARMC5Q96C12 935 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 TRIM47Q96LD4 638 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 ARHGAP39Q9C0H5 1083 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 KIAA1683Q9H0B3 1180 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 SIPA1L1O43166 1804 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 PHIPQ8WWQ0 1821 aa17.51■□□□□ 0.39
COMMD3-206ENST00000468179 SMC5Q8IY18 1101 aa17.5■□□□□ 0.39
COMMD3-206ENST00000468179 ANKRD13CQ8N6S4 541 aa17.5■□□□□ 0.39
COMMD3-206ENST00000468179 RAET1EQ8TD07 263 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms