RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TSPY8P0CW00 308 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■□□□□ 8.1
MSH5-213ENST00000468136 KIF23Q02241 960 aaPredicted RBP11.81□□□□□ -0.52
MSH5-213ENST00000468136 TROAPQ12815 778 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 NEDD1Q8NHV4 660 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 EHD4Q9H223 541 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 FOXP1Q9H334 677 aaPredicted RBP11.81□□□□□ -0.52
MSH5-213ENST00000468136 KAT14Q9H8E8 782 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 JAG2Q9Y219 1238 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 PLIN4Q96Q06 1357 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 SNED1Q8TER0 1413 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 A0A1W2PQ27 194 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 A0A1W2PQ64 194 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 A0A1W2PQD8 194 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 CTAGE5O15320 804 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 ECE2O60344 883 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 BMP15O95972 392 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
MSH5-213ENST00000468136 TFAP4Q01664 338 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 GNL2Q13823 731 aaKnown RBP11.8□□□□□ -0.52
MSH5-213ENST00000468136 MYSM1Q5VVJ2 828 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 KRT40Q6A162 431 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 MAPKAPK5Q8IW41 473 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 NUP133Q8WUM0 1156 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 CCDC17Q96LX7 622 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 GRPEL1Q9HAV7 217 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 INCENPQ9NQS7 918 aa11.8□□□□□ -0.52
MSH5-213ENST00000468136 DLEC1Q9Y238 1755 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 NAV1Q8NEY1 1877 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 CAVIN2O95810 425 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 CRKP46108 304 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 NOVP48745 357 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 CDK8P49336 464 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 GRIK5Q16478 980 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 FOXD4L6Q3SYB3 417 aaPredicted RBP11.79□□□□□ -0.52
MSH5-213ENST00000468136 DACT2Q5SW24 774 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 GALNT17Q6IS24 598 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 FOXD4L3Q6VB84 417 aaPredicted RBP11.79□□□□□ -0.52
MSH5-213ENST00000468136 TMTC3Q6ZXV5 915 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 NBPF11Q86T75 865 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 ZKSCAN3Q9BRR0 538 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 IDI2Q9BXS1 227 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 USP40Q9NVE5 1235 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 TMEM63CQ9P1W3 806 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 HDAC9Q9UKV0 1011 aa11.79□□□□□ -0.52
MSH5-213ENST00000468136 BAZ2AQ9UIF9 1905 aaKnown RBP11.79□□□□□ -0.52
MSH5-213ENST00000468136 TCHHQ07283 1943 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 COL2A1P02458 1487 aaPredicted RBP11.78□□□□□ -0.52
MSH5-213ENST00000468136 PPIP5K2O43314 1243 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 PPP6R2O75170 966 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 GADD45BO75293 160 aaPredicted RBP11.78□□□□□ -0.52
MSH5-213ENST00000468136 PRDM1O75626 825 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 MMP1P03956 469 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 CYP2D6P10635 497 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 TOP1P11387 765 aaKnown RBP11.78□□□□□ -0.52
MSH5-213ENST00000468136 RASA1P20936 1047 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 CALML3P27482 149 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 CHRNA5P30532 468 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 GABPAQ06546 454 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 SF3A1Q15459 793 aaKnown RBP11.78□□□□□ -0.52
MSH5-213ENST00000468136 RILPL1Q5EBL4 403 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 ADALQ6DHV7 355 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 DEFB132Q7Z7B7 95 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 SENP2Q9HC62 589 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 PIM2Q9P1W9 311 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
MSH5-213ENST00000468136 SLX4Q8IY92 1834 aa11.77□□□□□ -0.52
MSH5-213ENST00000468136 hCG_1984214I3L0E3 225 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 ENTPD3O75355 529 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 WDHD1O75717 1129 aaPredicted RBP11.77□□□□□ -0.53
MSH5-213ENST00000468136 FUT2Q10981 343 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 GRM4Q14833 912 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 STK38Q15208 465 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 UVSSAQ2YD98 709 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 ANO1Q5XXA6 986 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 APOBEC3HQ6NTF7 200 aaKnown RBP11.77□□□□□ -0.53
MSH5-213ENST00000468136 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 FOXP4Q8IVH2 680 aaPredicted RBP11.77□□□□□ -0.53
MSH5-213ENST00000468136 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
MSH5-213ENST00000468136 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 PNMA1Q8ND90 353 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 BICD2Q8TD16 824 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 PHKBQ93100 1093 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.53
MSH5-213ENST00000468136 TSPY26PQ9H489 355 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 DBNDD1Q9H9R9 158 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
MSH5-213ENST00000468136 TFIP11Q9UBB9 837 aaKnown RBP11.77□□□□□ -0.53
MSH5-213ENST00000468136 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.53
MSH5-213ENST00000468136 DDX60LQ5H9U9 1706 aaKnown RBP11.77□□□□□ -0.53
MSH5-213ENST00000468136 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms