RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.2
SSBP1-206ENST00000467681 CHMLP26374 656 aa16.27■□□□□ 0.2
SSBP1-206ENST00000467681 TDO2P48775 406 aa16.27■□□□□ 0.2
SSBP1-206ENST00000467681 CDK8P49336 464 aa16.27■□□□□ 0.2
SSBP1-206ENST00000467681 VPS53Q5VIR6 699 aa16.27■□□□□ 0.2
SSBP1-206ENST00000467681 ZNF589Q86UQ0 364 aaPredicted RBP16.27■□□□□ 0.2
SSBP1-206ENST00000467681 IFNL1Q8IU54 200 aa16.27■□□□□ 0.2
SSBP1-206ENST00000467681 BRI3BPQ8WY22 251 aa16.27■□□□□ 0.2
SSBP1-206ENST00000467681 PTPN18Q99952 460 aa16.27■□□□□ 0.2
SSBP1-206ENST00000467681 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 CCL15-CCL14A0A0B4J2E2 113 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 FOXN1O15353 648 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 TRPA1O75762 1119 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 GDF11O95390 407 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 HSPD1P10809 573 aaKnown RBP16.26■□□□□ 0.19
SSBP1-206ENST00000467681 MFAP1P55081 439 aaKnown RBP16.26■□□□□ 0.19
SSBP1-206ENST00000467681 CCL15Q16663 113 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 ABCB5Q2M3G0 1257 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 C16orf86Q6ZW13 317 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 SLC44A5Q8NCS7 719 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 WDR18Q9BV38 432 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 NAPBQ9H115 298 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-206ENST00000467681 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
SSBP1-206ENST00000467681 CCDC171Q6TFL3 1326 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 IGF2BP3O00425 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSBP1-206ENST00000467681 ALDH1A1P00352 501 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 GH2P01242 217 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 FGAP02671 866 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 CTCFP49711 727 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-206ENST00000467681 SPP2Q13103 211 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 SHROOM1Q2M3G4 852 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-206ENST00000467681 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-206ENST00000467681 ZNF280CQ8ND82 737 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 CCDC17Q96LX7 622 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 SAGE1Q9NXZ1 904 aa16.25■□□□□ 0.19
SSBP1-206ENST00000467681 MOGSQ13724 837 aa16.24■□□□□ 0.19
SSBP1-206ENST00000467681 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
SSBP1-206ENST00000467681 AS3MTQ9HBK9 375 aa16.24■□□□□ 0.19
SSBP1-206ENST00000467681 A0A0G2JLL6 359 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-206ENST00000467681 TRIM75PA6NK02 468 aa16.23■□□□□ 0.19
SSBP1-206ENST00000467681 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
SSBP1-206ENST00000467681 GUCY1A2P33402 732 aa16.23■□□□□ 0.19
SSBP1-206ENST00000467681 PPARAQ07869 468 aa16.23■□□□□ 0.19
SSBP1-206ENST00000467681 FASTKD5Q7L8L6 764 aaKnown RBP16.23■□□□□ 0.19
SSBP1-206ENST00000467681 PRRT2Q7Z6L0 340 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-206ENST00000467681 SIPA1L1O43166 1804 aa16.23■□□□□ 0.19
SSBP1-206ENST00000467681 BAZ2AQ9UIF9 1905 aaKnown RBP16.23■□□□□ 0.19
SSBP1-206ENST00000467681 OTOFQ9HC10 1997 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 C19orf81C9J6K1 198 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 SLC3A2P08195 630 aaKnown RBP16.22■□□□□ 0.19
SSBP1-206ENST00000467681 HSPA8P11142 646 aaKnown RBP16.22■□□□□ 0.19
SSBP1-206ENST00000467681 AKR1B1P15121 316 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 BACE1P56817 501 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 SEPT2Q15019 361 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 CFHR5Q9BXR6 569 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 MKNK2Q9HBH9 465 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 ZCCHC17Q9NP64 241 aaKnown RBP16.22■□□□□ 0.19
SSBP1-206ENST00000467681 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
SSBP1-206ENST00000467681 THSD7BQ9C0I4 1608 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 MPHOSPH10O00566 681 aaKnown RBP16.21■□□□□ 0.19
SSBP1-206ENST00000467681 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 LBX1P52954 281 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 SH3D19Q5HYK7 790 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 GPAT2Q6NUI2 795 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 TMEM179Q6ZVK1 233 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 STK11IPQ8N1F8 1099 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 DSCC1Q9BVC3 393 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 IL25Q9H293 177 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 R3HDMLQ9H3Y0 253 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 TSKSQ9UJT2 592 aa16.21■□□□□ 0.19
SSBP1-206ENST00000467681 USP17L10C9JJH3 530 aa16.2■□□□□ 0.18
SSBP1-206ENST00000467681 FGRP09769 529 aa16.2■□□□□ 0.18
SSBP1-206ENST00000467681 RASA1P20936 1047 aa16.2■□□□□ 0.18
SSBP1-206ENST00000467681 PDE4BQ07343 736 aa16.2■□□□□ 0.18
SSBP1-206ENST00000467681 SIAH1Q8IUQ4 282 aa16.2■□□□□ 0.18
SSBP1-206ENST00000467681 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
SSBP1-206ENST00000467681 ROBO3Q96MS0 1386 aa16.2■□□□□ 0.18
SSBP1-206ENST00000467681 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 RAD50Q92878 1312 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 SGSM2O43147 1006 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 CTDSPL2Q05D32 466 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
SSBP1-206ENST00000467681 GADL1Q6ZQY3 521 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 ACER1Q8TDN7 264 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.19■□□□□ 0.18
SSBP1-206ENST00000467681 KANSL2Q9H9L4 492 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 INCENPQ9NQS7 918 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 SLC45A1Q9Y2W3 748 aa16.19■□□□□ 0.18
SSBP1-206ENST00000467681 NAV1Q8NEY1 1877 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms