RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 KARSQ15046 597 aaKnown RBP17.68■□□□□ 0.42
CHD1L-205ENST00000467213 HSP90B2PQ58FF3 399 aa17.68■□□□□ 0.42
CHD1L-205ENST00000467213 DESI2Q9BSY9 194 aa17.68■□□□□ 0.42
CHD1L-205ENST00000467213 SERTAD1Q9UHV2 236 aa17.68■□□□□ 0.42
CHD1L-205ENST00000467213 TARSL2A2RTX5 802 aaKnown RBP17.68■□□□□ 0.42
CHD1L-205ENST00000467213 BMP15O95972 392 aa17.68■□□□□ 0.42
CHD1L-205ENST00000467213 RBL2Q08999 1139 aa17.68■□□□□ 0.42
CHD1L-205ENST00000467213 FAM107BQ9H098 131 aa17.68■□□□□ 0.42
CHD1L-205ENST00000467213 SAMSN1Q9NSI8 373 aaKnown RBP17.68■□□□□ 0.42
CHD1L-205ENST00000467213 POLR2DO15514 142 aaKnown RBP17.67■□□□□ 0.42
CHD1L-205ENST00000467213 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 TBC1D10CQ8IV04 446 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 CNNM2Q9H8M5 875 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 VGLL3A8MV65 326 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 FOXN1O15353 648 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 TNNT3P45378 269 aaPredicted RBP17.67■□□□□ 0.42
CHD1L-205ENST00000467213 PIP4K2AP48426 406 aaPredicted RBP17.67■□□□□ 0.42
CHD1L-205ENST00000467213 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 KIF4BQ2VIQ3 1234 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 ISCA1Q9BUE6 129 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 LIMA1Q9UHB6 759 aaKnown RBP17.67■□□□□ 0.42
CHD1L-205ENST00000467213 LCMT1Q9UIC8 334 aa17.67■□□□□ 0.42
CHD1L-205ENST00000467213 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 CORO7P57737 925 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 SPAG1Q07617 926 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 PDE4CQ08493 712 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 MTF1Q14872 753 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 MAP9Q49MG5 647 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 ZNF569Q5MCW4 686 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
CHD1L-205ENST00000467213 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 RUBCNQ92622 972 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 CSF1RP07333 972 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 PRR29P0C7W0 189 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 ZAP70P43403 619 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 STRN4Q9NRL3 753 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 KCPQ6ZWJ8 1503 aa17.66■□□□□ 0.42
CHD1L-205ENST00000467213 SYNRGQ9UMZ2 1314 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 CCDC57Q2TAC2 916 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 CYP26C1Q6V0L0 522 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 PPM1EQ8WY54 764 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 PYM1Q9BRP8 204 aaKnown RBP17.65■□□□□ 0.42
CHD1L-205ENST00000467213 PPFIA4O75335 1185 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 DEXIO95424 95 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 MCM6Q14566 821 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 C10orf67Q8IYJ2 551 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 LZTFL1Q9NQ48 299 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 FAN1Q9Y2M0 1017 aa17.65■□□□□ 0.42
CHD1L-205ENST00000467213 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.42
CHD1L-205ENST00000467213 CCDC196A0A1B0GTZ2 297 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 ARHGAP25P42331 645 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 VSNL1P62760 191 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 TRIM22Q8IYM9 498 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 SLC35F6Q8N357 371 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 TMTC2Q8N394 836 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 PHKBQ93100 1093 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 DISP2A7MBM2 1401 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 PSMD14O00487 310 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 GYPCP04921 128 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 SEMA3FQ13275 785 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 DIS3L2Q8IYB7 885 aaKnown RBP17.64■□□□□ 0.41
CHD1L-205ENST00000467213 FERMT2Q96AC1 680 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 IRX2Q9BZI1 471 aaPredicted RBP17.64■□□□□ 0.41
CHD1L-205ENST00000467213 KRT23Q9C075 422 aa17.64■□□□□ 0.41
CHD1L-205ENST00000467213 TEX33O43247 280 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 TRERF1Q96PN7 1200 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 PUS3Q9BZE2 481 aaKnown RBP17.63■□□□□ 0.41
CHD1L-205ENST00000467213 PUF60Q9UHX1 559 aaKnown RBP17.63■□□□□ 0.41
CHD1L-205ENST00000467213 MYO6Q9UM54 1294 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 TRIM66O15016 1216 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 ADORA1P30542 326 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 CCDC148Q8NFR7 591 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
CHD1L-205ENST00000467213 MYH8P13535 1937 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 MYH6P13533 1939 aa17.63■□□□□ 0.41
CHD1L-205ENST00000467213 CYP27B1O15528 508 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 SHOX2O60902 331 aaPredicted RBP17.62■□□□□ 0.41
CHD1L-205ENST00000467213 PRPF6O94906 941 aaKnown RBP17.62■□□□□ 0.41
CHD1L-205ENST00000467213 GYS2P54840 703 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 DPYDQ12882 1025 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 SCARF1Q14162 830 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 TMEM67Q5HYA8 995 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 LRRC31Q6UY01 552 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 TRAPPC11Q7Z392 1133 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 EFCAB13Q8IY85 973 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 TRMT44Q8IYL2 757 aaKnown RBP17.62■□□□□ 0.41
CHD1L-205ENST00000467213 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
CHD1L-205ENST00000467213 BCORQ6W2J9 1755 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 BTBD18B2RXH4 712 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 PPP1R3GB7ZBB8 358 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 USP14P54578 494 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 CABP4P57796 275 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 ICE2Q659A1 982 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 MICU3Q86XE3 530 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 ABHD10Q9NUJ1 306 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms