RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 IFNKQ9P0W0 207 aa20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 UBE3CQ15386 1083 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 SYNE3Q6ZMZ3 975 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 MICALL1Q8N3F8 863 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 ALG1Q9BT22 464 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 ZSWIM5Q9P217 1185 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 MRFAP1Q9Y605 127 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 SPTLC2O15270 562 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 FGFR2P21802 821 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 ADALQ6DHV7 355 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 APOA5Q6Q788 366 aa20.55■□□□□ 0.88
SNAPC3-205ENST00000467062 ARID4AP29374 1257 aaPredicted RBP20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 KIF23Q02241 960 aaPredicted RBP20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 IFNL3Q8IZI9 196 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 STRCQ7RTU9 1775 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 GOLGA6L9A6NEM1 432 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 ERVV-1B6SEH8 477 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 POTEB2H3BUK9 544 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 SH2B2O14492 632 aaPredicted RBP20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 ERLIN1O75477 346 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 ITPK1Q13572 414 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 MCM6Q14566 821 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 HSP90B2PQ58FF3 399 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 NIP7Q9Y221 180 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 FAN1Q9Y2M0 1017 aa20.54■□□□□ 0.88
SNAPC3-205ENST00000467062 FANCGO15287 622 aa20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 WDHD1O75717 1129 aaPredicted RBP20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 TMEM67Q5HYA8 995 aa20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 IGDCC4Q8TDY8 1250 aa20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 NAPBQ9H115 298 aa20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 SLIT2O94813 1529 aa20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 KCNQ2O43526 872 aa20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 MNAT1P51948 309 aa20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 FAM71BQ8TC56 605 aa20.53■□□□□ 0.88
SNAPC3-205ENST00000467062 NUTM2BA6NNL0 878 aaPredicted RBP20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 NUTM2EB1AL46 878 aaPredicted RBP20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 DPCR1Q3MIW9 517 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 NUTM2AQ8IVF1 878 aaPredicted RBP20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 LCORLQ8N3X6 602 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 BPIFA3Q9BQP9 254 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 UTP14AQ9BVJ6 771 aaKnown RBP20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 ABCA3Q99758 1704 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 RANBP6O60518 1105 aaKnown RBP20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 SLC5A1P13866 664 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 DDB1Q16531 1140 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 KRT40Q6A162 431 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 VPS37DQ86XT2 251 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 ZNF512BQ96KM6 892 aaPredicted RBP20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 DNAJC5Q9H3Z4 198 aa20.52■□□□□ 0.88
SNAPC3-205ENST00000467062 IFIT3O14879 490 aaKnown RBP20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 ERLIN2O94905 339 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 UQCRFS1P1P0C7P4 283 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 BEND6Q5SZJ8 279 aaPredicted RBP20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 ANO1Q5XXA6 986 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 ATL3Q6DD88 541 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 TACO1Q9BSH4 297 aaKnown RBP20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 DISP2A7MBM2 1401 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 ANKRD65E5RJM6 399 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 ZBTB43O43298 467 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 GUCY1A2P33402 732 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 MAP3K12Q12852 859 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 CLIC6Q96NY7 704 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 LY9Q9HBG7 655 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 FAM217BQ9NTX9 383 aaPredicted RBP20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 ABCF2Q9UG63 623 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 ZMYM6O95789 1325 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 MROH5Q6ZUA9 1318 aa20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 MYO5AQ9Y4I1 1855 aaKnown RBP20.51■□□□□ 0.87
SNAPC3-205ENST00000467062 LOC102724428A0A0B4J2F2 783 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 GSG1L2A8MUP6 293 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 PATL2C9JE40 543 aaKnown RBP20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 ZNF202O95125 648 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 SIK1P57059 783 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 MARCH10Q8NA82 808 aaPredicted RBP20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 CNNM3Q8NE01 707 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 ACBD3Q9H3P7 528 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 POLR3EQ9NVU0 708 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 AKAP11Q9UKA4 1901 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 GOLGA8AA7E2F4 631 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 USP5P45974 858 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 GNG11P61952 73 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 SPECC1Q5M775 1068 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 BICDL1Q6ZP65 573 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 SLC26A6Q9BXS9 759 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 SLC4A4Q9Y6R1 1079 aa20.5■□□□□ 0.87
SNAPC3-205ENST00000467062 KCNG4Q8TDN1 519 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 SDR42E1Q8WUS8 393 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 LRP2BPQ9P2M1 347 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 MROH7-TTC4A0A0A0MT08 1334 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 ABCC12Q96J65 1359 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 VWA3AA6NCI4 1184 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 TUBB4BP68371 445 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 C3orf67Q6ZVT6 689 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 ADGRA1Q86SQ6 560 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 ITGB4P16144 1822 aa20.49■□□□□ 0.87
SNAPC3-205ENST00000467062 PFKFB1P16118 471 aa20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 IARSP41252 1262 aaKnown RBP20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 GYG1P46976 350 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms