RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
UBR4-210ENST00000466969 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
UBR4-210ENST00000466969 CYP2C19P33261 490 aa16.06■□□□□ 0.16
UBR4-210ENST00000466969 GCKRQ14397 625 aa16.06■□□□□ 0.16
UBR4-210ENST00000466969 RASIP1Q5U651 963 aa16.06■□□□□ 0.16
UBR4-210ENST00000466969 ANO1Q5XXA6 986 aa16.06■□□□□ 0.16
UBR4-210ENST00000466969 PPP2R2DQ66LE6 453 aa16.06■□□□□ 0.16
UBR4-210ENST00000466969 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
UBR4-210ENST00000466969 LOC285556D6RIA3 1793 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 GFRA3O60609 400 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 TIMP1P01033 207 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 HERVK_113P62684 666 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 ERVK-9P63128 1117 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 ERVK-24P63145 666 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 PSRC1Q6PGN9 363 aaPredicted RBP16.05■□□□□ 0.16
UBR4-210ENST00000466969 ZFPM1Q8IX07 1006 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 TBC1D2Q9BYX2 928 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 MTIF3Q9H2K0 278 aaKnown RBP16.05■□□□□ 0.16
UBR4-210ENST00000466969 MTCH2Q9Y6C9 303 aa16.05■□□□□ 0.16
UBR4-210ENST00000466969 DOCK2Q92608 1830 aa16.04■□□□□ 0.16
UBR4-210ENST00000466969 TMPOP42166 694 aaKnown RBP16.04■□□□□ 0.16
UBR4-210ENST00000466969 LRRC41Q15345 812 aa16.04■□□□□ 0.16
UBR4-210ENST00000466969 Q3C1V9 767 aa16.04■□□□□ 0.16
UBR4-210ENST00000466969 CAVIN4Q5BKX8 364 aa16.04■□□□□ 0.16
UBR4-210ENST00000466969 MFSD5Q6N075 450 aa16.04■□□□□ 0.16
UBR4-210ENST00000466969 TRPV1Q8NER1 839 aa16.04■□□□□ 0.16
UBR4-210ENST00000466969 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
UBR4-210ENST00000466969 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
UBR4-210ENST00000466969 YBX2Q9Y2T7 364 aaKnown RBP16.04■□□□□ 0.16
UBR4-210ENST00000466969 DCDC2CA8MYV0 355 aa16.03■□□□□ 0.16
UBR4-210ENST00000466969 APBB1O00213 710 aa16.03■□□□□ 0.16
UBR4-210ENST00000466969 CYBAP13498 195 aa16.03■□□□□ 0.16
UBR4-210ENST00000466969 POU3F3P20264 500 aaPredicted RBP16.03■□□□□ 0.16
UBR4-210ENST00000466969 PTPN5P54829 565 aa16.03■□□□□ 0.16
UBR4-210ENST00000466969 MAP3K10Q02779 954 aa16.03■□□□□ 0.16
UBR4-210ENST00000466969 C16orf59Q7L2K0 433 aa16.03■□□□□ 0.16
UBR4-210ENST00000466969 MFSD14AQ96MC6 490 aa16.03■□□□□ 0.16
UBR4-210ENST00000466969 RBPJLQ9UBG7 517 aa16.03■□□□□ 0.16
UBR4-210ENST00000466969 ZNF318Q5VUA4 2279 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 ZNF521Q96K83 1311 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 FAAP100Q0VG06 881 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 CCDC57Q2TAC2 916 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 SH3D19Q5HYK7 790 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 WDR78Q5VTH9 848 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 ZNF365Q70YC5 407 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 FBXO33Q7Z6M2 555 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.16
UBR4-210ENST00000466969 TMOD4Q9NZQ9 345 aa16.02■□□□□ 0.16
UBR4-210ENST00000466969 SEPT4O43236 478 aa16.01■□□□□ 0.15
UBR4-210ENST00000466969 DCXO43602 365 aa16.01■□□□□ 0.15
UBR4-210ENST00000466969 ENTPD3O75355 529 aa16.01■□□□□ 0.15
UBR4-210ENST00000466969 SLC5A1P13866 664 aa16.01■□□□□ 0.15
UBR4-210ENST00000466969 HOXA7P31268 230 aaPredicted RBP16.01■□□□□ 0.15
UBR4-210ENST00000466969 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
UBR4-210ENST00000466969 NEUROD2Q15784 382 aa16.01■□□□□ 0.15
UBR4-210ENST00000466969 TMEM199Q8N511 208 aa16.01■□□□□ 0.15
UBR4-210ENST00000466969 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
UBR4-210ENST00000466969 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
UBR4-210ENST00000466969 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
UBR4-210ENST00000466969 SLC15A5A6NIM6 579 aa16■□□□□ 0.15
UBR4-210ENST00000466969 ELL2O00472 640 aaPredicted RBP16■□□□□ 0.15
UBR4-210ENST00000466969 ACRP10323 421 aa16■□□□□ 0.15
UBR4-210ENST00000466969 RGS3P49796 1198 aa16■□□□□ 0.15
UBR4-210ENST00000466969 CASP7P55210 303 aa16■□□□□ 0.15
UBR4-210ENST00000466969 CCNA1P78396 465 aa16■□□□□ 0.15
UBR4-210ENST00000466969 FAM178BQ8IXR5 827 aa16■□□□□ 0.15
UBR4-210ENST00000466969 TOX2Q96NM4 488 aa16■□□□□ 0.15
UBR4-210ENST00000466969 CHMP4AQ9BY43 222 aa16■□□□□ 0.15
UBR4-210ENST00000466969 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
UBR4-210ENST00000466969 AS3MTQ9HBK9 375 aa16■□□□□ 0.15
UBR4-210ENST00000466969 IVNS1ABPQ9Y6Y0 642 aa16■□□□□ 0.15
UBR4-210ENST00000466969 PTPRZ1P23471 2315 aaPredicted RBP15.99■□□□□ 0.15
UBR4-210ENST00000466969 KRT37O76014 449 aa15.99■□□□□ 0.15
UBR4-210ENST00000466969 HOXC6P09630 235 aa15.99■□□□□ 0.15
UBR4-210ENST00000466969 SLURP2P0DP57 97 aa15.99■□□□□ 0.15
UBR4-210ENST00000466969 CSF2RAP15509 400 aa15.99■□□□□ 0.15
UBR4-210ENST00000466969 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
UBR4-210ENST00000466969 HFE2Q6ZVN8 426 aa15.99■□□□□ 0.15
UBR4-210ENST00000466969 OSBPL5Q9H0X9 879 aaPredicted RBP15.99■□□□□ 0.15
UBR4-210ENST00000466969 TRANK1O15050 2925 aa15.99■□□□□ 0.15
UBR4-210ENST00000466969 GBF1Q92538 1859 aa15.99■□□□□ 0.15
UBR4-210ENST00000466969 USP17L5A8MUK1 530 aa15.98■□□□□ 0.15
UBR4-210ENST00000466969 RFXAPO00287 272 aa15.98■□□□□ 0.15
UBR4-210ENST00000466969 PTPREP23469 700 aa15.98■□□□□ 0.15
UBR4-210ENST00000466969 DIXDC1Q155Q3 683 aa15.98■□□□□ 0.15
UBR4-210ENST00000466969 ANKRD33Q7Z3H0 272 aa15.98■□□□□ 0.15
UBR4-210ENST00000466969 NPLOC4Q8TAT6 608 aa15.98■□□□□ 0.15
UBR4-210ENST00000466969 DDTLA6NHG4 134 aaPredicted RBP15.97■□□□□ 0.15
UBR4-210ENST00000466969 RABGGTBP53611 331 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 EPHA10Q5JZY3 1008 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 SH3BP5LQ7L8J4 393 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 RNF180Q86T96 592 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 PRSS33Q8NF86 280 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 ANKS1AQ92625 1134 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 PRRX2Q99811 253 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 IDI2Q9BXS1 227 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 PCDHA11Q9Y5I1 949 aa15.97■□□□□ 0.15
UBR4-210ENST00000466969 ZFHX2Q9C0A1 2572 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms