RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 GCFC2P16383 781 aaKnown RBP17.63■□□□□ 0.41
ABCF3-206ENST00000466742 CASP8Q14790 479 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 FMNL3Q8IVF7 1028 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 TEX11Q8IYF3 940 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 KCNB2Q92953 911 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 XAGE2Q96GT9 111 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 ABCB6Q9NP58 842 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 MROH5Q6ZUA9 1318 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 SHOX2O60902 331 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-206ENST00000466742 RFC4P35249 363 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 GNG11P61952 73 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 SF3B3Q15393 1217 aaKnown RBP17.62■□□□□ 0.41
ABCF3-206ENST00000466742 ZKSCAN8Q15776 578 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-206ENST00000466742 ERFEQ4G0M1 354 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 SRGAP1Q7Z6B7 1085 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 AFAP1L1Q8TED9 768 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 CCDC102AQ96A19 550 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 PPP2R2CQ9Y2T4 447 aa17.62■□□□□ 0.41
ABCF3-206ENST00000466742 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 TMCO5BA8MYB1 307 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 PDE8BO95263 885 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 NBPF9Q3BBW0 867 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 EBAG9O00559 213 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 SSR1P43307 286 aaKnown RBP17.61■□□□□ 0.41
ABCF3-206ENST00000466742 CHMP4BP1P59074 171 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 PREPLQ4J6C6 727 aaPredicted RBP17.61■□□□□ 0.41
ABCF3-206ENST00000466742 BICDL1Q6ZP65 573 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 CTCFLQ8NI51 663 aaPredicted RBP17.61■□□□□ 0.41
ABCF3-206ENST00000466742 DHX58Q96C10 678 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 EDC3Q96F86 508 aaKnown RBP17.61■□□□□ 0.41
ABCF3-206ENST00000466742 SEC31BQ9NQW1 1179 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 CFAP45Q9UL16 551 aa17.61■□□□□ 0.41
ABCF3-206ENST00000466742 LAMB2P55268 1798 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 DDX60Q8IY21 1712 aaKnown RBP17.6■□□□□ 0.41
ABCF3-206ENST00000466742 AARSP49588 968 aaKnown RBP eCLIP17.6■□□□□ 0.41
ABCF3-206ENST00000466742 NMIQ13287 307 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-206ENST00000466742 CRYMQ14894 314 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 KBTBD3Q8NAB2 608 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 JAKMIP1Q96N16 626 aaKnown RBP17.6■□□□□ 0.41
ABCF3-206ENST00000466742 GBP3Q9H0R5 595 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 TPCN1Q9ULQ1 816 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 NEBLO76041 1014 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 PRPF6O94906 941 aaKnown RBP17.6■□□□□ 0.41
ABCF3-206ENST00000466742 IFIT1P09914 478 aaKnown RBP17.6■□□□□ 0.41
ABCF3-206ENST00000466742 RXRBP28702 533 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 ADORA1P30542 326 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 CCAR1Q8IX12 1150 aaKnown RBP17.6■□□□□ 0.41
ABCF3-206ENST00000466742 PNKPQ96T60 521 aa17.6■□□□□ 0.41
ABCF3-206ENST00000466742 CHUKO15111 745 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 ARHGAP6O43182 974 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 CUTAO60888 179 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 INPP5BP32019 993 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 IGHMBP2P38935 993 aaKnown RBP17.59■□□□□ 0.41
ABCF3-206ENST00000466742 ADCK5Q3MIX3 580 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 ENGASEQ8NFI3 743 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 ZKSCAN4Q969J2 545 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-206ENST00000466742 FAM227BQ96M60 508 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 EP400Q96L91 3159 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 PHACTR2O75167 634 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 TUBBP07437 444 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 MRPL12P52815 198 aaKnown RBP17.59■□□□□ 0.41
ABCF3-206ENST00000466742 NAIF1Q69YI7 327 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-206ENST00000466742 TPTE2Q6XPS3 522 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-206ENST00000466742 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-206ENST00000466742 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
ABCF3-206ENST00000466742 VIPAS39Q9H9C1 493 aa17.59■□□□□ 0.41
ABCF3-206ENST00000466742 A0A087WWV3 80 aa17.58■□□□□ 0.41
ABCF3-206ENST00000466742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.58■□□□□ 0.41
ABCF3-206ENST00000466742 RNF40O75150 1001 aa17.58■□□□□ 0.41
ABCF3-206ENST00000466742 RESTQ13127 1097 aa17.58■□□□□ 0.41
ABCF3-206ENST00000466742 PUM3Q15397 648 aaKnown RBP17.58■□□□□ 0.41
ABCF3-206ENST00000466742 TTC39AQ5SRH9 613 aa17.58■□□□□ 0.41
ABCF3-206ENST00000466742 FAM177A1Q8N128 213 aaPredicted RBP17.58■□□□□ 0.41
ABCF3-206ENST00000466742 CEP112Q8N8E3 955 aa17.58■□□□□ 0.41
ABCF3-206ENST00000466742 SUGCTQ9HAC7 445 aa17.58■□□□□ 0.41
ABCF3-206ENST00000466742 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.41
ABCF3-206ENST00000466742 ATXN2Q99700 1313 aaKnown RBP17.58■□□□□ 0.4
ABCF3-206ENST00000466742 A0A0D9SFI3 127 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 FGFR2P21802 821 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 PAX7P23759 505 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 NF2P35240 595 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 TXNRD1Q16881 649 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 WLSQ5T9L3 541 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
ABCF3-206ENST00000466742 TMEM139Q8IV31 216 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 AMOTL1Q8IY63 956 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 PROM2Q8N271 834 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 LPIN2Q92539 896 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 N4BP2L2Q92802 583 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-206ENST00000466742 GOLPH3LQ9H4A5 285 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 COL24A1Q17RW2 1714 aa17.58■□□□□ 0.4
ABCF3-206ENST00000466742 MED23Q9ULK4 1368 aa17.57■□□□□ 0.4
ABCF3-206ENST00000466742 PLSCR1O15162 318 aa17.57■□□□□ 0.4
ABCF3-206ENST00000466742 KINO60870 393 aaKnown RBP17.57■□□□□ 0.4
ABCF3-206ENST00000466742 RDXP35241 583 aaKnown RBP17.57■□□□□ 0.4
ABCF3-206ENST00000466742 CCT5P48643 541 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms