RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 JAG1P78504 1218 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 PPATQ06203 517 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 OTUD5Q96G74 571 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 GINM1Q9NU53 330 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 ASNSP08243 561 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 MAP2K2P36507 400 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 PTH1RQ03431 593 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 CTDSPL2Q05D32 466 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 ABCB5Q2M3G0 1257 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 KIAA1211Q6ZU35 1233 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 ZNF287Q9HBT7 754 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 CTNNA3Q9UI47 895 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 ANAPC4Q9UJX5 808 aa17.2■□□□□ 0.34
DNMT3A-208ENST00000466601 GH2P01242 217 aa17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 KIF23Q02241 960 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 PDE4BQ07343 736 aa17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 PPIL2Q13356 520 aa17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 CCDC17Q96LX7 622 aa17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 ZIC5Q96T25 663 aa17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 CABP5Q9NP86 173 aa17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 ZBTB21Q9ULJ3 1066 aa17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 ZHX2Q9Y6X8 837 aa17.19■□□□□ 0.34
DNMT3A-208ENST00000466601 DOCK1Q14185 1865 aa17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 LAMB1P07942 1786 aa17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 ZNF213O14771 459 aa17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 IRF6O14896 467 aa17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 HAND2P61296 217 aa17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 CCDC84Q86UT8 332 aaPredicted RBP17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 U3KPZ7 1027 aaPredicted RBP17.18■□□□□ 0.34
DNMT3A-208ENST00000466601 MANSC4A6NHS7 340 aaPredicted RBP17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 PRDM1O75626 825 aa17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 AKR1B1P15121 316 aa17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 RASA1P20936 1047 aa17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 IMMTQ16891 758 aaKnown RBP17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 MAP4K1Q92918 833 aa17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 LSG1Q9H089 658 aaKnown RBP17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 AS3MTQ9HBK9 375 aa17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 ANO2Q9NQ90 1003 aa17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 AFG3L2Q9Y4W6 797 aa17.17■□□□□ 0.34
DNMT3A-208ENST00000466601 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 GTF2A2P52657 109 aa17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 SEPT2Q15019 361 aa17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 RAB3GAP1Q15042 981 aa17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 TMEM179Q6ZVK1 233 aa17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 REM2Q8IYK8 340 aaPredicted RBP17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 INCENPQ9NQS7 918 aa17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 KCNH4Q9UQ05 1017 aa17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 TACC3Q9Y6A5 838 aa17.16■□□□□ 0.34
DNMT3A-208ENST00000466601 ATAD5Q96QE3 1844 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 CXCL11O14625 94 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 FGRP09769 529 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 SPP2Q13103 211 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 SNAPC2Q13487 334 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 AKNAD1Q5T1N1 836 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 ZNF280CQ8ND82 737 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 MS4A4AQ96JQ5 239 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 WDR18Q9BV38 432 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 NBPF3Q9H094 633 aa17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 RBM8AQ9Y5S9 174 aaKnown RBP17.15■□□□□ 0.34
DNMT3A-208ENST00000466601 TRIM75PA6NK02 468 aa17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 ORC4O43929 436 aa17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 PCP11498 1178 aaKnown RBP17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 TM4SF4P48230 202 aa17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 INHBEP58166 350 aa17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 SREBF2Q12772 1141 aa17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 TBC1D10CQ8IV04 446 aa17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 RNF41Q9H4P4 317 aaPredicted RBP17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 TOMM22Q9NS69 142 aa17.14■□□□□ 0.33
DNMT3A-208ENST00000466601 MYH8P13535 1937 aa17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 CCL15-CCL14A0A0B4J2E2 113 aa17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 TESPA1A2RU30 521 aaPredicted RBP17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 CETPP11597 493 aa17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 TFAP4Q01664 338 aa17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 MAP2K1Q02750 393 aaPredicted RBP17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 CCL15Q16663 113 aa17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 FAM47AQ5JRC9 791 aa17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 RRP12Q5JTH9 1297 aaKnown RBP17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 THSD7BQ9C0I4 1608 aa17.13■□□□□ 0.33
DNMT3A-208ENST00000466601 A0A0G2JLL6 359 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 USP17L10C9JJH3 530 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 CYP21A2P08686 494 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 TSPY3P0CV98 308 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 TSPY8P0CW00 308 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 PRRT2Q7Z6L0 340 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 NEDD1Q8NHV4 660 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 BRI3BPQ8WY22 251 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms