RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
CXCR4-203ENST00000466288 GPR142Q7Z601 462 aa17.89■□□□□ 0.45
CXCR4-203ENST00000466288 TMOD4Q9NZQ9 345 aa17.89■□□□□ 0.45
CXCR4-203ENST00000466288 LDHCP07864 332 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 GSTO1P78417 241 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 HMG20BQ9P0W2 317 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 PI4KBQ9UBF8 816 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 C19orf81C9J6K1 198 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 ASNSP08243 561 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 MVPQ14764 893 aaKnown RBP17.88■□□□□ 0.45
CXCR4-203ENST00000466288 SHROOM1Q2M3G4 852 aaPredicted RBP17.88■□□□□ 0.45
CXCR4-203ENST00000466288 PI16Q6UXB8 463 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 TBC1D9Q6ZT07 1266 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 PLEKHH3Q7Z736 793 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 TEX11Q8IYF3 940 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 APBA2Q99767 749 aa17.88■□□□□ 0.45
CXCR4-203ENST00000466288 LBHD1Q9BQE6 289 aaPredicted RBP17.88■□□□□ 0.45
CXCR4-203ENST00000466288 SENP6Q9GZR1 1112 aaPredicted RBP17.88■□□□□ 0.45
CXCR4-203ENST00000466288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.88■□□□□ 0.45
CXCR4-203ENST00000466288 ZNF697Q5TEC3 545 aa17.87■□□□□ 0.45
CXCR4-203ENST00000466288 DNAJC18Q9H819 358 aa17.87■□□□□ 0.45
CXCR4-203ENST00000466288 USP17L10C9JJH3 530 aa17.86■□□□□ 0.45
CXCR4-203ENST00000466288 TFCP2Q12800 502 aa17.86■□□□□ 0.45
CXCR4-203ENST00000466288 METTL16Q86W50 562 aaKnown RBP17.86■□□□□ 0.45
CXCR4-203ENST00000466288 SPATA5Q8NB90 893 aa17.86■□□□□ 0.45
CXCR4-203ENST00000466288 SH3RF3Q8TEJ3 882 aaPredicted RBP17.86■□□□□ 0.45
CXCR4-203ENST00000466288 GTF3C2Q8WUA4 911 aaPredicted RBP17.86■□□□□ 0.45
CXCR4-203ENST00000466288 CDX2Q99626 313 aaPredicted RBP17.86■□□□□ 0.45
CXCR4-203ENST00000466288 AKAP2Q9Y2D5 859 aa17.86■□□□□ 0.45
CXCR4-203ENST00000466288 MAP2K5Q13163 448 aa17.85■□□□□ 0.45
CXCR4-203ENST00000466288 ALDH1L2Q3SY69 923 aa17.85■□□□□ 0.45
CXCR4-203ENST00000466288 CCAR1Q8IX12 1150 aaKnown RBP17.85■□□□□ 0.45
CXCR4-203ENST00000466288 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
CXCR4-203ENST00000466288 PAGR1Q9BTK6 254 aa17.85■□□□□ 0.45
CXCR4-203ENST00000466288 DHX36Q9H2U1 1008 aaKnown RBP17.85■□□□□ 0.45
CXCR4-203ENST00000466288 FLRT1Q9NZU1 646 aa17.85■□□□□ 0.45
CXCR4-203ENST00000466288 RAI14Q9P0K7 980 aa17.85■□□□□ 0.45
CXCR4-203ENST00000466288 ATAD5Q96QE3 1844 aa17.85■□□□□ 0.45
CXCR4-203ENST00000466288 ATN1P54259 1190 aaPredicted RBP17.84■□□□□ 0.45
CXCR4-203ENST00000466288 EDC3Q96F86 508 aaKnown RBP17.84■□□□□ 0.45
CXCR4-203ENST00000466288 EMILIN3Q9NT22 766 aa17.84■□□□□ 0.45
CXCR4-203ENST00000466288 DDX20Q9UHI6 824 aaKnown RBP17.84■□□□□ 0.45
CXCR4-203ENST00000466288 GDF11O95390 407 aa17.83■□□□□ 0.45
CXCR4-203ENST00000466288 LPAR1Q92633 364 aa17.83■□□□□ 0.45
CXCR4-203ENST00000466288 NEUROD6Q96NK8 337 aa17.83■□□□□ 0.45
CXCR4-203ENST00000466288 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.45
CXCR4-203ENST00000466288 PRDM6Q9NQX0 595 aa17.83■□□□□ 0.45
CXCR4-203ENST00000466288 GINM1Q9NU53 330 aa17.83■□□□□ 0.45
CXCR4-203ENST00000466288 ZBTB21Q9ULJ3 1066 aa17.83■□□□□ 0.45
CXCR4-203ENST00000466288 HDAC5Q9UQL6 1122 aa17.83■□□□□ 0.45
CXCR4-203ENST00000466288 E9PSI1 815 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 CNMDO75829 334 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 ARID4AP29374 1257 aaPredicted RBP17.82■□□□□ 0.44
CXCR4-203ENST00000466288 MFSD14CQ5VZR4 134 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 FOXP4Q8IVH2 680 aaPredicted RBP17.82■□□□□ 0.44
CXCR4-203ENST00000466288 MAFAQ8NHW3 353 aaPredicted RBP17.82■□□□□ 0.44
CXCR4-203ENST00000466288 MEIS3Q99687 375 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 DNM1LO00429 736 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 RTP1P59025 263 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 SHHQ15465 462 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 AATFQ9NY61 560 aaKnown RBP eCLIP17.82■□□□□ 0.44
CXCR4-203ENST00000466288 RABGAP1Q9Y3P9 1069 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 NDUFB9Q9Y6M9 179 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 SIPA1L1O43166 1804 aa17.82■□□□□ 0.44
CXCR4-203ENST00000466288 FLT1P17948 1338 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 ANP32CO43423 234 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 MSCO60682 206 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 HOXC6P09630 235 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 PTPREP23469 700 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 MCAMP43121 646 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 PPP4CP60510 307 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 MAPK8IP2Q13387 824 aaPredicted RBP17.81■□□□□ 0.44
CXCR4-203ENST00000466288 C9orf50Q5SZB4 431 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 USP17L2Q6R6M4 530 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 MAPKAPK5Q8IW41 473 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 LRP2BPQ9P2M1 347 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 PRKAG2Q9UGJ0 569 aa17.81■□□□□ 0.44
CXCR4-203ENST00000466288 SRGAP3O43295 1099 aa17.8■□□□□ 0.44
CXCR4-203ENST00000466288 IGHA2P01877 340 aa17.8■□□□□ 0.44
CXCR4-203ENST00000466288 CRACR2BQ8N4Y2 399 aaPredicted RBP17.8■□□□□ 0.44
CXCR4-203ENST00000466288 TRPV1Q8NER1 839 aa17.8■□□□□ 0.44
CXCR4-203ENST00000466288 C12orf42Q96LP6 360 aa17.8■□□□□ 0.44
CXCR4-203ENST00000466288 NOL10Q9BSC4 688 aaKnown RBP17.8■□□□□ 0.44
CXCR4-203ENST00000466288 TTYH1Q9H313 450 aaPredicted RBP17.8■□□□□ 0.44
CXCR4-203ENST00000466288 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
CXCR4-203ENST00000466288 PALD1Q9ULE6 856 aa17.8■□□□□ 0.44
CXCR4-203ENST00000466288 SLC15A5A6NIM6 579 aa17.79■□□□□ 0.44
CXCR4-203ENST00000466288 GLRX3O76003 335 aaKnown RBP17.79■□□□□ 0.44
CXCR4-203ENST00000466288 BAG3O95817 575 aa17.79■□□□□ 0.44
CXCR4-203ENST00000466288 CCNA1P78396 465 aa17.79■□□□□ 0.44
CXCR4-203ENST00000466288 SLFN5Q08AF3 891 aa17.79■□□□□ 0.44
CXCR4-203ENST00000466288 GRB14Q14449 540 aa17.79■□□□□ 0.44
CXCR4-203ENST00000466288 GORABQ5T7V8 394 aa17.79■□□□□ 0.44
CXCR4-203ENST00000466288 NPLOC4Q8TAT6 608 aa17.79■□□□□ 0.44
CXCR4-203ENST00000466288 MYLIPQ8WY64 445 aa17.79■□□□□ 0.44
CXCR4-203ENST00000466288 NOB1Q9ULX3 412 aaKnown RBP17.79■□□□□ 0.44
CXCR4-203ENST00000466288 USP17L15C9J2P7 530 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms