RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 PCDHGA10Q9Y5H3 936 aa6.91□□□□□ -1.3
PRKCB-204ENST00000466124 DNAH12Q6ZR08 3092 aa6.91□□□□□ -1.3
PRKCB-204ENST00000466124 TRIM75PA6NK02 468 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 F6X3S4 739 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 TNFRSF10AO00220 468 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 CTNND1O60716 968 aaKnown RBP6.9□□□□□ -1.3
PRKCB-204ENST00000466124 ENTPD3O75355 529 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 PDE8BO95263 885 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
PRKCB-204ENST00000466124 DIXDC1Q155Q3 683 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 METTL24Q5JXM2 366 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 WDR66Q8TBY9 1149 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 KAZALD1Q96I82 304 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 MORF4L1Q9UBU8 362 aa6.9□□□□□ -1.3
PRKCB-204ENST00000466124 LTBP2Q14767 1821 aa6.9□□□□□ -1.31
PRKCB-204ENST00000466124 MYH13Q9UKX3 1938 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 GPR37O15354 613 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 ALDH1L1O75891 902 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 FGFR2P21802 821 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 PRDX5P30044 214 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 PLA2G5P39877 138 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 RGS3P49796 1198 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 SMAD3P84022 425 aaKnown RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 PABPC4Q13310 644 aaKnown RBP eCLIP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 RABL6Q3YEC7 729 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 LRRC24Q50LG9 513 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 TJAP1Q5JTD0 557 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 SH3BP5LQ7L8J4 393 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 CCDC84Q86UT8 332 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 TRMT44Q8IYL2 757 aaKnown RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 SOCS4Q8WXH5 440 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 MYLIPQ8WY64 445 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 SUCLG2Q96I99 432 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 LBHD1Q9BQE6 289 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 TTYH1Q9H313 450 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 ZSWIM6Q9HCJ5 1215 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 USP40Q9NVE5 1235 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 C9orf78Q9NZ63 289 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 LRRFIP2Q9Y608 721 aaKnown RBP6.89□□□□□ -1.31
PRKCB-204ENST00000466124 SALL1Q9NSC2 1324 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 FRMPD3Q5JV73 1810 aa6.89□□□□□ -1.31
PRKCB-204ENST00000466124 UTYO14607 1347 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 GAKO14976 1311 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 IL16Q14005 1332 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 TMEM265A0A087WTH1 108 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 SNPHO15079 494 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 ZMYND10O75800 440 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 IFIT1P09914 478 aaKnown RBP6.88□□□□□ -1.31
PRKCB-204ENST00000466124 FOSL2P15408 326 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 CYP2B6P20813 491 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 CACNB2Q08289 660 aaPredicted RBP6.88□□□□□ -1.31
PRKCB-204ENST00000466124 PUM3Q15397 648 aaKnown RBP6.88□□□□□ -1.31
PRKCB-204ENST00000466124 SH3D19Q5HYK7 790 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 USP6NLQ92738 828 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 NUDT12Q9BQG2 462 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 TBC1D2Q9BYX2 928 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 ASCC2Q9H1I8 757 aaPredicted RBP6.88□□□□□ -1.31
PRKCB-204ENST00000466124 CDHR5Q9HBB8 845 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 RAPGEFL1Q9UHV5 662 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 LHX6Q9UPM6 363 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 NCOR1O75376 2440 aa6.88□□□□□ -1.31
PRKCB-204ENST00000466124 FANCIQ9NVI1 1328 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 DDTLA6NHG4 134 aaPredicted RBP6.87□□□□□ -1.31
PRKCB-204ENST00000466124 VAMP4O75379 141 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 LDHBP07195 334 aaKnown RBP6.87□□□□□ -1.31
PRKCB-204ENST00000466124 SLURP2P0DP57 97 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 ZKSCAN1P17029 563 aaPredicted RBP6.87□□□□□ -1.31
PRKCB-204ENST00000466124 CCND3P30281 292 aaPredicted RBP6.87□□□□□ -1.31
PRKCB-204ENST00000466124 ZEB1P37275 1124 aaPredicted RBP6.87□□□□□ -1.31
PRKCB-204ENST00000466124 FOSBP53539 338 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 SHHQ15465 462 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 C9orf50Q5SZB4 431 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 WWC1Q8IX03 1113 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 ANKRD44Q8N8A2 993 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 ZNF454Q8N9F8 522 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 ZNF280CQ8ND82 737 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 OSBPL5Q9H0X9 879 aaPredicted RBP6.87□□□□□ -1.31
PRKCB-204ENST00000466124 BICC1Q9H694 974 aaKnown RBP6.87□□□□□ -1.31
PRKCB-204ENST00000466124 SLC24A3Q9HC58 644 aa6.87□□□□□ -1.31
PRKCB-204ENST00000466124 DDX4Q9NQI0 724 aaKnown RBP6.87□□□□□ -1.31
PRKCB-204ENST00000466124 NBPF7P0C2Y1 421 aaPredicted RBP6.86□□□□□ -1.31
PRKCB-204ENST00000466124 SLC5A1P13866 664 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 HOXB1P14653 301 aaPredicted RBP6.86□□□□□ -1.31
PRKCB-204ENST00000466124 HOXA7P31268 230 aaPredicted RBP6.86□□□□□ -1.31
PRKCB-204ENST00000466124 RGS2P41220 211 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 HMGCS2P54868 508 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 SPP2Q13103 211 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 PDE3AQ14432 1141 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 CCL14Q16627 93 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 TSR1Q2NL82 804 aaKnown RBP6.86□□□□□ -1.31
PRKCB-204ENST00000466124 MORN1Q5T089 497 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 ZSCAN29Q8IWY8 852 aaPredicted RBP6.86□□□□□ -1.31
PRKCB-204ENST00000466124 LPIN2Q92539 896 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 FAM122AQ96E09 287 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 FAM163AQ96GL9 167 aaPredicted RBP6.86□□□□□ -1.31
PRKCB-204ENST00000466124 APBA2Q99767 749 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 EPAS1Q99814 870 aa6.86□□□□□ -1.31
PRKCB-204ENST00000466124 SRCIN1Q9C0H9 1055 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms