RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 TCP10L2B9ZVM9 353 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 GNAI2P04899 355 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 FGFR2P21802 821 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 CRKP46108 304 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 RNF19BQ6ZMZ0 732 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 ATG9AQ7Z3C6 839 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
ATG3-203ENST00000465980 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 C1orf115Q9H7X2 142 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 SERPINA10Q9UK55 444 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 PPP2R3BQ9Y5P8 575 aa11.59□□□□□ -0.55
ATG3-203ENST00000465980 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
ATG3-203ENST00000465980 TBC1D8O95759 1140 aa11.58□□□□□ -0.56
ATG3-203ENST00000465980 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
ATG3-203ENST00000465980 CACNB3P54284 484 aa11.58□□□□□ -0.56
ATG3-203ENST00000465980 ATP2B3Q16720 1220 aa11.58□□□□□ -0.56
ATG3-203ENST00000465980 SUPT20HL1Q3ZLR7 823 aa11.58□□□□□ -0.56
ATG3-203ENST00000465980 LDLRAD1Q5T700 205 aa11.58□□□□□ -0.56
ATG3-203ENST00000465980 TBC1D22AQ8WUA7 517 aa11.58□□□□□ -0.56
ATG3-203ENST00000465980 HDAC5Q9UQL6 1122 aa11.58□□□□□ -0.56
ATG3-203ENST00000465980 CD46P15529 392 aa11.57□□□□□ -0.56
ATG3-203ENST00000465980 TNFAIP1Q13829 316 aa11.57□□□□□ -0.56
ATG3-203ENST00000465980 LPIN2Q92539 896 aa11.57□□□□□ -0.56
ATG3-203ENST00000465980 TEKT1Q969V4 418 aa11.57□□□□□ -0.56
ATG3-203ENST00000465980 TMEM39BQ9GZU3 492 aa11.57□□□□□ -0.56
ATG3-203ENST00000465980 CEP126Q9P2H0 1117 aa11.57□□□□□ -0.56
ATG3-203ENST00000465980 CIAO1O76071 339 aa11.56□□□□□ -0.56
ATG3-203ENST00000465980 IREB2P48200 963 aaKnown RBP11.56□□□□□ -0.56
ATG3-203ENST00000465980 MMP16P51512 607 aa11.56□□□□□ -0.56
ATG3-203ENST00000465980 SREBF2Q12772 1141 aa11.56□□□□□ -0.56
ATG3-203ENST00000465980 MAP2K5Q13163 448 aa11.56□□□□□ -0.56
ATG3-203ENST00000465980 CEP85Q6P2H3 762 aa11.56□□□□□ -0.56
ATG3-203ENST00000465980 SIRT2Q8IXJ6 389 aa11.56□□□□□ -0.56
ATG3-203ENST00000465980 WNK4Q96J92 1243 aa11.56□□□□□ -0.56
ATG3-203ENST00000465980 KIAA0100Q14667 2235 aaKnown RBP11.56□□□□□ -0.56
ATG3-203ENST00000465980 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
ATG3-203ENST00000465980 USP2O75604 605 aaPredicted RBP11.55□□□□□ -0.56
ATG3-203ENST00000465980 ADORA1P30542 326 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 PHKA1P46020 1223 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 TM4SF4P48230 202 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 TNNI2P48788 182 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 ATP8B2P98198 1209 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 ZNF296Q8WUU4 475 aaPredicted RBP11.55□□□□□ -0.56
ATG3-203ENST00000465980 TEPSINQ96N21 525 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 R3HDMLQ9H3Y0 253 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 ELP3Q9H9T3 547 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 TMOD2Q9NZR1 351 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 MAST3O60307 1309 aa11.55□□□□□ -0.56
ATG3-203ENST00000465980 MYO5AQ9Y4I1 1855 aaKnown RBP11.55□□□□□ -0.56
ATG3-203ENST00000465980 WNT7AO00755 349 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 AXIN1O15169 862 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 SRGAP3O43295 1099 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 HMMRO75330 724 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 GJA5P36382 358 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 IL15P40933 162 aaPredicted RBP11.54□□□□□ -0.56
ATG3-203ENST00000465980 HDLBPQ00341 1268 aaKnown RBP11.54□□□□□ -0.56
ATG3-203ENST00000465980 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
ATG3-203ENST00000465980 SMC5Q8IY18 1101 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 WDR66Q8TBY9 1149 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 ZDHHC15Q96MV8 337 aa11.54□□□□□ -0.56
ATG3-203ENST00000465980 MANSC4A6NHS7 340 aaPredicted RBP11.53□□□□□ -0.56
ATG3-203ENST00000465980 IGF2BP3O00425 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
ATG3-203ENST00000465980 ZBTB48P10074 688 aaPredicted RBP11.53□□□□□ -0.56
ATG3-203ENST00000465980 PRDX5P30044 214 aa11.53□□□□□ -0.56
ATG3-203ENST00000465980 MTX1Q13505 466 aa11.53□□□□□ -0.56
ATG3-203ENST00000465980 APOBEC3HQ6NTF7 200 aaKnown RBP11.53□□□□□ -0.56
ATG3-203ENST00000465980 TREML4Q6UXN2 200 aa11.53□□□□□ -0.56
ATG3-203ENST00000465980 ANKRD13AQ8IZ07 590 aa11.53□□□□□ -0.56
ATG3-203ENST00000465980 GCC1Q96CN9 775 aa11.53□□□□□ -0.56
ATG3-203ENST00000465980 COPRSQ9NQ92 184 aa11.53□□□□□ -0.56
ATG3-203ENST00000465980 GNL3LQ9NVN8 582 aaKnown RBP11.53□□□□□ -0.56
ATG3-203ENST00000465980 DAGLAQ9Y4D2 1042 aa11.53□□□□□ -0.56
ATG3-203ENST00000465980 GPR25O00155 361 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 LDHBP07195 334 aaKnown RBP11.52□□□□□ -0.57
ATG3-203ENST00000465980 TIMM10P62072 90 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 TFCP2Q12800 502 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 VGLL4Q14135 290 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 CCDC102BQ68D86 513 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 SSH3Q8TE77 659 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 OPTNQ96CV9 577 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 DCTPP1Q9H773 170 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.57
ATG3-203ENST00000465980 ZSWIM8A7E2V4 1837 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 A0A1B0GUL7 405 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 TTC24A2A3L6 582 aaPredicted RBP11.51□□□□□ -0.57
ATG3-203ENST00000465980 KDM4AO75164 1064 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 SOX10P56693 466 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 USP46P62068 366 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 TCP10Q12799 353 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 TRIM32Q13049 653 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 LCE2AQ5TA79 106 aaPredicted RBP11.51□□□□□ -0.57
ATG3-203ENST00000465980 HHIPL2Q6UWX4 724 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.51□□□□□ -0.57
ATG3-203ENST00000465980 WRNIP1Q96S55 665 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 CSADQ9Y600 493 aa11.51□□□□□ -0.57
ATG3-203ENST00000465980 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.51□□□□□ -0.57
ATG3-203ENST00000465980 MKI67P46013 3256 aaKnown RBP11.5□□□□□ -0.57
ATG3-203ENST00000465980 PNMA6EA0A0J9YXQ4 647 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms