RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 PPIL2Q13356 520 aa21.93■■□□□ 1.1
HOXA9-203ENST00000465941 SLC44A5Q8NCS7 719 aa21.93■■□□□ 1.1
HOXA9-203ENST00000465941 ROBO3Q96MS0 1386 aa21.93■■□□□ 1.1
HOXA9-203ENST00000465941 BAZ2AQ9UIF9 1905 aaKnown RBP21.92■■□□□ 1.1
HOXA9-203ENST00000465941 MANSC4A6NHS7 340 aaPredicted RBP21.92■■□□□ 1.1
HOXA9-203ENST00000465941 IRF6O14896 467 aa21.92■■□□□ 1.1
HOXA9-203ENST00000465941 INHBEP58166 350 aa21.92■■□□□ 1.1
HOXA9-203ENST00000465941 PPARAQ07869 468 aa21.92■■□□□ 1.1
HOXA9-203ENST00000465941 TBC1D2Q9BYX2 928 aa21.92■■□□□ 1.1
HOXA9-203ENST00000465941 ANAPC4Q9UJX5 808 aa21.92■■□□□ 1.1
HOXA9-203ENST00000465941 ZHX2Q9Y6X8 837 aa21.92■■□□□ 1.1
HOXA9-203ENST00000465941 GDF11O95390 407 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 SLC3A2P08195 630 aaKnown RBP21.91■■□□□ 1.1
HOXA9-203ENST00000465941 TM4SF4P48230 202 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 MAP2K1Q02750 393 aaPredicted RBP21.91■■□□□ 1.1
HOXA9-203ENST00000465941 ABCB5Q2M3G0 1257 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 MS4A4AQ96JQ5 239 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 CCDC17Q96LX7 622 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 ZNF287Q9HBT7 754 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 ZBTB21Q9ULJ3 1066 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 KCNH4Q9UQ05 1017 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 AFG3L2Q9Y4W6 797 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 THSD7BQ9C0I4 1608 aa21.91■■□□□ 1.1
HOXA9-203ENST00000465941 TESPA1A2RU30 521 aaPredicted RBP21.9■■□□□ 1.1
HOXA9-203ENST00000465941 USP17L5A8MUK1 530 aa21.9■■□□□ 1.1
HOXA9-203ENST00000465941 CDC45O75419 566 aa21.9■■□□□ 1.1
HOXA9-203ENST00000465941 GH2P01242 217 aa21.9■■□□□ 1.1
HOXA9-203ENST00000465941 GTF2A2P52657 109 aa21.9■■□□□ 1.1
HOXA9-203ENST00000465941 CABP5Q9NP86 173 aa21.9■■□□□ 1.1
HOXA9-203ENST00000465941 CXCL11O14625 94 aa21.89■■□□□ 1.09
HOXA9-203ENST00000465941 SREBF2Q12772 1141 aa21.89■■□□□ 1.09
HOXA9-203ENST00000465941 SNAPC2Q13487 334 aa21.89■■□□□ 1.09
HOXA9-203ENST00000465941 SHROOM1Q2M3G4 852 aaPredicted RBP21.89■■□□□ 1.09
HOXA9-203ENST00000465941 CASC1Q6TDU7 716 aa21.89■■□□□ 1.09
HOXA9-203ENST00000465941 ESYT1Q9BSJ8 1104 aa21.89■■□□□ 1.09
HOXA9-203ENST00000465941 WDR18Q9BV38 432 aa21.89■■□□□ 1.09
HOXA9-203ENST00000465941 MKNK2Q9HBH9 465 aa21.89■■□□□ 1.09
HOXA9-203ENST00000465941 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.89■■□□□ 1.09
HOXA9-203ENST00000465941 CTNNA3Q9UI47 895 aa21.89■■□□□ 1.09
HOXA9-203ENST00000465941 PDE4BQ07343 736 aa21.88■■□□□ 1.09
HOXA9-203ENST00000465941 AS3MTQ9HBK9 375 aa21.88■■□□□ 1.09
HOXA9-203ENST00000465941 WBP1LQ9NX94 342 aa21.88■■□□□ 1.09
HOXA9-203ENST00000465941 DOCK1Q14185 1865 aa21.88■■□□□ 1.09
HOXA9-203ENST00000465941 CETPP11597 493 aa21.87■■□□□ 1.09
HOXA9-203ENST00000465941 RASA1P20936 1047 aa21.87■■□□□ 1.09
HOXA9-203ENST00000465941 TMEM179Q6ZVK1 233 aa21.87■■□□□ 1.09
HOXA9-203ENST00000465941 CCDC84Q86UT8 332 aaPredicted RBP21.87■■□□□ 1.09
HOXA9-203ENST00000465941 STK11IPQ8N1F8 1099 aa21.87■■□□□ 1.09
HOXA9-203ENST00000465941 ZNF280CQ8ND82 737 aa21.87■■□□□ 1.09
HOXA9-203ENST00000465941 ZNF213O14771 459 aa21.86■■□□□ 1.09
HOXA9-203ENST00000465941 FGRP09769 529 aa21.86■■□□□ 1.09
HOXA9-203ENST00000465941 AKR1B1P15121 316 aa21.86■■□□□ 1.09
HOXA9-203ENST00000465941 GUCY1A2P33402 732 aa21.86■■□□□ 1.09
HOXA9-203ENST00000465941 PTH1RQ03431 593 aa21.86■■□□□ 1.09
HOXA9-203ENST00000465941 CTDSPL2Q05D32 466 aa21.86■■□□□ 1.09
HOXA9-203ENST00000465941 SPP2Q13103 211 aa21.86■■□□□ 1.09
HOXA9-203ENST00000465941 ZNF444Q8N0Y2 327 aaPredicted RBP21.86■■□□□ 1.09
HOXA9-203ENST00000465941 TRIM75PA6NK02 468 aa21.85■■□□□ 1.09
HOXA9-203ENST00000465941 MPHOSPH10O00566 681 aaKnown RBP21.85■■□□□ 1.09
HOXA9-203ENST00000465941 RAB3GAP1Q15042 981 aa21.85■■□□□ 1.09
HOXA9-203ENST00000465941 KIAA1211Q6ZU35 1233 aa21.85■■□□□ 1.09
HOXA9-203ENST00000465941 BRI3BPQ8WY22 251 aa21.85■■□□□ 1.09
HOXA9-203ENST00000465941 MAP4K1Q92918 833 aa21.85■■□□□ 1.09
HOXA9-203ENST00000465941 PTPN18Q99952 460 aa21.85■■□□□ 1.09
HOXA9-203ENST00000465941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.85■■□□□ 1.09
HOXA9-203ENST00000465941 CCL15-CCL14A0A0B4J2E2 113 aa21.84■■□□□ 1.09
HOXA9-203ENST00000465941 A0A0G2JLL6 359 aaPredicted RBP21.84■■□□□ 1.09
HOXA9-203ENST00000465941 PRDM1O75626 825 aa21.84■■□□□ 1.09
HOXA9-203ENST00000465941 PCP11498 1178 aaKnown RBP21.84■■□□□ 1.09
HOXA9-203ENST00000465941 SEPT2Q15019 361 aa21.84■■□□□ 1.09
HOXA9-203ENST00000465941 CCL15Q16663 113 aa21.84■■□□□ 1.09
HOXA9-203ENST00000465941 IMMTQ16891 758 aaKnown RBP21.84■■□□□ 1.09
HOXA9-203ENST00000465941 PRRT2Q7Z6L0 340 aaPredicted RBP21.84■■□□□ 1.09
HOXA9-203ENST00000465941 IFNL1Q8IU54 200 aa21.84■■□□□ 1.09
HOXA9-203ENST00000465941 U3KPZ7 1027 aaPredicted RBP21.84■■□□□ 1.09
HOXA9-203ENST00000465941 LAMB1P07942 1786 aa21.84■■□□□ 1.09
HOXA9-203ENST00000465941 ORC4O43929 436 aa21.83■■□□□ 1.09
HOXA9-203ENST00000465941 HAND2P61296 217 aa21.83■■□□□ 1.09
HOXA9-203ENST00000465941 MOGSQ13724 837 aa21.83■■□□□ 1.09
HOXA9-203ENST00000465941 OTUD7BQ6GQQ9 843 aa21.83■■□□□ 1.09
HOXA9-203ENST00000465941 BEGAINQ9BUH8 593 aa21.83■■□□□ 1.09
HOXA9-203ENST00000465941 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.83■■□□□ 1.09
HOXA9-203ENST00000465941 LSG1Q9H089 658 aaKnown RBP21.83■■□□□ 1.09
HOXA9-203ENST00000465941 NBPF3Q9H094 633 aa21.83■■□□□ 1.09
HOXA9-203ENST00000465941 INCENPQ9NQS7 918 aa21.83■■□□□ 1.09
HOXA9-203ENST00000465941 TACC3Q9Y6A5 838 aa21.83■■□□□ 1.09
HOXA9-203ENST00000465941 C19orf81C9J6K1 198 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 USP17L10C9JJH3 530 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 CA12O43570 354 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 BACE1P56817 501 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 SH3D19Q5HYK7 790 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 AKNAD1Q5T1N1 836 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 FASTKD5Q7L8L6 764 aaKnown RBP21.82■■□□□ 1.08
HOXA9-203ENST00000465941 STAG1Q8WVM7 1258 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 KANSL2Q9H9L4 492 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 SAGE1Q9NXZ1 904 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 ATAD5Q96QE3 1844 aa21.82■■□□□ 1.08
HOXA9-203ENST00000465941 PHIPQ8WWQ0 1821 aa21.81■■□□□ 1.08
HOXA9-203ENST00000465941 IGF2BP3O00425 579 aaKnown RBP eCLIP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms