RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 SIPA1L1O43166 1804 aa12.71□□□□□ -0.38
GPNMB-206ENST00000465673 COL2A1P02458 1487 aaPredicted RBP12.71□□□□□ -0.38
GPNMB-206ENST00000465673 GNAI3P08754 354 aa12.7□□□□□ -0.38
GPNMB-206ENST00000465673 CAPN2P17655 700 aa12.7□□□□□ -0.38
GPNMB-206ENST00000465673 HOXA7P31268 230 aaPredicted RBP12.7□□□□□ -0.38
GPNMB-206ENST00000465673 CACNB2Q08289 660 aaPredicted RBP12.7□□□□□ -0.38
GPNMB-206ENST00000465673 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
GPNMB-206ENST00000465673 PAGR1Q9BTK6 254 aa12.7□□□□□ -0.38
GPNMB-206ENST00000465673 TMOD4Q9NZQ9 345 aa12.7□□□□□ -0.38
GPNMB-206ENST00000465673 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
GPNMB-206ENST00000465673 MAP4K4O95819 1239 aaPredicted RBP12.69□□□□□ -0.38
GPNMB-206ENST00000465673 ASNSP08243 561 aa12.69□□□□□ -0.38
GPNMB-206ENST00000465673 DYNLL1P63167 89 aaKnown RBP12.69□□□□□ -0.38
GPNMB-206ENST00000465673 LHX8Q68G74 356 aa12.69□□□□□ -0.38
GPNMB-206ENST00000465673 NAA16Q6N069 864 aaPredicted RBP12.69□□□□□ -0.38
GPNMB-206ENST00000465673 NUDT12Q9BQG2 462 aa12.69□□□□□ -0.38
GPNMB-206ENST00000465673 DBNDD2Q9BQY9 259 aa12.69□□□□□ -0.38
GPNMB-206ENST00000465673 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
GPNMB-206ENST00000465673 UBE2OQ9C0C9 1292 aaKnown RBP12.69□□□□□ -0.38
GPNMB-206ENST00000465673 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
GPNMB-206ENST00000465673 CUL9Q8IWT3 2517 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 FLT1P17948 1338 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 USP17L10C9JJH3 530 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 CYP2E1P05181 493 aaPredicted RBP12.68□□□□□ -0.38
GPNMB-206ENST00000465673 UQCRFS1P1P0C7P4 283 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 COL6A1P12109 1028 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
GPNMB-206ENST00000465673 G3BP1Q13283 466 aaKnown RBP eCLIP12.68□□□□□ -0.38
GPNMB-206ENST00000465673 ZYXQ15942 572 aaKnown RBP12.68□□□□□ -0.38
GPNMB-206ENST00000465673 LRRC26Q2I0M4 334 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 GPR142Q7Z601 462 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 CRACR2BQ8N4Y2 399 aaPredicted RBP12.68□□□□□ -0.38
GPNMB-206ENST00000465673 USP6NLQ92738 828 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 CLUAP1Q96AJ1 413 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 NOL10Q9BSC4 688 aaKnown RBP12.68□□□□□ -0.38
GPNMB-206ENST00000465673 DHX36Q9H2U1 1008 aaKnown RBP12.68□□□□□ -0.38
GPNMB-206ENST00000465673 PIH1D3Q9NQM4 214 aaKnown RBP12.68□□□□□ -0.38
GPNMB-206ENST00000465673 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
GPNMB-206ENST00000465673 BCAR3O75815 825 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 GNAI2P04899 355 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 CT47B1P0C2W7 299 aaPredicted RBP12.67□□□□□ -0.38
GPNMB-206ENST00000465673 XRCC5P13010 732 aaKnown RBP12.67□□□□□ -0.38
GPNMB-206ENST00000465673 TRIM27P14373 513 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 ZKSCAN1P17029 563 aaPredicted RBP12.67□□□□□ -0.38
GPNMB-206ENST00000465673 ZAP70P43403 619 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 PPP4CP60510 307 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 ERVK-9P63128 1117 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 ERVK-24P63145 666 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 LRIT3Q3SXY7 679 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 MORN1Q5T089 497 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 METTL16Q86W50 562 aaKnown RBP12.67□□□□□ -0.38
GPNMB-206ENST00000465673 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
GPNMB-206ENST00000465673 FLRT1Q9NZU1 646 aa12.67□□□□□ -0.38
GPNMB-206ENST00000465673 C19orf81C9J6K1 198 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 CNMDO75829 334 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 BAG3O95817 575 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 GH2P01242 217 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 MAPK4P31152 587 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 PDE3AQ14432 1141 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 TNNI3KQ59H18 835 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 CCAR1Q8IX12 1150 aaKnown RBP12.66□□□□□ -0.38
GPNMB-206ENST00000465673 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 FRAT1Q92837 279 aaPredicted RBP12.66□□□□□ -0.38
GPNMB-206ENST00000465673 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 FPGT-TNNI3KV9GXZ4 949 aa12.66□□□□□ -0.38
GPNMB-206ENST00000465673 RGS2P41220 211 aa12.65□□□□□ -0.38
GPNMB-206ENST00000465673 GPR153Q6NV75 609 aa12.65□□□□□ -0.38
GPNMB-206ENST00000465673 MIGA1Q8NAN2 632 aa12.65□□□□□ -0.38
GPNMB-206ENST00000465673 TLR7Q9NYK1 1049 aaKnown RBP12.65□□□□□ -0.38
GPNMB-206ENST00000465673 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
GPNMB-206ENST00000465673 MYO5AQ9Y4I1 1855 aaKnown RBP12.65□□□□□ -0.38
GPNMB-206ENST00000465673 CDK5RAP2Q96SN8 1893 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 PLCG2P16885 1265 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 CYP7A1P22680 504 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
GPNMB-206ENST00000465673 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 WDR78Q5VTH9 848 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L2Q6R6M4 530 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 ACER1Q8TDN7 264 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 APBA2Q99767 749 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 SENP6Q9GZR1 1112 aaPredicted RBP12.64□□□□□ -0.39
GPNMB-206ENST00000465673 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
GPNMB-206ENST00000465673 EVX2Q03828 476 aa12.63□□□□□ -0.39
GPNMB-206ENST00000465673 MAP2K5Q13163 448 aa12.63□□□□□ -0.39
GPNMB-206ENST00000465673 OS9Q13438 667 aaPredicted RBP12.63□□□□□ -0.39
GPNMB-206ENST00000465673 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
GPNMB-206ENST00000465673 ATF7IPQ6VMQ6 1270 aa12.63□□□□□ -0.39
GPNMB-206ENST00000465673 TRMT44Q8IYL2 757 aaKnown RBP12.63□□□□□ -0.39
GPNMB-206ENST00000465673 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
GPNMB-206ENST00000465673 NPLOC4Q8TAT6 608 aa12.63□□□□□ -0.39
GPNMB-206ENST00000465673 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
GPNMB-206ENST00000465673 CCDC8Q9H0W5 538 aaPredicted RBP12.63□□□□□ -0.39
GPNMB-206ENST00000465673 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
GPNMB-206ENST00000465673 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms