RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 GDF11O95390 407 aa17.36■□□□□ 0.37
ATG4B-214ENST00000465399 ZAP70P43403 619 aa17.36■□□□□ 0.37
ATG4B-214ENST00000465399 METTL16Q86W50 562 aaKnown RBP17.36■□□□□ 0.37
ATG4B-214ENST00000465399 DNAJC18Q9H819 358 aa17.36■□□□□ 0.37
ATG4B-214ENST00000465399 MORF4L1Q9UBU8 362 aa17.36■□□□□ 0.37
ATG4B-214ENST00000465399 DBNLQ9UJU6 430 aaKnown RBP17.36■□□□□ 0.37
ATG4B-214ENST00000465399 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
ATG4B-214ENST00000465399 NOP58Q9Y2X3 529 aaKnown RBP17.36■□□□□ 0.37
ATG4B-214ENST00000465399 DDX60LQ5H9U9 1706 aaKnown RBP17.35■□□□□ 0.37
ATG4B-214ENST00000465399 USP17L10C9JJH3 530 aa17.35■□□□□ 0.37
ATG4B-214ENST00000465399 HOXA7P31268 230 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-214ENST00000465399 CERS3Q8IU89 383 aa17.35■□□□□ 0.37
ATG4B-214ENST00000465399 CRISPLD2Q9H0B8 497 aa17.35■□□□□ 0.37
ATG4B-214ENST00000465399 PIH1D3Q9NQM4 214 aaKnown RBP17.35■□□□□ 0.37
ATG4B-214ENST00000465399 SAP30BPQ9UHR5 308 aaKnown RBP17.35■□□□□ 0.37
ATG4B-214ENST00000465399 ZBTB21Q9ULJ3 1066 aa17.35■□□□□ 0.37
ATG4B-214ENST00000465399 NAV1Q8NEY1 1877 aa17.35■□□□□ 0.37
ATG4B-214ENST00000465399 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-214ENST00000465399 IDH1O75874 414 aaKnown RBP17.34■□□□□ 0.37
ATG4B-214ENST00000465399 CYP7A1P22680 504 aa17.34■□□□□ 0.37
ATG4B-214ENST00000465399 RPTORQ8N122 1335 aa17.34■□□□□ 0.37
ATG4B-214ENST00000465399 ANKLE1Q8NAG6 615 aa17.34■□□□□ 0.37
ATG4B-214ENST00000465399 PAWRQ96IZ0 340 aaKnown RBP17.34■□□□□ 0.37
ATG4B-214ENST00000465399 HMX1Q9NP08 348 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-214ENST00000465399 TLR7Q9NYK1 1049 aaKnown RBP17.34■□□□□ 0.37
ATG4B-214ENST00000465399 GJD2Q9UKL4 321 aa17.34■□□□□ 0.37
ATG4B-214ENST00000465399 SZT2Q5T011 3432 aa17.33■□□□□ 0.37
ATG4B-214ENST00000465399 RANBP2P49792 3224 aaKnown RBP17.33■□□□□ 0.37
ATG4B-214ENST00000465399 USP5P45974 858 aa17.33■□□□□ 0.36
ATG4B-214ENST00000465399 HERVK_113P62684 666 aa17.33■□□□□ 0.36
ATG4B-214ENST00000465399 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.36
ATG4B-214ENST00000465399 JAG1P78504 1218 aa17.33■□□□□ 0.36
ATG4B-214ENST00000465399 HNRNPUQ00839 825 aaKnown RBP eCLIP17.33■□□□□ 0.36
ATG4B-214ENST00000465399 NECAB2Q7Z6G3 386 aa17.33■□□□□ 0.36
ATG4B-214ENST00000465399 GPRC5AQ8NFJ5 357 aa17.33■□□□□ 0.36
ATG4B-214ENST00000465399 GTF3C2Q8WUA4 911 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-214ENST00000465399 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
ATG4B-214ENST00000465399 P2RX7Q99572 595 aaKnown RBP17.33■□□□□ 0.36
ATG4B-214ENST00000465399 CCDC8Q9H0W5 538 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-214ENST00000465399 MYH8P13535 1937 aa17.33■□□□□ 0.36
ATG4B-214ENST00000465399 PDE3AQ14432 1141 aa17.32■□□□□ 0.36
ATG4B-214ENST00000465399 SHROOM1Q2M3G4 852 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-214ENST00000465399 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
ATG4B-214ENST00000465399 MIGA1Q8NAN2 632 aa17.32■□□□□ 0.36
ATG4B-214ENST00000465399 EAF2Q96CJ1 260 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-214ENST00000465399 NUDT12Q9BQG2 462 aa17.32■□□□□ 0.36
ATG4B-214ENST00000465399 RLBP1P12271 317 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 CYP2B6P20813 491 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 MAPK4P31152 587 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 MAP3K12Q12852 859 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 ERC1Q8IUD2 1116 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 MAGEB6Q8N7X4 407 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 TRIB2Q92519 343 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 PRO3102Q9H379 93 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
ATG4B-214ENST00000465399 A0A1W2PPC1 479 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 GH2P01242 217 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 ERVK-9P63128 1117 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 ERVK-24P63145 666 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 TRIM32Q13049 653 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 TMED8Q6PL24 325 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-214ENST00000465399 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 DIS3LQ8TF46 1054 aaKnown RBP17.3■□□□□ 0.36
ATG4B-214ENST00000465399 FEZ1Q99689 392 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 PAGR1Q9BTK6 254 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 EHD4Q9H223 541 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 TXNRD2Q9NNW7 524 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 SERPINB13Q9UIV8 391 aa17.3■□□□□ 0.36
ATG4B-214ENST00000465399 PEX10O60683 326 aa17.29■□□□□ 0.36
ATG4B-214ENST00000465399 XRCC5P13010 732 aaKnown RBP17.29■□□□□ 0.36
ATG4B-214ENST00000465399 PRKAR2AP13861 404 aaKnown RBP17.29■□□□□ 0.36
ATG4B-214ENST00000465399 TATDN1Q6P1N9 297 aa17.29■□□□□ 0.36
ATG4B-214ENST00000465399 AACSQ86V21 672 aa17.29■□□□□ 0.36
ATG4B-214ENST00000465399 TRMT44Q8IYL2 757 aaKnown RBP17.29■□□□□ 0.36
ATG4B-214ENST00000465399 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
ATG4B-214ENST00000465399 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
ATG4B-214ENST00000465399 EMILIN3Q9NT22 766 aa17.29■□□□□ 0.36
ATG4B-214ENST00000465399 NDUFB9Q9Y6M9 179 aa17.29■□□□□ 0.36
ATG4B-214ENST00000465399 ZKSCAN1P17029 563 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-214ENST00000465399 ZYXQ15942 572 aaKnown RBP17.28■□□□□ 0.36
ATG4B-214ENST00000465399 TTC6Q86TZ1 520 aa17.28■□□□□ 0.36
ATG4B-214ENST00000465399 RBPJLQ9UBG7 517 aa17.28■□□□□ 0.36
ATG4B-214ENST00000465399 EXOC6BQ9Y2D4 811 aa17.28■□□□□ 0.36
ATG4B-214ENST00000465399 RGS2P41220 211 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 USP14P54578 494 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 RAB3GAP1Q15042 981 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 CERKLQ49MI3 558 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-214ENST00000465399 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 MAP3K21Q5TCX8 1036 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 GPR142Q7Z601 462 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 C7orf61Q8IZ16 206 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 C12orf42Q96LP6 360 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 PORCNQ9H237 461 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 C11orf49Q9H6J7 331 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 ANTXR1Q9H6X2 564 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 OGDHLQ9ULD0 1010 aa17.27■□□□□ 0.36
ATG4B-214ENST00000465399 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms