RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TRPV1Q8NER1 839 aa18.67■□□□□ 0.58
HDAC6-214ENST00000465269 PPM1EQ8WY54 764 aa18.67■□□□□ 0.58
HDAC6-214ENST00000465269 DDX20Q9UHI6 824 aaKnown RBP18.67■□□□□ 0.58
HDAC6-214ENST00000465269 REV3LO60673 3130 aa18.67■□□□□ 0.58
HDAC6-214ENST00000465269 MAPK4P31152 587 aa18.66■□□□□ 0.58
HDAC6-214ENST00000465269 EPHB4P54760 987 aa18.66■□□□□ 0.58
HDAC6-214ENST00000465269 TRIM60Q495X7 471 aa18.66■□□□□ 0.58
HDAC6-214ENST00000465269 CCAR1Q8IX12 1150 aaKnown RBP18.66■□□□□ 0.58
HDAC6-214ENST00000465269 TRMT44Q8IYL2 757 aaKnown RBP18.66■□□□□ 0.58
HDAC6-214ENST00000465269 FAM122AQ96E09 287 aa18.66■□□□□ 0.58
HDAC6-214ENST00000465269 GNL3LQ9NVN8 582 aaKnown RBP18.66■□□□□ 0.58
HDAC6-214ENST00000465269 DENND2AQ9ULE3 1009 aa18.66■□□□□ 0.58
HDAC6-214ENST00000465269 MROH7-TTC4A0A0A0MT08 1334 aa18.66■□□□□ 0.58
HDAC6-214ENST00000465269 XIRP2A4UGR9 3374 aa18.65■□□□□ 0.58
HDAC6-214ENST00000465269 TRIM43BA6NCK2 446 aa18.65■□□□□ 0.58
HDAC6-214ENST00000465269 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
HDAC6-214ENST00000465269 CYP2C19P33261 490 aa18.65■□□□□ 0.58
HDAC6-214ENST00000465269 RASGRF1Q13972 1273 aa18.65■□□□□ 0.58
HDAC6-214ENST00000465269 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
HDAC6-214ENST00000465269 TRIM43Q96BQ3 446 aaPredicted RBP18.65■□□□□ 0.58
HDAC6-214ENST00000465269 TMOD4Q9NZQ9 345 aa18.65■□□□□ 0.58
HDAC6-214ENST00000465269 RLFQ13129 1914 aa18.64■□□□□ 0.58
HDAC6-214ENST00000465269 ITGB8P26012 769 aa18.64■□□□□ 0.57
HDAC6-214ENST00000465269 HOXA7P31268 230 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-214ENST00000465269 BACE1P56817 501 aa18.64■□□□□ 0.57
HDAC6-214ENST00000465269 MECOMQ03112 1051 aa18.64■□□□□ 0.57
HDAC6-214ENST00000465269 MAP2K5Q13163 448 aa18.64■□□□□ 0.57
HDAC6-214ENST00000465269 WDR78Q5VTH9 848 aa18.64■□□□□ 0.57
HDAC6-214ENST00000465269 SLC39A5Q6ZMH5 540 aa18.64■□□□□ 0.57
HDAC6-214ENST00000465269 PDLIM7Q9NR12 457 aa18.64■□□□□ 0.57
HDAC6-214ENST00000465269 DNM1LO00429 736 aa18.63■□□□□ 0.57
HDAC6-214ENST00000465269 MFSD14CQ5VZR4 134 aa18.63■□□□□ 0.57
HDAC6-214ENST00000465269 CCDC102BQ68D86 513 aa18.63■□□□□ 0.57
HDAC6-214ENST00000465269 LPAR1Q92633 364 aa18.63■□□□□ 0.57
HDAC6-214ENST00000465269 EDC3Q96F86 508 aaKnown RBP18.63■□□□□ 0.57
HDAC6-214ENST00000465269 FAM163AQ96GL9 167 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-214ENST00000465269 USP44Q9H0E7 712 aa18.63■□□□□ 0.57
HDAC6-214ENST00000465269 CWC22Q9HCG8 908 aaKnown RBP18.63■□□□□ 0.57
HDAC6-214ENST00000465269 GPR75-ASB3A0A0A6YYF3 556 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 CNMDO75829 334 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 GDF11O95390 407 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 MAP3K12Q12852 859 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 NPLOC4Q8TAT6 608 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 FERMT2Q96AC1 680 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 RNPC3Q96LT9 517 aaKnown RBP18.62■□□□□ 0.57
HDAC6-214ENST00000465269 WDR18Q9BV38 432 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 AS3MTQ9HBK9 375 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 MYO9BQ13459 2157 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 CHD7Q9P2D1 2997 aa18.62■□□□□ 0.57
HDAC6-214ENST00000465269 SIPA1L1O43166 1804 aa18.61■□□□□ 0.57
HDAC6-214ENST00000465269 CEP126Q9P2H0 1117 aa18.61■□□□□ 0.57
HDAC6-214ENST00000465269 PA2G4Q9UQ80 394 aaKnown RBP18.61■□□□□ 0.57
HDAC6-214ENST00000465269 SEMA3EO15041 775 aa18.6■□□□□ 0.57
HDAC6-214ENST00000465269 PI16Q6UXB8 463 aa18.6■□□□□ 0.57
HDAC6-214ENST00000465269 TBC1D9Q6ZT07 1266 aa18.6■□□□□ 0.57
HDAC6-214ENST00000465269 ZGPATQ8N5A5 531 aaKnown RBP18.6■□□□□ 0.57
HDAC6-214ENST00000465269 ADAMTS19Q8TE59 1207 aa18.6■□□□□ 0.57
HDAC6-214ENST00000465269 NECAB3Q96P71 396 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-214ENST00000465269 TBC1D2Q9BYX2 928 aa18.6■□□□□ 0.57
HDAC6-214ENST00000465269 DNAJC18Q9H819 358 aa18.6■□□□□ 0.57
HDAC6-214ENST00000465269 EMILIN3Q9NT22 766 aa18.6■□□□□ 0.57
HDAC6-214ENST00000465269 DNAJB2P25686 324 aa18.59■□□□□ 0.57
HDAC6-214ENST00000465269 ADCYAP1R1P41586 468 aa18.59■□□□□ 0.57
HDAC6-214ENST00000465269 TIMM10P62072 90 aa18.59■□□□□ 0.57
HDAC6-214ENST00000465269 ATP2B2Q01814 1243 aa18.59■□□□□ 0.57
HDAC6-214ENST00000465269 ZYXQ15942 572 aaKnown RBP18.59■□□□□ 0.57
HDAC6-214ENST00000465269 SLF2Q8IX21 1173 aa18.59■□□□□ 0.57
HDAC6-214ENST00000465269 HOXD11P31277 338 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-214ENST00000465269 TLE2Q04725 743 aa18.58■□□□□ 0.56
HDAC6-214ENST00000465269 WDR63Q8IWG1 891 aa18.58■□□□□ 0.56
HDAC6-214ENST00000465269 TEX11Q8IYF3 940 aa18.58■□□□□ 0.56
HDAC6-214ENST00000465269 SH3RF3Q8TEJ3 882 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-214ENST00000465269 USP17L10C9JJH3 530 aa18.57■□□□□ 0.56
HDAC6-214ENST00000465269 CYBAP13498 195 aa18.57■□□□□ 0.56
HDAC6-214ENST00000465269 PTPREP23469 700 aa18.57■□□□□ 0.56
HDAC6-214ENST00000465269 CCDC85BQ15834 202 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-214ENST00000465269 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
HDAC6-214ENST00000465269 UHRF1Q96T88 793 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-214ENST00000465269 ZNF576Q9H609 170 aa18.57■□□□□ 0.56
HDAC6-214ENST00000465269 KBTBD13C9JR72 458 aa18.56■□□□□ 0.56
HDAC6-214ENST00000465269 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
HDAC6-214ENST00000465269 ASNSP08243 561 aa18.56■□□□□ 0.56
HDAC6-214ENST00000465269 SNX17Q15036 470 aa18.56■□□□□ 0.56
HDAC6-214ENST00000465269 PRAMEF19Q5SWL8 479 aa18.56■□□□□ 0.56
HDAC6-214ENST00000465269 SPTY2D1Q68D10 685 aaPredicted RBP18.56■□□□□ 0.56
HDAC6-214ENST00000465269 ASB2Q96Q27 587 aa18.56■□□□□ 0.56
HDAC6-214ENST00000465269 PRDM12Q9H4Q4 367 aa18.56■□□□□ 0.56
HDAC6-214ENST00000465269 BTBD7Q9P203 1132 aa18.56■□□□□ 0.56
HDAC6-214ENST00000465269 HERC5Q9UII4 1024 aaKnown RBP18.56■□□□□ 0.56
HDAC6-214ENST00000465269 PIEZO1Q92508 2521 aa18.56■□□□□ 0.56
HDAC6-214ENST00000465269 SLC15A5A6NIM6 579 aa18.55■□□□□ 0.56
HDAC6-214ENST00000465269 MSCO60682 206 aa18.55■□□□□ 0.56
HDAC6-214ENST00000465269 MRPL50Q8N5N7 158 aaKnown RBP18.55■□□□□ 0.56
HDAC6-214ENST00000465269 NSUN4Q96CB9 384 aaKnown RBP18.55■□□□□ 0.56
HDAC6-214ENST00000465269 ZBTB21Q9ULJ3 1066 aa18.55■□□□□ 0.56
HDAC6-214ENST00000465269 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-214ENST00000465269 GRXCR1A8MXD5 290 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 C19orf81C9J6K1 198 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 CIAO1O76071 339 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 PBX2P40425 430 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms