RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
LIMD1-203ENST00000465039 WDR18Q9BV38 432 aa16.36■□□□□ 0.21
LIMD1-203ENST00000465039 AS3MTQ9HBK9 375 aa16.36■□□□□ 0.21
LIMD1-203ENST00000465039 ZBTB21Q9ULJ3 1066 aa16.36■□□□□ 0.21
LIMD1-203ENST00000465039 PHIPQ8WWQ0 1821 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 IRF6O14896 467 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 FOXP2O15409 715 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 AOC2O75106 756 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 CHMLP26374 656 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 GRM1Q13255 1194 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 OTUD7BQ6GQQ9 843 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 CWC27Q6UX04 472 aaKnown RBP16.35■□□□□ 0.21
LIMD1-203ENST00000465039 MS4A4AQ96JQ5 239 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 ANAPC4Q9UJX5 808 aa16.35■□□□□ 0.21
LIMD1-203ENST00000465039 FAM196BA6NMK8 535 aa16.34■□□□□ 0.21
LIMD1-203ENST00000465039 USP17L5A8MUK1 530 aa16.34■□□□□ 0.21
LIMD1-203ENST00000465039 HSPD1P10809 573 aaKnown RBP16.34■□□□□ 0.21
LIMD1-203ENST00000465039 GJA5P36382 358 aa16.34■□□□□ 0.21
LIMD1-203ENST00000465039 CERKLQ49MI3 558 aaPredicted RBP16.34■□□□□ 0.21
LIMD1-203ENST00000465039 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
LIMD1-203ENST00000465039 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
LIMD1-203ENST00000465039 ZNF589Q86UQ0 364 aaPredicted RBP16.34■□□□□ 0.21
LIMD1-203ENST00000465039 AFG3L2Q9Y4W6 797 aa16.34■□□□□ 0.21
LIMD1-203ENST00000465039 PTPRFP10586 1907 aa16.34■□□□□ 0.21
LIMD1-203ENST00000465039 LAMA4Q16363 1823 aa16.33■□□□□ 0.21
LIMD1-203ENST00000465039 PDE4BQ07343 736 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 ABCB5Q2M3G0 1257 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 CCDC129Q6ZRS4 1044 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 ZNF280CQ8ND82 737 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 CABP5Q9NP86 173 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 CTNNA3Q9UI47 895 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 SLC45A1Q9Y2W3 748 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 ZHX2Q9Y6X8 837 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 PLIN4Q96Q06 1357 aa16.33■□□□□ 0.2
LIMD1-203ENST00000465039 A0A0G2JLL6 359 aaPredicted RBP16.32■□□□□ 0.2
LIMD1-203ENST00000465039 LOC285556D6RIA3 1793 aa16.32■□□□□ 0.2
LIMD1-203ENST00000465039 CYP2D6P10635 497 aa16.32■□□□□ 0.2
LIMD1-203ENST00000465039 CDK8P49336 464 aa16.32■□□□□ 0.2
LIMD1-203ENST00000465039 PPARAQ07869 468 aa16.32■□□□□ 0.2
LIMD1-203ENST00000465039 CASC1Q6TDU7 716 aa16.32■□□□□ 0.2
LIMD1-203ENST00000465039 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
LIMD1-203ENST00000465039 PRRT2Q7Z6L0 340 aaPredicted RBP16.32■□□□□ 0.2
LIMD1-203ENST00000465039 PROCA1Q8NCQ7 364 aaPredicted RBP16.32■□□□□ 0.2
LIMD1-203ENST00000465039 GREB1LQ9C091 1923 aaPredicted RBP16.32■□□□□ 0.2
LIMD1-203ENST00000465039 SYNPO2Q9UMS6 1093 aa16.32■□□□□ 0.2
LIMD1-203ENST00000465039 CCL15-CCL14A0A0B4J2E2 113 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 SGSM2O43147 1006 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 GH2P01242 217 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 FGAP02671 866 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 FGRP09769 529 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 RRP1BQ14684 758 aaKnown RBP16.31■□□□□ 0.2
LIMD1-203ENST00000465039 CCL15Q16663 113 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 SH3D19Q5HYK7 790 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 PPP4R3BQ5MIZ7 849 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 IFNL1Q8IU54 200 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 BRI3BPQ8WY22 251 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 ZIC5Q96T25 663 aa16.31■□□□□ 0.2
LIMD1-203ENST00000465039 CYP2D7A0A087X1C5 515 aa16.3■□□□□ 0.2
LIMD1-203ENST00000465039 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
LIMD1-203ENST00000465039 ORC4O43929 436 aa16.3■□□□□ 0.2
LIMD1-203ENST00000465039 CDC45O75419 566 aa16.3■□□□□ 0.2
LIMD1-203ENST00000465039 HSPA1AP0DMV8 641 aaKnown RBP16.3■□□□□ 0.2
LIMD1-203ENST00000465039 HSPA1BP0DMV9 641 aaKnown RBP16.3■□□□□ 0.2
LIMD1-203ENST00000465039 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
LIMD1-203ENST00000465039 SLC4A8Q2Y0W8 1093 aa16.3■□□□□ 0.2
LIMD1-203ENST00000465039 ANKRD23Q86SG2 305 aa16.3■□□□□ 0.2
LIMD1-203ENST00000465039 SH2D4AQ9H788 454 aa16.3■□□□□ 0.2
LIMD1-203ENST00000465039 GDF11O95390 407 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 RASA1P20936 1047 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
LIMD1-203ENST00000465039 USP14P54578 494 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 BACE1P56817 501 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 SLC44A5Q8NCS7 719 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 DYNLL2Q96FJ2 89 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 C12orf42Q96LP6 360 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 KIAA1683Q9H0B3 1180 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 RNF41Q9H4P4 317 aaPredicted RBP16.29■□□□□ 0.2
LIMD1-203ENST00000465039 KANSL2Q9H9L4 492 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 MKNK2Q9HBH9 465 aa16.29■□□□□ 0.2
LIMD1-203ENST00000465039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.29■□□□□ 0.2
LIMD1-203ENST00000465039 USP17L10C9JJH3 530 aa16.28■□□□□ 0.2
LIMD1-203ENST00000465039 IGF2BP3O00425 579 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIMD1-203ENST00000465039 MKRN3Q13064 507 aaKnown RBP16.28■□□□□ 0.2
LIMD1-203ENST00000465039 SPP2Q13103 211 aa16.28■□□□□ 0.2
LIMD1-203ENST00000465039 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIMD1-203ENST00000465039 MOGSQ13724 837 aa16.28■□□□□ 0.2
LIMD1-203ENST00000465039 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
LIMD1-203ENST00000465039 TRIM75PA6NK02 468 aa16.27■□□□□ 0.2
LIMD1-203ENST00000465039 JAG1P78504 1218 aa16.27■□□□□ 0.2
LIMD1-203ENST00000465039 EVX2Q03828 476 aa16.27■□□□□ 0.2
LIMD1-203ENST00000465039 IMMTQ16891 758 aaKnown RBP16.27■□□□□ 0.2
LIMD1-203ENST00000465039 ZNF444Q8N0Y2 327 aaPredicted RBP16.27■□□□□ 0.2
LIMD1-203ENST00000465039 STAG1Q8WVM7 1258 aa16.27■□□□□ 0.2
LIMD1-203ENST00000465039 PTPN18Q99952 460 aa16.27■□□□□ 0.2
LIMD1-203ENST00000465039 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
LIMD1-203ENST00000465039 ARHGEF10LQ9HCE6 1279 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms