RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 MRPL41Q8IXM3 137 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 FAM169BQ8N8A8 192 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 C19orf47Q8N9M1 422 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 HNRNPLLQ8WVV9 542 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 FAM46AQ96IP4 442 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 LNPKQ9C0E8 428 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 OSBPL2Q9H1P3 480 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 ACSS3Q9H6R3 686 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 TJP2Q9UDY2 1190 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 PCOLCE2Q9UKZ9 415 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 SLC12A7Q9Y666 1083 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 SLC22A31A6NKX4 558 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 RAG1P15918 1043 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 CAP2P40123 477 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 MAP7Q14244 749 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 PPP2R5EQ16537 467 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 ARSHQ5FYA8 562 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 CDCP2Q5VXM1 449 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 SLFN12Q8IYM2 578 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 PHACTR4Q8IZ21 702 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 UTP4Q969X6 686 aaKnown RBP5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 ATG4CQ96DT6 458 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 MYRFLQ96LU7 910 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 ANTXR1Q9H6X2 564 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 FBRSQ9HAH7 460 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 DAGLAQ9Y4D2 1042 aa5.6□□□□□ -1.51
HMGXB4-205ENST00000464480 TNFRSF10CO14798 259 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 KLF4O43474 513 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 LRIG2O94898 1065 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 NME1P15531 152 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 CASP7P55210 303 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 RAB33AQ14088 237 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 INTS3Q68E01 1043 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 CDPF1Q6NVV7 123 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 DZIP1LQ8IYY4 767 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 MEGF10Q96KG7 1140 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 UBL7Q96S82 380 aaPredicted RBP5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 CNNM2Q9H8M5 875 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 SIRPGQ9P1W8 387 aa5.59□□□□□ -1.51
HMGXB4-205ENST00000464480 C1QTNF9BB2RNN3 333 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 CHURC1-FNTBB4DL54 471 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 DNAJA2O60884 412 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 CST3P01034 146 aaPredicted RBP5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 BMP3P12645 472 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 RXRBP28702 533 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 CCNFP41002 786 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 SLBPQ14493 270 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 NFE2L2Q16236 605 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 FXNQ16595 210 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 NKG7Q16617 165 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 CCDC144BQ3MJ40 725 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 SGO2Q562F6 1265 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 PRAMEF13Q5VWM6 474 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 RUFY4Q6ZNE9 571 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 TTC6Q86TZ1 520 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 MFSD2AQ8NA29 543 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 CYB5D2Q8WUJ1 264 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 EZH1Q92800 747 aaPredicted RBP5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 DPH2Q9BQC3 489 aaPredicted RBP5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 FOXQ1Q9C009 403 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 SEMA6CQ9H3T2 930 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 ZSWIM4Q9H7M6 989 aa5.58□□□□□ -1.52
HMGXB4-205ENST00000464480 A0A1W2PQH9 124 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 UPK3BL1B0FP48 263 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 UPK3BL2E5RIL1 263 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 K7ELQ4 463 aaPredicted RBP5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 DHX15O43143 795 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 MAP4P27816 1152 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 CHRNA4P43681 627 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 GATA4P43694 442 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 CHMP4BP1P59074 171 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 SERINC3Q13530 473 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 LARP1BQ659C4 914 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 ARMCX6Q7L4S7 300 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 UBE3DQ7Z6J8 389 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 CD163Q86VB7 1156 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 FBLIM1Q8WUP2 373 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 MKL1Q969V6 931 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 CCDC74BQ96LY2 380 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 KCNF1Q9H3M0 494 aa5.57□□□□□ -1.52
HMGXB4-205ENST00000464480 FAM95CA0A1B0GW59 222 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 PROCP04070 461 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 NFICP08651 508 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 ACRP10323 421 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 GBP1P32455 592 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 DDR2Q16832 855 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 PAOXQ6QHF9 649 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 UNC5AQ6ZN44 842 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 FAM20CQ8IXL6 584 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 ARMC10Q8N2F6 343 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 GIMAP7Q8NHV1 300 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 XAGE3Q8WTP9 111 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 MRFAP1L1Q96HT8 127 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 KIF2CQ99661 725 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 TNKS2Q9H2K2 1166 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 PHAXQ9H814 394 aaKnown RBP5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 MAPK8IP1Q9UQF2 711 aa5.56□□□□□ -1.52
HMGXB4-205ENST00000464480 RGS13O14921 159 aa5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 POLR2BP30876 1174 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms