RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 GRIN3BO60391 1043 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 RNGTTO60942 597 aaKnown RBP6.77□□□□□ -1.33
USP9X-204ENST00000463829 ATF4P18848 351 aaPredicted RBP6.77□□□□□ -1.33
USP9X-204ENST00000463829 ETF1P62495 437 aaKnown RBP6.77□□□□□ -1.33
USP9X-204ENST00000463829 NFKBIBQ15653 356 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 PAOXQ6QHF9 649 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 CDC37L1Q7L3B6 337 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 KCT2Q8NC54 265 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 ZNF507Q8TCN5 953 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 GMLQ99445 158 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 EHMT1Q9H9B1 1298 aa6.77□□□□□ -1.33
USP9X-204ENST00000463829 SSU72Q9NP77 194 aaKnown RBP6.77□□□□□ -1.33
USP9X-204ENST00000463829 POLR3KQ9Y2Y1 108 aaPredicted RBP6.77□□□□□ -1.33
USP9X-204ENST00000463829 FAM95CA0A1B0GW59 222 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 ATE1O95260 518 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 HCLS1P14317 486 aaPredicted RBP6.76□□□□□ -1.33
USP9X-204ENST00000463829 DNAJA1P31689 397 aaKnown RBP6.76□□□□□ -1.33
USP9X-204ENST00000463829 GRK4P32298 578 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 SOX9P48436 509 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
USP9X-204ENST00000463829 SGO2Q562F6 1265 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 GK5Q6ZS86 529 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 SMYD4Q8IYR2 804 aaPredicted RBP6.76□□□□□ -1.33
USP9X-204ENST00000463829 ACSS3Q9H6R3 686 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 PCOLCE2Q9UKZ9 415 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 PCDHB14Q9Y5E9 798 aa6.76□□□□□ -1.33
USP9X-204ENST00000463829 ADAMTS4O75173 837 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 HTR3BO95264 441 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 PGRP06401 933 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 NEFMP07197 916 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 PLCG1P19174 1290 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 RAB6AP20340 208 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 NTF4P34130 210 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 NASPP49321 788 aaPredicted RBP6.75□□□□□ -1.33
USP9X-204ENST00000463829 CLCQ05315 142 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 MLECQ14165 292 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 HID1Q8IV36 788 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 FBLIM1Q8WUP2 373 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 EZH1Q92800 747 aaPredicted RBP6.75□□□□□ -1.33
USP9X-204ENST00000463829 ISL2Q96A47 359 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 METTL22Q9BUU2 404 aaPredicted RBP6.75□□□□□ -1.33
USP9X-204ENST00000463829 ADAM30Q9UKF2 790 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 CORINQ9Y5Q5 1042 aa6.75□□□□□ -1.33
USP9X-204ENST00000463829 NFICP08651 508 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 IMPDH2P12268 514 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 MAP7Q14244 749 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 TMEM201Q5SNT2 666 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP9X-204ENST00000463829 FERD3LQ96RJ6 166 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP9X-204ENST00000463829 SEMA6CQ9H3T2 930 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 PRKAG2Q9UGJ0 569 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 STRIP2Q9ULQ0 834 aa6.74□□□□□ -1.33
USP9X-204ENST00000463829 F13BP05160 661 aa6.73□□□□□ -1.33
USP9X-204ENST00000463829 FOSL1P15407 271 aa6.73□□□□□ -1.33
USP9X-204ENST00000463829 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
USP9X-204ENST00000463829 SF3A1Q15459 793 aaKnown RBP6.73□□□□□ -1.33
USP9X-204ENST00000463829 LRRFIP1Q32MZ4 808 aaKnown RBP6.73□□□□□ -1.33
USP9X-204ENST00000463829 MCATQ8IVS2 390 aaKnown RBP6.73□□□□□ -1.33
USP9X-204ENST00000463829 CPLX3Q8WVH0 158 aa6.73□□□□□ -1.33
USP9X-204ENST00000463829 CRBNQ96SW2 442 aa6.73□□□□□ -1.33
USP9X-204ENST00000463829 TANGO6Q9C0B7 1094 aa6.73□□□□□ -1.33
USP9X-204ENST00000463829 ZNRF3Q9ULT6 936 aa6.73□□□□□ -1.33
USP9X-204ENST00000463829 PPT2Q9UMR5 302 aa6.73□□□□□ -1.33
USP9X-204ENST00000463829 DAGLAQ9Y4D2 1042 aa6.73□□□□□ -1.33
USP9X-204ENST00000463829 SSBP05455 408 aaKnown RBP eCLIP6.72□□□□□ -1.33
USP9X-204ENST00000463829 FBXW10Q5XX13 1052 aa6.72□□□□□ -1.33
USP9X-204ENST00000463829 SLC6A19Q695T7 634 aa6.72□□□□□ -1.33
USP9X-204ENST00000463829 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
USP9X-204ENST00000463829 ACSF2Q96CM8 615 aaPredicted RBP6.72□□□□□ -1.33
USP9X-204ENST00000463829 FBXL18Q96ME1 805 aa6.72□□□□□ -1.33
USP9X-204ENST00000463829 SRRTQ9BXP5 876 aaKnown RBP6.72□□□□□ -1.33
USP9X-204ENST00000463829 FBRSQ9HAH7 460 aa6.72□□□□□ -1.33
USP9X-204ENST00000463829 TJP2Q9UDY2 1190 aa6.72□□□□□ -1.33
USP9X-204ENST00000463829 ADGRE2Q9UHX3 823 aa6.72□□□□□ -1.33
USP9X-204ENST00000463829 CYP26A1O43174 497 aa6.71□□□□□ -1.34
USP9X-204ENST00000463829 FGRP09769 529 aa6.71□□□□□ -1.34
USP9X-204ENST00000463829 ATP2B1P20020 1258 aa6.71□□□□□ -1.34
USP9X-204ENST00000463829 CAP2P40123 477 aa6.71□□□□□ -1.34
USP9X-204ENST00000463829 YARSP54577 528 aaKnown RBP6.71□□□□□ -1.34
USP9X-204ENST00000463829 EIF6P56537 245 aaKnown RBP6.71□□□□□ -1.34
USP9X-204ENST00000463829 SLBPQ14493 270 aaKnown RBP eCLIP6.71□□□□□ -1.34
USP9X-204ENST00000463829 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
USP9X-204ENST00000463829 MRPL41Q8IXM3 137 aaKnown RBP6.71□□□□□ -1.34
USP9X-204ENST00000463829 RBBP8NLQ8NC74 664 aaPredicted RBP6.71□□□□□ -1.34
USP9X-204ENST00000463829 TMEM87BQ96K49 555 aa6.71□□□□□ -1.34
USP9X-204ENST00000463829 TBC1D32Q96NH3 1257 aa6.71□□□□□ -1.34
USP9X-204ENST00000463829 LGR6Q9HBX8 967 aa6.71□□□□□ -1.34
USP9X-204ENST00000463829 SLC22A31A6NKX4 558 aa6.7□□□□□ -1.34
USP9X-204ENST00000463829 LRIG2O94898 1065 aa6.7□□□□□ -1.34
USP9X-204ENST00000463829 NKG7Q16617 165 aa6.7□□□□□ -1.34
USP9X-204ENST00000463829 DUSP27Q5VZP5 1158 aa6.7□□□□□ -1.34
USP9X-204ENST00000463829 CCDC81Q6ZN84 652 aa6.7□□□□□ -1.34
USP9X-204ENST00000463829 UBE3DQ7Z6J8 389 aa6.7□□□□□ -1.34
USP9X-204ENST00000463829 VSIG10LQ86VR7 867 aa6.7□□□□□ -1.34
USP9X-204ENST00000463829 TP53INP2Q8IXH6 220 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms